Heatmap: Cluster_202 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - - - - -12.91 - - - 3.26 4.18 -0.35 1.13 - - - - - - - - - - -0.25 - - - 0.55 -3.0 - - -0.63 - - - -0.31 -1.63 1.79 - 1.71 1.54 1.59 -1.11 - - - -
- - - - -0.64 3.9 - 0.7 - - - - - - - - 3.78 2.98 - - - - - - - 3.2 - - - - - - - - - - - - - - - - - - - - - -
- -0.31 -1.05 -2.34 -4.36 1.82 3.43 3.01 - -1.02 0.4 0.24 -1.08 -1.22 -0.98 -0.18 1.07 0.62 -2.71 -2.41 -4.63 -3.25 - -0.1 -1.11 1.79 0.6 -0.87 -1.41 -1.39 -0.39 -1.36 -1.2 -1.21 0.06 -0.75 -0.51 -2.55 -3.3 -2.73 -2.14 -1.92 -1.83 -1.49 -2.11 -1.81 -1.55 -1.85
- 2.21 1.26 - - - - - - - 1.84 3.08 1.26 0.93 -0.92 3.09 - - - - - - - - 2.41 - 2.05 1.33 - 0.6 1.07 - - - - - - - - - - - - - - - - -
- - -0.02 2.79 2.48 - 1.8 3.67 1.39 - - - - - -2.05 1.22 1.75 - - - - - - - - 3.15 - - - -0.19 - - - - - - - - - - - - - - - - - -
- - - - 0.86 4.7 3.29 2.11 - - - - 1.63 - - - - - - - - - - - 1.57 - - - - - - - - - - - - - - - - - - - - - - -
- 0.15 -1.21 2.36 1.33 0.0 2.83 2.27 2.14 0.73 -1.71 - -1.49 -2.56 -1.7 - 0.22 -1.06 - - -2.51 -1.39 - -1.68 -1.69 2.86 -0.1 - - -2.11 -0.03 -2.94 - -3.5 - - - -0.34 - -0.09 -0.75 -3.68 0.52 -4.13 -2.63 -0.86 0.56 -2.87
- - - 1.95 1.81 3.62 - 1.64 - 2.21 - - - - - - 1.38 - - - 3.2 - - - 1.57 - - - - - - - - - - - - - - - - - - - - 2.53 - -
- -2.92 -0.8 -3.63 -2.99 3.24 2.89 3.58 - -1.83 -3.01 -2.73 -1.93 -1.59 -0.96 0.11 0.53 0.63 - -1.64 -2.1 -1.22 - -0.86 -0.55 1.73 -1.05 -1.55 -0.48 -1.55 -1.49 -3.15 -1.72 -1.37 -1.7 -2.24 -1.4 -2.94 -1.66 -1.26 -2.46 -2.18 -1.07 -1.33 -1.95 -2.53 -2.83 -1.39
- - -3.51 -3.86 -5.02 2.85 2.44 3.53 -1.92 -1.68 -2.23 -1.52 -0.21 1.82 -0.83 -5.4 -1.77 -2.58 -1.26 -1.52 -0.97 1.02 -1.19 0.26 -0.9 -3.56 -0.51 -2.29 0.41 -0.75 0.07 -1.48 -2.99 -1.18 -4.16 -5.73 -2.33 -3.03 -4.68 -2.04 0.25 0.67 0.33 -2.93 -6.47 -2.24 -3.38 0.57
-1.53 1.15 1.66 0.95 - -0.95 1.56 3.36 1.41 -1.52 1.17 1.63 - - -4.35 - -1.6 0.31 - -1.14 - - - 0.72 -1.5 3.17 -0.08 - -0.75 -0.62 - - - - - - - -0.51 - - -0.65 - - - - 0.73 - -
- - - 0.92 2.1 4.5 2.29 - - 0.24 1.08 - - - -2.3 1.71 - - - - - - - - - 1.09 0.8 - - - - - 0.38 - - - - - - - - - - - - - 1.27 -
- - -1.11 0.19 0.45 4.48 2.54 3.87 - - - - - - - - 0.48 - - - - - - - -0.31 - - - - - - - - - - - - - - - - - - - - - - -
- - -0.45 -1.17 - 3.59 3.4 2.19 - -0.73 -0.81 -0.59 -1.2 - -4.05 - -0.82 -0.46 - 0.85 - - - -0.51 -0.59 0.65 -0.62 -0.63 0.41 -0.57 -0.78 -0.98 -1.58 -1.93 - -0.89 -0.17 -1.69 - -0.64 -0.82 - -1.46 - -1.78 -0.63 -1.39 0.79
- - - - 0.51 4.02 2.39 3.32 - 1.07 - 2.24 - - - - - - - - - - - - - - - - - -3.54 - -0.63 -0.17 -0.1 - - - - - 0.78 - - - 0.48 0.9 -0.45 - -
-0.2 1.6 -0.23 -0.71 -1.55 1.04 2.96 1.97 1.93 -2.75 -4.65 -4.11 -1.97 - -3.3 0.58 1.58 2.82 2.15 1.04 0.47 -1.65 -1.97 -0.37 -1.47 0.32 -2.45 -3.55 -1.2 -4.11 -1.87 - -5.09 -5.01 - - - -3.13 - -3.88 - -4.43 -3.32 - -5.02 -3.81 -3.29 -2.63
- - - - -2.46 3.59 3.29 3.15 - -2.88 -4.51 -2.39 0.57 1.22 -2.39 1.82 -4.54 - -3.39 - - 0.24 - -3.82 -0.95 0.17 -3.17 -4.1 0.23 -1.94 0.29 -1.0 -5.55 -3.01 -4.86 - -4.6 -3.65 - - -1.69 -2.3 -0.64 -3.71 - - - 0.39
- -3.88 -1.4 0.63 -4.28 2.78 3.1 2.59 -1.6 -1.87 -1.65 -1.27 -2.03 -0.63 -1.69 2.44 -2.0 -2.42 - -2.04 -3.86 -1.3 - -1.0 -1.64 0.53 -4.57 -0.18 1.3 -0.76 -0.36 -0.36 -0.85 -0.47 -0.86 -0.65 -0.98 -2.72 -1.3 -0.63 -1.1 -1.73 -1.23 -3.68 -2.14 -0.95 -1.25 -0.05
- 2.52 1.38 2.04 1.58 3.6 2.0 - - - - - - - - 1.42 -0.11 0.78 2.04 0.34 - 0.29 - - - 1.93 - - - - - - - -0.45 - - - - - - - - - - - - - -
- - - - - 4.44 4.71 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.84 4.96 3.68 1.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.34 -0.86 - 0.76 3.99 3.87 3.03 - - - - - - - - - -1.36 - 1.21 0.41 0.61 - - 0.17 - - - - - - - - - - - - - - - - - - - - - - -
- - 0.66 1.98 - 0.89 1.98 3.84 - -0.47 - - - - -0.83 - 1.82 - - - - - - - - 3.81 - - - -0.57 -0.02 - -0.16 - -0.08 - - - - - - - - - - - - -
- - - - - 4.52 4.02 3.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.4 - - - - 2.73 - 3.66 1.05 - - 3.08 1.37 - - - - - - - - - 1.09 1.64 - - - - - - - - - - - 1.87 - - 1.87 - - - - 0.84
- - - - - 4.84 3.22 3.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.95 - - - - - - - 1.67 3.83 - - - - 2.01 2.54 - - - - - - - 2.72 - 1.77 1.49 0.28 - 1.52 - - - - - - - - - - - - - - - -
- - - 2.97 - 5.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 2.33 4.19 2.2 - - 3.82 2.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.03 1.73 1.47 0.05 2.71 3.35 1.52 - -1.23 - -1.41 - - -2.19 2.56 1.51 -1.83 - -0.69 - 0.27 1.37 - - 1.41 -1.07 - - -3.68 -1.73 - - - - - - - - - - -0.9 - - - -1.24 - -1.69
0.34 -2.3 1.15 1.41 -5.07 -0.64 2.97 2.16 1.71 -0.39 - - -1.21 -3.22 -2.0 0.26 -0.9 1.79 1.04 0.57 0.6 0.32 -1.26 -0.75 -1.49 2.87 -3.17 -1.17 -2.68 -1.79 -3.25 -2.31 -4.52 -3.67 - -4.56 -3.57 -1.95 -5.0 -2.54 -4.41 -3.25 -3.66 -1.39 -3.49 -1.76 -0.83 -3.02
- - - - - - - - - - - 5.12 - - - - - - - - - - - - - - - 2.35 - - - - 1.53 2.42 - - - - - - - - - - - - - -
- - - - - - 4.03 - - - - 4.98 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.01 -0.19 0.24 -1.21 0.92 2.8 2.32 - -0.29 -0.44 0.09 0.07 - 0.04 - 1.5 1.14 - 0.28 -2.36 -0.27 - - 2.26 1.6 0.41 0.9 0.26 -2.03 -1.12 -0.29 -1.73 -1.27 - -1.16 -1.64 -2.61 -0.55 -2.9 -1.3 - -1.07 -0.84 -1.87 -2.32 -0.82 -0.95
- -2.24 - - 0.35 3.02 2.94 2.72 - -0.11 -3.0 -0.1 0.15 0.06 -5.09 - - - 0.84 1.49 -0.29 -1.06 -0.42 - -3.01 - -0.75 -2.75 -0.79 -1.93 -1.25 -2.1 -1.2 -1.08 -1.53 -2.8 -0.42 1.21 -0.95 -0.64 - -0.46 -0.0 0.1 -0.92 0.66 -1.48 -3.22
0.07 -0.09 -2.52 -1.79 -3.4 3.28 2.4 3.64 - -1.54 - - -1.7 -1.68 -0.72 1.39 0.25 1.09 - - -2.2 -1.49 - 2.26 -1.13 0.54 -4.46 -1.23 - -1.28 -1.55 -3.07 -3.11 -2.42 -2.5 - -4.36 -4.1 -3.96 -4.73 - -2.33 -4.21 -1.67 -2.97 -3.64 -2.11 -2.31
- - - - - 1.74 3.56 3.35 - - 3.61 2.41 - 1.27 - - 1.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.6 0.84 - -0.39 3.13 - 3.27 3.6 - - - - - - - - 1.48 - - - - - 3.4 - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.37 - - - - - - - 1.97 - 3.25 - - - - - - - - - - - - - - - 2.23 - - - - 1.41 1.73 - - - - - 2.47 - - 2.46 - - 2.95 - -
- - - - - 3.98 3.88 3.01 - 0.37 - - 0.09 - - - - - - - - - - - - - - -0.11 -0.8 -1.18 -0.8 - - - -0.56 - - 0.71 - - - - - 0.24 0.18 - - -
- - - - 0.46 3.45 4.36 3.93 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.83 - 3.34 - - - 3.35 3.58 - - - - - - - - 1.94 - - - 0.11 - 0.67 - 1.27 -2.74 - - - - - - - - - - 1.0 - - - - - - 0.11
- - - 0.31 -1.34 4.04 3.27 3.99 - -2.96 - - -2.6 - - -1.65 - - - - - - - 0.3 -2.07 -2.27 - - - -4.52 - - - - - -0.88 - - -1.61 - -0.77 - - - - -1.8 -2.08 -2.97
- - 0.24 - - 1.59 3.88 2.2 - - - - - - -2.72 1.55 1.3 3.42 - 1.98 - - - - 0.45 - - - - - - - - - - - 1.53 - - - - - - - - - - -
- 2.44 -0.16 - - 1.19 3.29 3.63 - - - - - - -3.12 - 2.49 -0.15 - - - - 2.98 1.01 - - - - - -0.47 - - - - - - - - - - - - - - - - - -
- - - - 2.69 - - - - - - 4.97 3.36 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.49 -1.36 -0.3 0.1 2.07 3.53 0.49 -0.03 -2.04 - - 0.97 2.47 -1.77 2.28 0.64 - 1.91 -0.4 - 0.33 -1.85 - -1.65 1.37 -1.95 - - -4.58 -0.58 - - - - - - - - - - -3.06 - - - - - -1.92
- 1.49 -1.36 -0.3 0.1 2.07 3.53 0.49 -0.03 -2.04 - - 0.97 2.47 -1.77 2.28 0.64 - 1.91 -0.4 - 0.33 -1.85 - -1.65 1.37 -1.95 - - -4.58 -0.58 - - - - - - - - - - -3.06 - - - - - -1.92
- -0.08 - - -1.59 2.38 3.36 -0.13 - -0.14 3.0 2.59 - -0.36 -5.12 1.22 0.8 - - - - 0.64 - -0.38 - -0.49 - - 2.23 -1.45 -0.98 - -1.42 - -0.71 - - - - - - - -0.07 - - - - -
- - - - - 2.59 - - - 0.67 2.84 3.13 - - - 3.55 2.89 1.25 - - - - - - - - - - - - - - - - - - - - - - - - - 1.55 - - - -
-0.1 -2.09 -2.75 -2.8 0.64 3.29 3.4 3.11 -0.68 -2.52 -3.73 - -1.6 -4.58 -4.46 2.84 -2.22 -4.44 - -0.97 -1.81 -3.73 - -0.65 - - -4.69 0.9 -0.05 -3.43 -1.11 -5.03 -3.18 -3.44 -2.64 -1.6 -2.91 -3.02 -4.19 -2.36 -4.36 -2.02 -1.66 -1.94 - -2.88 -4.37 -4.09
0.82 -0.1 -0.22 -0.43 0.06 2.15 2.8 1.93 0.62 -0.33 -0.24 -0.52 -0.2 -0.53 -0.34 0.52 0.25 -0.42 -0.99 -0.63 -0.89 -0.48 -1.25 -1.98 -0.45 0.04 -0.64 -0.37 -0.87 -0.95 -0.3 -0.12 -0.92 -1.21 -1.59 -1.54 0.1 -0.33 -1.28 -0.86 -1.1 -1.49 -0.76 -0.73 -0.93 -0.27 -1.1 -0.98
-2.24 1.51 0.88 2.22 -0.88 -0.71 3.24 2.81 -1.15 -5.42 - - - - -5.96 0.84 1.12 -0.64 - -2.53 -3.4 - 2.77 -1.84 -3.31 2.57 - 0.79 -1.83 -4.26 - - - - - - - -4.54 - - - -4.57 - - - -4.26 -4.54 -5.3
- - 2.35 - - - 1.67 - - - 1.21 2.43 - - 1.06 - 1.64 - - 1.71 1.32 2.99 - 0.03 0.1 1.41 - - 0.6 -1.09 -0.06 - -2.41 - -0.09 - - - - - - - - - - -0.13 -1.64 1.61
- - - - - 4.95 2.12 3.68 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.28 - - - - - 1.65 - - 4.16 - - - - 3.42 - - - 1.73 1.8 - - - 1.6 - - - -1.48 - - 0.36 - - - - - - - - - - - - - - -
- - - - - - - - - 3.06 2.94 3.18 1.57 - -1.66 - 2.89 - - - - - - - - 1.98 - - - - 0.88 - - - - - - - - - - - 2.31 - - - - 0.57
- - - - - 2.7 3.52 0.19 - - 3.04 3.63 - - - - - - - - - - - 0.08 - 0.14 - 1.36 -0.23 -2.34 - - -1.06 - - - - -0.18 - - - - - - - -0.17 - -2.03
- - - - - 3.68 2.93 2.04 - - - - - - - - - - - - - - - - 3.65 - 2.75 - 2.05 - - - - - - - - - - - - - - - - - - -
- - - - 0.33 3.95 4.58 2.88 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.86 -3.88 -2.2 3.25 2.94 2.43 - -1.22 0.51 0.29 -0.18 -0.46 -1.45 - -1.61 -1.4 1.41 -0.34 -0.87 - - -0.71 0.34 0.17 0.61 0.22 -0.02 -0.92 -0.66 0.07 -2.1 -1.92 -0.52 -3.56 -1.33 -1.76 -2.88 -0.54 - -3.2 -3.12 -1.31 -1.54 -2.3 -2.2 -0.83
-4.07 -2.37 -1.21 -2.29 -3.53 2.7 2.17 2.74 -3.07 -0.41 0.81 0.1 -1.35 -1.55 -0.22 -1.42 -0.12 -0.01 -5.01 -1.06 -1.6 -1.15 -4.18 -0.21 0.56 0.73 1.21 -0.66 -1.2 -0.17 0.32 0.66 -0.28 -0.16 -1.23 -1.5 0.13 -1.35 -1.37 -1.07 -0.54 -0.35 -1.23 -1.17 -0.91 -1.32 -0.59 -0.99
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.88 - - 4.23 2.23 - - - - - - - -1.1 - 2.89 - - - - - - - - - 1.61 - 2.65 - - - - - - - - - - - - - - - - - - -
-5.13 -0.13 -3.42 -8.71 0.83 2.54 -3.27 0.81 -11.59 1.03 -2.39 -2.47 0.66 -20.64 0.91 -1.05 1.87 -6.24 0.47 0.37 2.79 2.16 -13.86 0.37 -1.29 -1.59 -1.35 -6.6 -5.29 -1.16 -0.16 -2.37 -1.97 -3.72 -6.41 -3.76 -3.59 -9.14 -3.13 0.9 -4.71 -0.83 1.06 1.29 -1.33 -0.67 -0.4 -4.57
- -2.93 -1.39 -1.35 -1.29 3.37 4.41 3.43 - - -1.05 -0.58 - - -4.08 - - -3.7 - - - - - -1.92 -1.91 -3.1 -2.94 -0.99 - -1.12 -3.85 - -2.45 - -3.33 - -3.07 - - - - - - - -2.55 -3.11 -2.92 -1.33
- - - 2.2 - - 3.89 4.0 - - - - - - - - - - - - - - - - - 3.65 - - - - - - - - - - - - - - - - - - - - - -
-2.43 0.88 -0.53 -0.92 -1.73 3.48 3.17 3.4 -0.6 -3.11 -4.55 - -2.75 -4.49 -0.6 0.98 -0.7 0.28 - - -4.67 -3.62 -3.36 1.43 -2.63 1.36 -2.3 -2.43 -5.94 -1.84 -2.72 -2.07 -3.36 -3.84 -3.45 -1.83 -1.92 - - -3.67 -2.91 -3.36 -5.07 - -3.77 -5.53 -4.14 -1.84
- - - - 0.63 2.58 3.43 1.96 - - - - - - - - - 3.34 - - - - 3.14 2.79 - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.72 3.89 2.76 3.9 - - - - - - - - - - 1.97 - - - - - 0.01 - - - - - - - - - - - - - - - - - - - - - - -
- 1.26 -3.31 0.31 -1.69 3.77 4.11 3.16 - - -2.11 -2.48 - - - - 0.41 - - - - - - - -1.72 0.66 - - - - - -1.22 - - - - - - - - - - - - - - - -5.75
- - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -2.06 - - 3.59 4.22 3.42 -2.22 -4.65 -4.45 -3.18 - - -2.42 - -3.12 -4.17 - - - -0.96 - - -2.64 -3.18 -3.86 -3.36 -2.17 -2.06 -0.29 -3.61 -1.02 -1.65 -3.3 -1.33 0.37 -3.59 - -3.69 - - -2.18 -3.87 - - -3.39 -3.1
0.54 0.71 -1.87 -2.09 -0.17 3.19 3.41 3.27 -2.36 -0.13 -3.26 - -0.72 -4.03 -3.61 2.3 - 0.93 -1.47 -2.16 -1.87 -1.31 - 0.39 -1.13 -4.3 -3.34 - - -3.28 -5.32 - -5.24 -2.45 - - - -1.98 - -3.44 - -3.96 -0.29 -2.64 -3.74 -3.32 -2.43 -
- - - - 0.42 4.27 1.65 2.76 - - - 4.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.55 - 2.77 - - - - 5.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.66 - - - 4.49 - - - - - - - - - - 1.67 - - - - - - 2.46 - - - - - - - - - - - - 2.79 - - 2.76 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.