Heatmap: Cluster_39 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- -3.33 -7.24 -6.38 -0.0 3.3 1.62 2.17 -3.42 0.28 -1.8 -2.06 -0.62 -5.34 0.48 - -2.28 -2.53 -6.5 -0.81 -1.98 -0.19 - -3.73 1.79 -2.87 0.28 0.57 0.28 -0.23 0.83 0.29 0.05 -0.15 1.1 1.33 0.7 -2.27 -2.3 -1.63 -2.47 -4.36 -2.25 -2.28 -1.9 -2.21 -0.4 0.24
- - -1.34 - - 3.5 2.27 3.33 - -0.4 -5.09 -1.61 -0.26 -1.02 0.94 0.89 - - - -1.21 -0.61 -0.94 - -0.51 0.26 - 0.54 -1.08 -4.32 -0.07 -1.28 -2.76 -2.25 -0.52 - -1.76 -0.77 -2.27 -1.76 -1.8 -0.28 -0.45 0.08 -0.44 - -1.14 0.58 -1.4
-3.54 -2.24 -2.97 -2.59 -1.28 2.6 1.7 2.14 -4.2 0.37 -1.03 -0.84 -0.52 -1.9 0.49 -3.35 -1.75 -2.86 -0.15 0.49 0.68 0.17 -4.47 -1.58 0.94 -3.31 0.22 0.06 -0.87 -0.03 0.78 -0.56 0.06 -0.38 -0.24 -0.15 0.29 -0.02 -1.52 -0.24 -0.11 -1.23 0.09 -0.19 -0.76 0.01 0.19 0.5
- - - - - - 3.17 5.29 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 3.0 - 2.6 - 4.89 - - - - - - - - - - - - - - - 2.1 - - - - - - - - - - - - - - - - - - - - - - - -
- -0.43 2.99 1.18 -2.13 2.0 1.14 3.51 -0.67 - - - - - - - 2.53 - - 2.13 - 0.31 - - -0.16 2.13 - - - -3.37 - - - - - - - -1.01 - - - - - -0.26 - -1.03 - -
- - - - - - - 4.07 - - - 2.42 - - - - - - - - - - - - 3.0 - - - - 0.16 - 2.58 - - - - - - - - 2.25 - - 1.46 - 1.72 - -
- - - - - 4.3 2.76 3.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.75 - - - - - -
- - - - 0.21 4.06 - 4.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.19 4.15 1.71 4.16 - - - - - - -4.4 1.63 - - - - - 1.46 - - - - - - - -4.92 - - - - 0.65 - - - - - - - -1.09 - - - - -
- - - - 0.19 4.15 1.71 4.16 - - - - - - -4.4 1.63 - - - - - 1.46 - - - - - - - -4.92 - - - - 0.65 - - - - - - - -1.09 - - - - -
- 1.95 - - 0.69 - 3.6 3.13 2.82 - - - - - - - - 1.83 - - - - - - - 3.46 - - - - - - - - - - - - - - - - - - - - - -
- - - 1.15 1.53 3.86 2.18 3.88 - -1.7 -0.64 - - - -1.01 - - - - - -0.3 1.22 - -0.38 0.31 -0.62 - - -1.05 - - - - - - -0.43 - -0.64 - - - - - - - - - -
- - - - 2.35 3.37 3.61 3.85 - - - - - - - - - - - - - - - - - - 2.56 - - - - - - - - - - - - - - - - - - - - -
- - - - 1.41 3.95 2.21 4.62 - -2.2 - - - - - - - - - - - - - - - - - - - -4.29 - - - -1.26 - - - - - - - - - - - - - -
- - - - - - - 4.74 - - - - - - - - - - - - - 4.41 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.7 0.96 - 0.39 1.19 3.58 3.85 - - - - - - - - 2.35 0.58 - - - - - - - 1.52 - - - -2.63 - - - - - - - - - - - - - - - - - -
-1.43 -1.45 0.01 -1.96 -0.41 2.62 1.47 2.44 -1.02 0.76 -1.48 -1.48 0.46 -1.66 0.26 -1.95 -1.47 -1.03 -0.63 0.66 0.19 0.44 -1.0 -2.05 1.65 -1.14 0.27 -0.23 -0.89 -0.6 -0.22 -0.34 -0.2 -0.62 -1.31 -0.22 0.16 -0.39 -1.63 -0.91 -1.17 -1.66 -0.54 -0.62 -1.09 -0.49 -0.76 -0.59
- - - - - - 4.48 4.68 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 3.27 4.94 - - - - - - - - - - - - - - - - - 2.94 - - - - - - - - - - - - - - - - - - - - - -
- - 1.28 - - 2.85 2.2 3.33 - - - - - - - - 3.55 - - - - - - - - 3.46 - - - - - - -0.0 - - - - - - - - - - - - - - -
-1.92 - -2.39 -1.7 -1.51 2.57 1.56 2.65 - - - - - - -2.91 - 0.97 0.58 2.73 0.43 1.3 2.38 -1.94 1.38 2.65 0.36 0.54 - - -1.97 - - - - - - - - - - - - - - - - -1.93 -3.85
- -2.22 -4.23 0.49 0.13 3.52 2.66 3.6 1.52 -0.48 -5.09 -4.55 -0.75 -1.76 -0.34 - 0.87 -1.58 -0.93 -0.61 -3.78 -0.37 -2.91 -4.64 -1.9 -3.11 0.02 - -1.07 -0.88 -0.75 - - - - - - -0.57 - -2.86 -1.03 -2.33 -3.95 - - -0.35 -2.7 -3.87
- - - - -0.15 3.33 3.65 4.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - -1.76 3.77 1.47 2.79 - -0.93 -0.71 -3.26 0.31 -2.36 0.57 - - -10.54 - -1.64 1.69 0.84 - -5.51 - - 0.44 - -1.66 -0.27 -1.69 - -1.63 -0.15 1.05 -0.55 -1.13 - -2.2 -0.37 -1.55 -1.96 0.72 0.18 -0.32 - -6.86 1.31
1.31 0.84 0.13 1.91 0.25 1.35 2.9 2.09 1.85 -0.34 - -2.5 - -1.92 -1.63 -2.95 -0.81 0.32 -2.12 -0.24 0.52 -1.72 -1.71 0.38 -0.75 1.09 -0.81 -0.7 -0.57 -0.04 0.44 -2.16 -1.16 -2.37 - -0.75 -0.97 -0.54 -1.48 - - -3.05 -1.88 -3.69 -3.17 0.04 - -1.53
- - - - - 1.57 - 3.61 - - - 0.1 -1.5 0.1 -0.62 - 0.28 -1.18 - 0.37 3.01 3.68 - - -0.89 -1.18 - - 0.23 -0.99 - - -0.88 - - -0.09 - - - - - -0.02 -1.19 - - - - -1.64
-3.92 -7.02 - -27.47 -1.72 4.16 3.11 3.37 -32.27 -3.54 - - -0.86 -1.09 -1.46 - - - -0.01 -1.2 -0.23 -29.31 1.36 -32.82 -5.09 - -1.7 -1.54 - 0.56 -3.91 - -5.94 -3.65 - -4.81 -2.91 -1.87 - -1.96 -4.52 -2.27 -4.02 -1.59 -2.42 -1.91 -2.2 -4.21
- 1.54 1.67 -0.78 1.52 3.92 3.2 3.29 - -3.55 - - - - -5.86 -0.73 0.33 0.52 - - - - - -2.37 -2.74 - - -1.67 -3.0 - - - - - - - - - - - - - -2.45 - - - - -
- - - - 0.43 - - 5.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.27 - - -
- - 3.2 - 1.81 2.55 - 3.25 - - - - - - - - 1.8 - - - - - - 2.37 - 2.81 - - - - - - - - 2.09 - - - - - - - - - - - - -
- - - - -0.38 1.99 0.86 3.7 - -1.52 - - - - - - - - - - - - - - -0.15 - - 1.06 - -0.35 - - -1.28 -0.58 -0.57 0.22 - 0.18 0.32 0.55 1.94 3.34 1.11 -0.64 - -0.38 - -
- - 0.44 - 1.56 1.79 2.96 4.63 - - - - - - - - 1.5 - 2.29 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.11 2.71 -1.57 - -3.05 0.37 3.43 2.23 2.09 - -0.4 1.08 -2.33 - -2.56 -1.38 1.34 -0.6 - - - - - 0.1 -1.4 3.26 - - - -0.51 - - - - - - - - - - - - - - - - - -0.9
- - - - - 4.73 - 4.43 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.97 4.33 2.2 4.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.11 1.45 3.22 -0.06 3.1 2.16 3.55 - - - - - - -1.28 - 0.93 - - - - 1.06 - - - - 0.1 - -0.13 - - - - - - - -0.03 - - - - - - -0.36 - - - -
- - - -1.34 2.28 3.43 0.62 3.93 - - - - - - -4.01 3.19 -1.18 -1.77 - - -0.85 -0.68 - - -1.57 -1.18 -0.02 - - - - - - - - - - - -0.52 - - - -0.77 - - 0.07 - -
1.77 0.14 -1.95 -0.44 -1.19 2.93 -1.0 2.73 - -2.11 -5.43 -0.1 -2.49 -0.0 -0.91 - - - 1.0 0.7 0.15 1.34 -1.14 -1.57 0.62 - 0.99 - 1.65 0.15 -1.74 - -2.71 -2.22 -0.04 -1.18 -1.9 0.12 - 0.3 - -0.91 - -1.55 0.18 -0.25 -0.82 -1.0
- 0.28 - -1.12 0.04 2.95 3.18 3.65 - -1.43 0.73 -0.02 - -0.76 -1.68 0.56 0.31 -0.79 - -1.02 -2.57 0.03 -1.36 -1.78 -0.7 -1.89 -3.18 -2.63 - -2.35 -1.63 -0.69 -1.99 -0.67 - - -2.63 -1.81 -0.96 - - - -0.87 -0.81 -0.82 -1.65 -2.71 -3.17
- - - - 1.47 - - 4.22 - 1.84 - 3.43 2.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.76 - - - - -
- - - - 1.47 - - 4.22 - 1.84 - 3.43 2.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.76 - - - - -
-1.64 -1.62 -0.39 -2.95 -1.14 1.74 1.24 0.98 0.01 -0.18 -2.2 -2.56 -0.77 -2.03 -0.79 -0.86 -0.21 0.25 1.9 1.46 1.37 1.4 -0.71 0.42 0.78 0.53 0.37 -0.64 -0.7 -0.39 -0.98 -0.26 -1.06 -0.57 -1.04 -0.7 -0.99 -0.06 -0.86 -0.91 -0.44 -0.68 -0.65 -0.35 -0.49 -0.26 -0.57 -0.41
- 1.77 -0.23 - - 1.11 0.7 3.5 - -0.71 1.36 0.2 - - -2.07 - - - - 1.5 - - - 0.48 2.01 0.37 - - 1.78 -0.75 0.84 - - 0.31 - - - 0.89 - 1.59 - - - - - 0.33 - 0.4
- - - - - 4.28 - 3.66 - - 3.26 1.04 - - - - - - - - - - - - - - 1.37 - 0.78 - - - - - - - - - - - - - - - - - - -
- - - - - 3.94 - 4.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.5 - - - - - - - - - -
- -0.02 0.19 1.87 2.21 3.65 3.21 3.81 - - - - -1.61 - - - - - - - - - - - - - - - - - - - - - - - -1.24 -0.75 - - - - - - - -1.29 - -
- - 2.98 2.54 0.17 1.78 3.34 0.86 - - - - - - - 1.15 1.24 0.73 1.1 0.27 -0.71 -0.64 - 2.19 - - - -0.61 - -4.24 -1.63 - - - - - - - - -0.64 - - -0.65 - - - - -
- - - - - 3.54 1.45 2.66 - - - - - - - - - - - - - - - - 3.05 - 1.37 - - - - 1.17 - - - - - - - - - 2.45 - - - 2.46 1.69 -
0.46 -0.73 -3.98 -1.61 0.61 3.25 2.47 2.91 -1.06 -4.04 - - -2.6 - -5.17 -2.86 -2.49 -1.04 -0.3 -2.54 -4.37 -2.96 -4.78 -2.23 1.99 0.61 1.65 -3.0 - -3.82 - -4.91 -4.3 -4.86 - -4.72 - - - - - - - -1.25 -3.47 -5.34 3.17 -7.13
- - - - - 4.4 - 3.86 - - - - - - - - - - - - - 2.04 - - - - 2.08 - 1.86 -1.35 - - - - - - - - - - - - - - - - - -
- - - - -0.82 3.71 2.41 4.56 - - - - - - - - - - - - - - - 1.27 0.44 - - - - - - - - - 0.44 - - - - - - - - - - - - -1.48
-3.44 - -1.42 -0.61 1.68 3.74 2.94 3.67 0.04 -1.48 - - -0.77 -0.4 -0.16 -1.76 -1.81 -4.35 -4.68 -2.71 -4.6 -1.71 - -5.82 -6.32 -1.64 -1.99 -2.05 -4.65 -3.27 -1.48 - -4.77 -4.85 -3.99 - -2.49 -2.46 -4.99 -2.39 0.06 -1.88 -2.19 -1.47 -5.37 -3.19 -4.16 -0.11
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.91 -0.49 -2.52 -2.45 1.08 2.93 1.36 1.85 -0.22 -0.1 0.28 0.17 -0.93 -1.45 -0.39 -0.87 0.44 -0.33 -2.04 -1.41 -1.13 -0.84 -2.86 -2.47 0.13 0.83 0.63 -0.91 -0.92 -0.61 0.58 -0.75 -0.47 -1.01 -2.25 -0.34 0.08 -0.27 -1.74 -0.78 0.67 0.25 -0.41 -0.56 -1.65 -0.09 -0.49 -0.09
- - -0.15 - 2.52 3.33 2.87 3.74 1.92 - - -0.71 - - -3.48 - -1.55 - - - - - 0.99 0.4 -0.61 0.2 -1.38 - - -3.81 -2.04 - - - - - - - - - - - - - - - - -
- - 2.4 - -0.47 3.44 3.09 3.53 - - - - - - - - 2.46 - - 1.93 - - - - - 0.83 - - - - - - - - - - - - - - - - - - - - - -
1.43 -0.8 -1.31 -3.66 -2.64 3.81 2.99 4.0 - - -2.3 -1.48 -3.24 -2.99 -4.22 - -0.1 -1.92 - -2.0 - - -2.83 -1.02 -4.75 -1.13 -4.19 -4.1 -4.42 -1.45 -5.11 -1.3 -5.06 -2.6 - -4.17 - -3.27 -2.7 -4.47 -3.87 -2.56 -2.94 -3.43 -4.61 -3.12 -2.02 -1.76
- - - - - 4.21 - 3.18 - - - - - - -2.51 - - - - - - - - - 1.34 - 1.89 1.99 2.3 -1.84 - - - - - - - - - - - 1.88 - - - - - 0.12
- - - - 0.48 2.45 1.72 5.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.35 3.2 2.66 2.9 - - 1.44 2.28 - - - - - - - - - - 2.47 - 2.38 2.45 - - - - - - - - - - - - - - - - - - - - - -
- - - - - 1.76 4.09 3.47 0.9 - - - - - -2.97 - 1.11 - - - - - - - 1.95 - 2.77 - - 0.72 - - - - - - - - - - - - - - - - - -
- 2.64 - -0.59 -1.01 2.76 3.88 3.7 - - - - - - -2.52 - 0.79 - - - - - - - - - - - - - - - - - - - - 0.78 - - - - - - - 0.79 - -0.6
- - -0.12 1.13 0.96 2.33 3.83 3.25 - -1.07 - - - - - - - - - - - - - - -0.39 1.2 3.42 - - - - - - - - - - - - - - - - - - - - -
- -7.44 - - 1.72 4.39 2.75 4.08 - - - - -4.65 - -7.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 0.21 1.37 2.69 1.66 2.53 3.02 1.7 -0.7 - 1.3 -1.22 -1.38 - - 0.65 -0.96 - - 0.5 1.24 -0.94 -0.03 - 1.02 - 1.39 - - -3.82 -1.54 -1.24 -1.61 - - -1.08 - - - - - - - - - - - -
- 2.11 - - - 4.19 - 3.71 - - - - - - - - 3.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 1.6 - - - 4.21 - - - - - - - - 3.38 - - - - 1.88 - - - 3.35 - - - - - - - - - - - - - - - - - - - - - 1.09
-2.26 0.45 1.99 0.26 -1.7 3.13 2.77 3.35 -5.02 -3.85 -2.34 -1.42 -4.11 -3.56 -2.87 1.12 -0.24 0.47 -3.13 0.67 0.56 0.5 -0.86 0.21 -0.77 -1.3 - -3.99 -3.97 -2.65 -4.44 -3.44 -4.64 -4.22 -4.32 -5.4 -4.69 -3.8 -4.71 -3.3 -0.49 -1.11 -2.68 -2.85 -5.29 -3.4 -5.19 -3.43
- - - - - 3.45 - 4.15 - - - - - 2.98 - - - - - - - 3.21 - - - - - - - 1.1 - - - - - - - - - - - - - - - - - -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 4.25 3.21 -24.03 3.7 - -1.64 -2.02 - - - -2.66 - -0.97 -2.9 - - -1.58 -0.97 - - 2.03 - - -4.23 - -3.77 - - -4.11 - - - - - - -3.12 - - - - -3.26 - - -3.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.