Heatmap: Cluster_40 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - - 2.18 - - - 4.96 - - - - - - - 2.58 - - - - - - - - 2.58 - - - -1.19 - - - - - - - - - - - - - - - - - -
0.82 0.94 2.19 0.52 -4.51 - - - 3.7 - - - - - -6.53 3.83 2.28 0.16 - - - - - -2.12 -3.25 2.22 - - - -5.61 - - - - - - - - - - - - - - - - - -
- - 1.35 2.05 -4.52 - - - 5.29 - - - - - - - 0.61 -2.4 - - - - - - - -1.36 - - - - - - - - - - - - - - - - - - - - - -
- - -0.7 - -3.7 - - - 5.38 - - - - - - -0.42 0.71 -1.72 - - - - - - - 1.48 - - - -3.48 - - - - - - - - - - - - - - - - - -
- - 0.79 - - - 1.72 - 5.18 - - - - - -2.84 - - - - - - - - - - 2.7 - - - - - - - - - - - - - - - - - - - - - -
- 2.06 1.29 1.72 0.91 - - - 3.09 - - - - - - 4.57 1.98 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.1 2.17 0.88 - -3.08 - -0.88 -1.73 3.24 -0.01 -1.95 - -2.41 - -3.62 - 2.57 -2.68 - 0.24 - -1.97 - -1.52 - 2.28 -0.28 - - -0.66 0.86 -1.12 - - - - - 2.53 - - -0.59 -0.15 1.71 - - 1.19 - -2.72
- 3.19 - - - - - - 5.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.3 1.37 0.27 3.65 1.19 1.55 1.81 1.63 3.84 -10.62 -11.17 -8.7 -9.2 -10.79 -5.83 0.57 -2.46 -0.78 -7.78 -7.27 - -8.32 -4.85 -2.37 -7.72 -1.35 -9.71 -7.37 -10.3 -4.25 -10.05 -11.47 -11.35 -9.58 - - -9.16 -5.3 - - - - - -9.65 -11.68 -5.29 - -6.65
- 1.44 1.89 - - - - - 3.7 - - - -0.29 - - - 3.81 1.62 - - - - - - - 3.42 - - - - - - - - - - - - - - - - - - - - - -
- - 2.54 - - -2.59 - -1.88 4.46 -4.51 -3.34 -2.5 - -2.2 -4.42 2.98 1.02 -0.53 - - - - - 1.42 -1.72 1.11 -1.3 -1.95 -0.42 -2.66 -2.1 - - - - - - -3.35 - -2.47 -2.84 -1.42 -3.35 -2.72 - -1.58 - -2.63
- -0.83 -0.77 -3.91 -1.23 -0.3 -0.32 -0.82 2.9 1.6 -2.11 -1.79 -0.34 -1.3 0.55 -0.79 -0.05 -0.66 - -1.19 -1.49 -1.84 - 0.15 -0.88 1.26 -1.57 -0.68 -1.69 -1.29 -1.29 -1.12 -1.6 -1.74 -3.57 -2.3 -2.98 1.06 -0.79 1.77 0.75 0.97 0.08 0.78 0.08 0.75 2.03 -1.65
- - - - - - 3.0 - 3.87 - - - - - - 2.71 3.58 1.56 - - - - - - - - - - - - - - - - - - - 1.63 - - - - - - - -0.2 - -
0.87 1.5 0.59 -0.58 -0.44 -2.36 -4.61 -3.49 3.84 -2.28 -1.01 -3.17 - - -1.15 2.72 2.2 -0.94 -0.11 0.28 -1.82 -0.0 - -1.62 -1.47 2.14 -1.55 -2.91 -1.8 -1.59 -2.52 -1.92 -2.23 -1.51 -1.27 -2.37 -2.25 - - -2.63 -3.44 -2.63 -2.31 -3.21 - -2.03 -1.9 -2.38
- - - - - - - - 3.59 - - - - - - 4.67 2.38 - - - - - - - - 2.39 - - - - - - - - - - - - - - - - - - - - - -
2.5 0.65 -4.14 2.85 -8.23 -7.55 - -6.85 4.29 -8.77 -8.22 - - - -3.06 1.57 2.19 0.62 - -6.71 - - -3.15 1.41 -8.65 0.87 -5.85 -8.03 -7.72 -5.58 - - - - -8.52 - -8.26 - - - - - -8.31 - -8.55 - - -
2.5 0.65 -4.14 2.85 -8.23 -7.55 - -6.85 4.29 -8.77 -8.22 - - - -3.06 1.57 2.19 0.62 - -6.71 - - -3.15 1.41 -8.65 0.87 -5.85 -8.03 -7.72 -5.58 - - - - -8.52 - -8.26 - - - - - -8.31 - -8.55 - - -
2.5 0.65 -4.14 2.85 -8.23 -7.55 - -6.85 4.29 -8.77 -8.22 - - - -3.06 1.57 2.19 0.62 - -6.71 - - -3.15 1.41 -8.65 0.87 -5.85 -8.03 -7.72 -5.58 - - - - -8.52 - -8.26 - - - - - -8.31 - -8.55 - - -
-2.37 -3.13 0.34 -2.79 -4.14 - - - 4.66 - - - - - -4.74 4.01 1.58 -1.96 - - - - - - - 0.61 - - - -5.61 - - - - - - - - - - - - - - - - - -
2.11 - 1.1 1.68 0.67 - - - 3.38 - - - - - -4.67 1.67 2.53 1.57 - - - - - 2.26 - 2.56 - - -0.8 - - - -2.26 0.7 - -0.19 - - - - - - - - - - - -1.31
- 3.78 -0.83 0.64 - - - - 4.46 - - - - - -6.84 2.71 1.44 -1.54 - - - - - -3.61 - -1.61 - - - - - - - - - - - - - - - -3.51 - - - - - -
- -0.39 -1.92 -3.82 -0.19 -0.79 2.24 1.16 4.01 -0.62 0.2 0.55 0.19 -0.06 -0.26 - 0.36 -0.19 -0.09 0.5 0.45 1.06 -0.54 - -2.72 -0.88 -1.98 - -1.53 -1.04 -2.07 -2.15 -2.85 -3.32 -3.84 - -1.78 -1.18 -1.72 -1.07 -1.37 -1.33 -1.73 -1.46 -0.58 -0.41 -2.47 -1.34
- - - - - - - - 5.43 - - - - - - 2.02 -0.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.16 1.88 0.53 3.56 0.07 0.54 -0.2 0.14 2.6 -3.69 0.05 0.74 -5.79 -2.76 -3.81 1.76 0.51 1.26 -0.6 -2.59 -2.04 -1.39 -3.93 -3.05 -1.37 0.12 0.8 -1.48 -0.61 -2.45 -4.13 -3.26 -3.22 -2.46 -0.65 -3.9 -2.81 -5.28 -3.66 - - - -3.08 -3.47 -3.55 -4.5 -2.95 -2.86
- - 0.24 4.14 0.07 0.75 -0.02 0.23 4.51 - - - - - - - -0.76 -1.08 - - - - - - - -0.91 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -1.81 - -0.68 - - - 5.43 - - - - - -4.29 - -1.28 - - - - - - - - 1.76 - - - - - - - - - - - - - - - - - - - - - -
- 1.75 -2.83 -1.69 -3.21 - - - 5.29 - -2.24 -0.95 - - - -0.52 0.54 - - - - - - - - -0.23 - - - -5.47 - -2.27 - - - - - -1.7 - -2.34 - -2.07 - - - -2.26 - -
-1.24 0.35 0.91 0.82 -1.41 - - 0.04 3.6 - - - - - - 4.47 2.22 -1.27 - - - - - - - 0.91 - - - -4.5 - - - - - - - - - - - - - - - - - -
- 1.98 - -1.59 - - - - 5.34 - - - - - -5.44 - -0.97 - - - - - - - - 1.43 - - - - - - - - - - - - - - - - - - - - - -
- 1.88 - -2.6 - 0.54 0.87 0.04 4.28 -1.81 - - -2.76 - -3.48 - 2.37 0.56 2.78 -0.24 -2.0 - -1.41 -2.32 0.04 -1.43 -1.48 -0.42 -2.86 -4.7 - - - -2.67 - -2.24 - 0.17 - - - -2.12 -2.45 - - - - -2.91
- - 1.16 1.65 -2.07 -1.08 0.19 - 4.71 - - - - - - 3.49 0.75 -1.01 - - - - - - - 0.27 - - - - - - - - - - - - - - - - - - - - - -
- - 1.93 - - - - - 4.14 - -1.61 -0.92 - -2.52 -5.01 - 1.91 1.66 -0.4 -2.09 - -0.8 - 3.71 -0.11 0.52 -1.4 - - -3.86 - -1.19 - - - - - -2.47 - - - - - - -2.56 -1.65 - -3.31
- - 3.06 -1.75 -2.41 - - - 4.88 - - - - - - - 1.72 -2.0 - - - - - - - 2.61 - - - - - - - - - - - - - - - - - - - - - -
- 0.87 1.72 -4.5 0.74 2.16 1.29 1.14 3.36 -1.98 -3.02 -3.4 - -3.93 -3.91 -2.35 1.62 0.49 0.19 1.19 -0.86 0.09 -1.53 -3.95 -0.99 -1.23 -1.23 0.19 -1.19 -0.54 -2.8 -1.11 -1.14 0.08 - -2.27 -2.02 -2.17 -1.32 -1.84 -3.56 -3.9 -0.35 -0.4 -1.4 -1.65 -0.83 0.07
- 2.46 -0.65 -0.82 -0.4 -2.75 -0.78 -4.88 2.98 -2.87 - - -0.79 1.29 -3.29 1.14 0.1 -2.53 -3.99 -0.2 - -1.53 -2.7 - 2.78 1.27 0.49 -0.89 -0.2 -1.45 -2.32 -1.08 -1.47 0.22 -1.1 -0.65 -0.87 -2.07 -2.19 -2.09 -1.66 -2.58 -2.18 1.17 -3.31 -1.04 -0.6 1.35
1.16 -0.13 -0.91 0.35 -0.81 0.58 0.9 0.72 2.0 0.11 -1.44 -0.84 -0.82 -1.91 0.31 1.83 -0.02 -0.01 0.06 0.52 0.5 1.42 -4.37 -1.52 -0.17 1.82 -0.63 0.17 0.34 -0.19 -0.7 -1.6 -1.34 -0.33 -0.87 -2.34 -0.88 -0.61 -1.95 -1.4 -2.34 -1.61 -0.85 -1.19 -1.8 -0.65 -0.71 -0.36
- - 1.64 -0.37 -0.45 - - -3.31 3.21 -2.76 -3.72 -3.46 -0.2 -1.36 -1.86 3.12 2.04 0.36 0.32 2.56 -0.24 -1.49 0.4 0.88 -2.87 2.17 -2.54 -2.36 -3.11 -2.63 - -3.17 -6.56 -2.78 - -4.71 - -3.43 - -2.36 -3.25 -2.83 -4.3 -3.49 -3.77 -3.46 -4.5 -3.49
- - - 2.1 - - - - 5.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.06 -0.54 -1.22 -1.53 0.31 2.38 - 3.96 -2.83 -1.4 -2.22 -1.74 - -3.88 2.65 -0.18 1.09 - -2.39 - -3.02 - 0.17 0.73 0.65 1.78 - 0.51 -4.26 -4.27 - -4.42 - -3.75 -2.96 - -0.81 - - - - - -2.91 -1.87 0.19 - -5.23
1.25 1.76 -2.52 2.36 -4.37 - - - 4.49 - -4.98 - - - -5.7 -3.15 1.49 0.7 0.87 -2.29 2.21 -1.12 -0.99 0.37 - -0.13 - - - -4.77 - - - - - - - - - - - - - - - - - -
- - -1.08 1.38 -2.04 - - - 3.23 - - -2.96 - - -4.46 4.79 1.89 -2.89 - - - - - - - 1.62 -1.82 - - -6.16 - -2.73 - - - - - - - - - - - - - - - -5.01
3.26 0.62 - - -2.81 0.72 -1.56 -0.32 4.08 -2.25 -0.71 -0.25 - -0.51 -2.8 1.76 -0.19 -1.18 - -2.22 - - - -1.52 -3.16 - - - -2.19 -0.74 -3.26 - -0.77 -1.61 -0.6 - - -0.49 -2.11 0.87 -1.72 -1.53 -1.55 -0.13 -1.84 -0.25 -1.58 -0.94
2.37 2.04 -2.31 3.27 -0.73 1.41 0.1 0.3 3.68 - -1.59 -1.88 - - -4.79 1.29 -0.13 0.24 - - - -1.21 - 0.81 -1.51 1.4 - - - -4.48 - - - - - - - - - - - - - - - - - -3.29
- 3.94 0.97 -3.79 0.09 0.36 0.41 1.06 2.88 0.34 - -2.62 0.8 -1.57 -0.62 -2.74 0.64 -0.07 - -1.31 -0.02 - - -1.51 -3.84 2.54 - - - -2.55 -0.42 - - - - - - -2.36 - -2.22 -2.4 -3.11 -3.46 - - -1.47 -0.37 -3.27
0.17 3.33 - 0.96 - - - - 4.61 - - - - - -4.92 1.36 0.06 - - - - - - -0.69 - 2.62 - - - - - - - - - - - - - - - - - - - - - -
0.26 3.44 3.07 2.64 - - - - 2.99 -5.94 - - - - -2.9 1.61 -0.79 2.77 - - - - -1.53 0.5 -3.78 -2.03 - -4.18 - -2.14 - -4.44 -5.04 -4.55 - - - - - - - - - - - - -3.44 -2.33
- 3.81 -2.1 - 0.94 2.31 1.53 1.72 3.03 - - - 1.38 - -1.29 - -0.25 -1.09 - - - -0.38 - - 1.25 0.81 - - - -3.6 - - - -1.16 - -0.94 - -0.51 - - - - - - - -1.51 -0.31 -1.53
-0.97 3.17 0.22 -0.24 - - - - 4.08 - - - - - -6.94 3.99 0.88 -3.26 - - - - - - - 0.8 - - - - - - - - - - - - - - - - - - - - - -
- - -2.73 1.86 -2.24 - - - 5.26 - - - - - - -0.49 -0.03 -2.2 - - - - - - - 1.95 - - - - - - - - - - - - - - - - - - - - - -
0.14 1.43 1.92 1.13 -1.61 -2.45 - -0.75 3.26 -3.11 - - - - -1.87 3.06 1.32 0.59 -0.95 -0.65 - - - 3.11 0.34 0.51 0.36 - - -5.06 - -3.23 -5.08 -3.26 - - -2.94 -1.91 - - - -1.96 - - - -2.73 - -
1.76 1.44 -0.24 -0.18 -3.3 -0.59 -1.64 -1.06 3.31 -1.98 0.5 0.64 -2.02 -1.74 -2.04 1.4 1.33 0.82 -0.27 -1.63 -1.83 -2.07 -0.36 -0.58 0.09 2.43 -0.96 -0.96 -0.26 -1.45 -1.63 -0.47 -2.16 -1.46 -0.14 -0.38 -1.71 -1.84 -3.17 -3.34 -3.47 -2.5 -2.92 -2.18 -2.38 -1.81 -2.36 -0.83
1.73 - - - 0.47 0.1 - 0.39 4.58 2.25 - - 1.38 -1.19 1.87 - -1.59 - - - - - - - -2.14 - -1.03 - -0.34 - - - - - - -2.08 - -0.81 - -0.06 - - - - -1.19 -1.28 -0.26 -2.18
1.41 1.92 1.99 -1.44 -2.82 0.37 -14.17 1.55 3.29 -5.89 - - - - -5.69 1.24 0.24 1.33 -0.09 -2.83 0.21 - 3.32 -0.69 -3.32 1.21 -2.52 - -3.38 -2.83 -4.06 -5.05 -5.99 -5.4 -0.33 - - -3.98 -4.32 - -2.69 -4.59 - -4.33 - - - -3.84
3.71 2.29 0.04 0.91 - - - - 4.55 - - - - - -6.98 - 0.88 -1.72 - - - - - -3.4 - 0.5 - - - - - - - - - - - - - - - - - - - - - -
- -0.32 0.17 0.81 1.1 - - - 4.67 - - - - - -2.9 - 2.9 - - - - - - 0.92 - 2.85 - - - -3.57 - - - - - - - - - - - - - - - - - -
- - - - - - - - 5.33 - - - - - - - 1.86 - - - - - - - - 2.01 - - - - - - - - - - - - - - - - - - - - - -
-1.58 - -0.76 - -0.82 -0.0 - 1.41 3.98 1.6 -1.63 - 2.57 -0.03 -1.62 -1.04 - 0.39 0.5 - - - - -0.33 -1.55 - - - - 0.74 - - - - - - - 0.34 - 1.33 0.05 0.06 0.98 -0.82 - 0.77 -1.56 -
- 2.47 1.96 -0.94 - - - - 5.05 - - - - - -6.75 - 1.17 - - - - - - -2.49 - 1.34 - - - - - - - - - - - - - - - - - - - - - -
1.03 1.48 -0.11 0.83 -1.93 1.42 -0.44 0.86 3.42 -2.29 1.03 0.71 -1.69 -1.33 -1.27 1.64 -1.31 -0.61 -4.26 -2.67 -3.16 -1.77 -5.69 2.13 -0.29 2.64 -0.4 -6.44 -2.23 -3.3 -2.92 0.05 -4.63 -8.42 -2.36 -11.4 -7.2 -4.39 -9.78 -5.85 -7.42 -7.65 -4.59 -8.53 -3.4 -4.67 -8.36 -1.98
1.78 1.62 -2.05 -0.34 -2.51 -0.06 -1.7 -0.46 2.99 -0.53 -0.44 -0.57 0.72 0.52 -0.11 2.21 0.39 0.62 -2.17 -1.8 -1.92 0.23 -2.76 -2.3 -0.27 3.36 -0.52 -8.12 -1.16 -4.19 -3.31 -0.82 -5.39 -10.25 -0.56 -9.57 -8.35 -3.28 -7.63 -6.18 -9.12 -8.95 -4.37 -6.95 -3.94 -3.22 -7.92 -1.13
1.32 2.93 2.03 1.57 -2.34 - - - 2.62 - - - - - - 3.82 2.18 -0.9 - - - - - 0.95 - 1.73 - - - -6.55 - - - - - - - - - - - - - - - - - -
- - 0.76 - 0.73 -2.92 2.48 - 4.31 - - - - - - 1.52 2.08 -0.21 - - - -3.75 - 1.16 - 2.81 - - - - -1.03 - - - - - - -1.73 - - - 0.04 - - - - - -
2.89 0.64 0.68 - -2.75 - -2.86 1.36 4.65 -2.05 - - -1.85 - -1.36 0.09 -0.53 0.18 -2.42 -2.04 -3.55 -3.4 -0.64 -2.01 -3.06 1.41 - -3.83 - -2.19 - -4.13 -4.71 -4.05 - - -3.72 -2.79 -3.49 -2.8 - - -2.49 - -4.32 -2.33 - -4.84
- 0.76 0.22 1.51 - - - - 5.03 -2.19 - - -0.61 - -5.57 1.79 2.14 -2.09 - - - - - - - -1.19 - - - - - - -3.38 - - - - - - - - - - - - - - -3.13
- -0.2 0.81 0.59 -1.45 -0.3 - - 4.5 - - - - - -5.13 3.89 1.88 - - - - - - - - 0.63 - - - -4.82 - - - - - - - - - - - - - - - - - -
- 1.07 - 0.06 -3.4 - - - 4.74 - - - - - -3.59 3.34 1.07 -0.82 - - - - - -0.25 - 2.11 - - - -3.89 - - - - - - - - - - - - - - - - - -
0.67 3.0 0.76 1.74 -5.22 -3.06 -12.49 - 3.72 -6.45 -5.82 -6.79 - -7.28 -5.08 1.73 0.64 2.84 -2.13 -3.97 -0.21 -2.22 -2.91 0.4 -10.03 2.19 -3.45 -5.31 -5.13 -2.81 -6.69 - -5.95 -6.65 -6.63 -6.69 - -4.53 -7.35 - - - - -5.94 -7.7 -6.26 -6.01 -4.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.