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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.46 | -1.74 | - | -2.96 | - | - | - | 0.57 | 1.09 | -0.41 | 0.46 | 0.74 | 1.8 | 0.12 | 0.07 | - | - | - | -0.7 | 0.97 | - | -2.16 | 2.19 | - | - | -0.9 | - | - | -0.34 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.58 | 0.6 | 3.48 | 1.49 | - | 0.68 | 1.02 | -0.98 | 0.67 | 1.25 | 0.33 | -0.69 | 0.33 | 1.46 | |
| - | - | - | - | - | - | - | -2.26 | 1.71 | -1.51 | 0.63 | -0.5 | 2.32 | 1.27 | 0.83 | - | - | - | -0.55 | - | - | -0.7 | - | -1.37 | -1.42 | -1.75 | 0.32 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.12 | -0.48 | 3.75 | - | -0.17 | 1.49 | 1.25 | 1.0 | 1.61 | 1.5 | 0.82 | 0.71 | 0.82 | 0.71 | |
| 1.45 | - | - | - | 0.03 | - | - | - | 2.6 | -1.04 | 0.76 | - | -0.27 | -0.94 | -1.7 | - | - | - | 0.61 | - | - | -1.47 | - | - | - | -1.1 | - | - | - | - | -0.35 | - | -0.47 | - | - | -0.03 | - | -0.72 | 0.69 | 1.2 | -0.33 | - | -1.21 | -1.49 | 4.06 | - | - | 2.5 | 1.75 | - | 0.05 | - | -1.63 | -0.71 | -0.37 | 1.58 | |
| 1.23 | -3.15 | -4.93 | -5.42 | -4.43 | - | - | -4.9 | 1.92 | 0.61 | 0.85 | -0.06 | 1.7 | 1.42 | -0.45 | -2.94 | - | - | 1.31 | -2.11 | -2.14 | -3.41 | -2.36 | -0.36 | -0.66 | -0.06 | -0.37 | -2.26 | -2.87 | -2.29 | 0.1 | -1.11 | -0.53 | -1.6 | -2.41 | -0.45 | -1.8 | -1.04 | -0.25 | -0.55 | -0.09 | -2.38 | 1.56 | 0.79 | 2.93 | -1.7 | -1.86 | 1.61 | 1.4 | -1.36 | -0.74 | -0.91 | -1.64 | -2.47 | -0.62 | 1.81 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.