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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | 0.53 | - | 3.01 | - | 0.65 | 2.87 | 3.08 | 1.84 | - | - | - | 2.57 | - | - | -0.39 | - | - | - | -0.71 | - | 2.1 | - | - | -1.62 | - | - | -3.47 | 1.24 | 1.65 | - | -0.62 | - | -0.88 | - | - | - | - | 0.01 | - | - | -2.85 | -0.39 | 0.28 | - | - | - | -0.52 | - | 1.58 | |
| - | - | 0.05 | -1.43 | 1.43 | -3.34 | -1.56 | 0.66 | - | 2.09 | - | -0.04 | 1.11 | 2.52 | 0.98 | -1.86 | 3.41 | 1.84 | 2.06 | -2.6 | -1.55 | 0.86 | - | 1.5 | 0.87 | -0.01 | - | -1.66 | - | - | - | - | - | - | - | -2.7 | -2.27 | -2.91 | - | -2.28 | -2.21 | - | - | - | - | -0.41 | 1.54 | -1.1 | 0.71 | - | -2.1 | -2.58 | -1.57 | - | -1.4 | - | |
| - | - | - | -0.6 | - | - | - | -0.7 | - | 2.26 | - | 0.13 | 1.86 | 3.53 | 1.16 | - | - | - | 3.08 | 1.72 | - | 1.08 | - | - | - | 0.14 | - | - | -0.28 | - | - | - | -0.07 | - | -0.83 | -1.19 | - | - | - | 0.82 | - | -0.74 | - | - | - | -1.11 | - | -0.52 | -1.27 | 0.26 | 1.01 | -1.01 | -0.35 | 0.15 | 2.05 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.