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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.42 | 0.06 | - | - | - | - | - | 0.03 | 1.27 | 2.18 | - | -0.12 | - | -0.47 | -0.95 | - | - | - | 2.7 | - | -1.32 | -2.34 | - | - | - | -1.88 | - | - | - | - | -0.25 | -2.35 | -0.73 | -1.16 | - | -0.69 | -0.32 | -1.1 | -1.59 | -0.45 | - | - | 2.68 | 0.87 | 1.57 | - | - | 1.32 | 1.46 | -0.09 | 1.83 | -0.05 | -1.49 | -1.95 | 1.89 | 2.44 | |
| -0.28 | -0.45 | -4.63 | -3.0 | -4.38 | - | - | -0.05 | -1.25 | 1.58 | 0.33 | 0.56 | 0.29 | -1.67 | 0.46 | - | - | - | 0.62 | -0.27 | -0.64 | -0.64 | -1.83 | -0.12 | -0.06 | -0.01 | -3.06 | -0.95 | 0.15 | -0.27 | -1.16 | -0.58 | -1.02 | 0.09 | -0.79 | -0.85 | -0.45 | -0.93 | -0.53 | -1.35 | -0.5 | -1.21 | 1.5 | 0.27 | 1.25 | -0.17 | -1.56 | 0.5 | 0.38 | 1.26 | 1.37 | 1.17 | 0.69 | 1.19 | 2.15 | 0.7 | |
| 0.93 | -1.76 | - | - | - | - | - | 0.45 | 0.34 | 2.18 | - | -1.36 | -1.32 | - | 0.21 | - | - | - | 2.63 | - | 1.25 | - | - | - | - | -2.91 | - | - | - | - | -0.07 | -0.61 | -0.57 | -2.25 | -1.62 | -0.94 | -0.08 | -2.82 | -0.13 | 0.37 | -0.51 | -2.53 | 2.3 | -1.47 | 0.84 | -1.52 | -1.47 | 0.99 | 1.08 | 0.54 | 2.44 | 1.09 | -0.61 | -1.08 | 2.4 | 0.25 | |
| - | - | - | - | - | - | - | -2.25 | 0.68 | 1.03 | - | -0.07 | -0.52 | -0.39 | 0.99 | - | - | - | 2.54 | - | - | - | - | - | - | -2.0 | - | - | - | - | -2.38 | -0.75 | -1.25 | -0.66 | -1.47 | -0.45 | -2.48 | -0.57 | -0.4 | 0.54 | - | -1.21 | 2.63 | 0.54 | 0.95 | - | - | 0.66 | 0.75 | -0.16 | 2.89 | 2.22 | -0.36 | -0.93 | 2.84 | 0.07 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.