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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.7 | 1.36 | - | - | - | - | - | - | -5.07 | - | - | - | -2.45 | - | -2.87 | - | - | - | - | 0.66 | - | 3.84 | - | - | 1.92 | 0.53 | -0.03 | 0.6 | -1.86 | -0.18 | -1.03 | - | -2.69 | -2.49 | -2.84 | -0.46 | -1.34 | - | -2.42 | -2.34 | - | - | - | - | -2.69 | -1.68 | 3.28 | 1.44 | 0.97 | - | - | - | - | - | - | 3.37 | |
| - | - | - | - | - | - | - | -2.08 | -1.3 | - | - | - | - | - | - | - | - | - | - | - | - | 3.57 | - | - | - | 1.84 | - | - | - | - | - | - | - | - | -1.87 | - | - | -2.43 | - | - | -2.19 | - | 1.07 | 0.17 | 3.35 | -1.94 | 3.6 | 0.76 | 1.7 | -2.15 | - | - | - | - | - | 3.05 | |
| -1.18 | 0.29 | - | - | - | - | - | - | - | 0.27 | - | - | -1.86 | - | -0.74 | - | - | - | -0.4 | - | - | 3.47 | - | - | - | 2.03 | - | - | - | - | - | - | - | - | - | - | - | -2.45 | - | -0.81 | - | -1.2 | - | - | - | -0.51 | 3.7 | -2.62 | -3.21 | -0.85 | - | - | - | - | 0.25 | 4.28 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.