Heatmap: Cluster_198 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G05260 (RCI3)
-5.61 -4.09 -11.01 -8.69 -11.77 - - -9.22 -8.91 -6.85 -7.03 1.03 -2.18 1.29 -6.9 -8.09 -9.84 -8.76 -2.14 -5.93 -6.18 -4.53 -8.62 0.28 -9.01 -1.13 -6.16 -3.82 1.18 -9.44 -1.78 -0.98 -1.7 1.25 -6.22 -2.16 -8.73 -3.16 -12.22 -8.54 - 3.3 4.16 -2.23 2.16 - - 1.41
0.98 -3.36 - 0.99 - - - - - - - 2.04 - - - - - - - - - - - 0.77 - 1.37 - 2.44 4.44 - - - - -2.07 - - - - - - - 2.58 - - 1.09 - - -
AT1G18835 (MIF3)
- -7.28 0.61 1.36 2.11 0.89 0.94 - - - - - - -1.04 -1.43 -2.08 - - -2.43 -6.79 - - -3.52 -7.02 -2.84 - 1.36 - - - -3.67 -0.83 -0.7 2.71 1.25 2.31 1.13 1.09 -3.18 - - 2.99 0.04 -1.83 1.17 - - -0.51
- -1.62 - - - - - - - - - - - -3.73 -0.96 - - - - -1.62 - 1.87 2.1 -7.54 - - - - -0.13 - - 2.83 0.07 2.27 -1.19 3.19 - 1.28 -4.86 - - 3.06 1.22 -1.36 0.87 - - -
0.18 -0.96 1.11 -1.16 1.81 1.64 -0.15 -5.79 -3.71 -6.95 -7.52 - -7.54 -1.22 - -0.86 0.62 -3.63 -1.02 0.56 -3.19 -1.33 -3.06 -1.33 -1.65 -0.13 1.16 2.31 0.6 -2.69 -2.21 1.3 -0.87 -1.38 -1.03 -1.78 2.47 -2.12 0.06 2.24 -0.95 -1.42 0.96 0.59 - - -4.65 -2.86
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
- -2.96 1.01 -0.92 -0.43 -0.12 - - - - - - 2.78 -1.93 - - - - -3.9 -3.82 -1.32 - - -3.25 -1.3 - - -1.85 - -0.58 - - -1.22 2.02 - - - -5.25 - - - 1.84 4.28 -1.29 0.71 - - 2.3
- - - - - - 2.62 - - - - - - 2.04 - - - - - - - - - - - - - - - - - - 5.03 2.07 - - - -0.24 - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.56 - 3.6 - - 2.58 3.72 - - 1.48 1.12 - - - - - - - - -
- -5.22 - - - - -2.51 - - - - - - - - -4.57 - 0.06 - -6.32 - - - -0.92 -2.88 -1.3 0.44 - - -5.4 - -1.5 -2.22 0.07 - 1.85 3.72 -0.76 -4.17 - - 0.26 1.38 -0.87 1.35 4.01 - 1.14
- - - - - - 3.56 2.25 0.83 -0.14 - - - - - - - - -0.35 - - - - - - - - - - - - - - 0.85 - - - -2.28 - - - 3.78 - - 3.61 - - -
- -5.88 - - - - - - - - - - - -5.04 -4.44 -4.83 1.53 0.69 -4.32 -9.84 - -3.48 -5.53 - -4.23 - - - - -4.86 -4.55 -0.16 -1.64 0.92 -7.42 -1.29 -4.99 -2.8 -3.77 -3.26 -2.7 3.08 4.56 - 1.99 - - 1.59
- 1.59 - 3.34 - 3.07 - - - - 2.78 - - - - - - - 1.74 - - - - - - - - - - - - - - - - - - - - - - - - 4.02 - - - -
3.12 - - - - - - - - - - - - 4.55 - - - - - - - - - 3.98 - - - - - - - - - - - - - - - - - - - - - - - -
-3.66 -1.38 - - - - - - - - - 0.86 1.49 -0.91 0.22 1.64 0.62 - -1.97 -3.36 -1.98 1.3 -1.87 0.6 - 1.15 1.52 - -3.19 -2.12 -1.68 3.07 1.18 1.83 -5.74 0.74 0.87 -0.17 -0.35 - - 1.73 1.56 - - - - -1.95
- -0.21 - - - - - - - - - - - -3.19 -0.58 3.11 0.42 -1.31 - 0.41 0.11 -2.41 2.04 -0.96 -1.53 -1.57 - - -4.58 - -4.15 -1.11 0.77 3.77 -0.08 0.23 - 1.52 -2.51 - - -0.65 2.58 - - - - -1.3
- -5.26 - - - - -6.72 - - - -6.8 -5.79 -5.46 -1.0 -1.23 - - - -4.79 -4.82 - - - -6.14 -6.02 -7.76 - - - -6.19 -7.72 -3.81 0.69 4.42 1.27 -2.43 4.07 1.16 0.65 - - -1.59 - - -1.97 - - -
- -0.09 -2.87 -0.06 -2.23 0.57 -3.3 0.14 0.31 -3.15 -0.49 -3.76 2.91 -1.96 - -2.53 - 1.04 -5.45 -1.55 -11.54 -3.34 0.04 -1.57 -7.42 -1.28 -3.71 - -1.65 -5.23 -2.42 -5.57 -1.91 -11.15 0.12 0.44 -4.29 -0.2 -4.15 - - 0.17 4.14 -1.63 - 0.44 - 1.96
-4.62 0.68 -8.41 -9.49 -8.25 - -10.88 - - -8.81 -10.56 -8.66 -11.22 0.76 0.7 2.31 0.81 1.13 0.01 0.97 1.08 0.98 0.6 1.42 -4.54 2.06 -0.45 -6.23 -5.04 -7.12 -0.38 -2.36 0.16 -1.78 -0.68 1.77 1.69 1.37 0.96 -3.49 - -2.59 -2.61 -4.09 -2.37 1.56 - -3.77
-6.65 0.03 - -7.86 - -7.13 - -4.53 -4.38 -3.94 -3.79 -9.17 -7.62 1.27 0.67 1.12 -3.53 -3.67 -5.27 -0.47 -3.4 1.94 -4.24 3.16 -4.74 3.97 -0.62 - -9.1 -6.8 -2.05 -2.53 -0.21 -3.81 -5.27 2.08 -0.98 1.92 -1.47 -5.81 - - -6.79 - -6.76 - - -
- -0.68 - - - - - - - - - - - 2.25 - - - - - 2.73 - - - -1.36 - -1.38 - - 1.92 - - - 2.48 2.37 2.71 - 0.81 0.29 -0.47 - - - - - 3.38 - - -
- - - 3.08 - - 2.33 - - - - - - - - 0.42 - - - - - - - 1.51 - 1.69 1.32 - 4.38 - -1.0 0.44 0.38 - - - - -0.57 - - - - - - - - - -
- 0.37 - - - - - - - - - - - - - - - - - - - - 4.21 - - - - - - - - - - - - - - - - - - - - 4.82 - - - -
-4.4 -2.91 - - - - - - - - - - - 0.55 - 0.93 1.79 1.49 - -0.69 2.71 - - -1.64 - - - - - - - -0.83 - 2.98 - - - -2.6 -3.68 - - 3.94 2.44 - - - - 0.29
-5.13 -3.96 2.26 3.24 2.04 -1.52 2.87 - -2.38 - 0.26 -1.09 - -1.56 -0.97 - - -0.06 1.53 -3.67 -2.06 -2.39 - -2.96 - -2.05 -0.33 -1.74 -1.83 - -3.46 -1.02 -1.82 -2.64 -2.03 -1.96 -1.83 -2.13 -1.96 1.01 - 0.02 -1.88 -0.3 - 2.53 -0.48 -3.05
0.32 -2.85 - 0.91 0.9 - - - -0.45 0.92 1.88 - 0.81 -1.53 - - - - -0.81 -3.11 - - - -4.59 3.57 - -0.2 - 2.28 1.96 - -1.77 -1.34 - -2.09 - 3.22 -3.47 -4.12 - - - - - - - 0.45 -1.09
AT2G36870 (XTH32)
-7.42 -0.09 -7.83 -5.46 - - - - - -8.12 - -9.5 -9.33 -0.24 -1.22 -2.44 -4.95 -5.83 -4.49 -0.5 -4.16 2.41 3.25 -1.67 - -2.08 -7.08 -7.51 -1.54 -6.23 -3.8 0.53 0.89 2.27 2.36 3.2 -1.07 1.78 -1.0 -1.21 - 0.36 -2.09 - -4.54 - - -7.44
AT2G37678 (FRY1)
-1.17 -0.2 -7.28 -8.3 - -7.28 - -8.64 - -9.73 -8.43 - -6.76 0.06 2.54 0.37 1.91 1.73 -2.38 0.59 -0.27 0.66 0.56 -0.45 -1.94 -0.37 0.23 -1.29 -2.92 -3.06 -1.44 0.12 0.25 1.92 -0.08 0.71 0.15 0.48 -0.53 -1.41 -1.56 0.71 1.44 0.01 0.68 0.26 -2.6 0.03
AT3G22840 (ELIP)
-1.61 1.49 -5.43 - -5.27 -5.35 -6.1 -4.52 -8.56 -9.29 -10.27 - -3.17 -2.87 0.9 -1.16 2.96 -0.22 0.93 -1.65 1.94 -3.84 -2.95 -1.35 -2.46 -1.95 -1.21 -5.86 -5.14 -1.33 -1.18 2.71 -3.24 1.0 -4.59 -4.73 -4.05 -0.67 -3.52 -2.59 0.37 1.54 1.71 -1.38 -7.55 0.6 2.35 -0.1
- - 2.34 - - - - - 2.48 1.3 - - 3.7 - - - - - - - - - - - - - - - 1.4 - - 2.2 - - - - - 0.49 - - - - - - - - - 3.72
-4.3 -1.54 - - - - - - -4.17 - - - - - -0.96 -2.15 -2.53 - -2.48 -0.23 1.07 -3.59 -2.74 -0.52 - -0.03 -1.55 -1.69 -4.07 -6.69 -4.44 2.57 1.52 2.3 -3.23 - -3.89 -1.67 2.44 - - 3.58 -4.43 -4.16 3.19 - - -
-8.43 -3.46 -5.39 -0.86 - - -0.79 - -4.12 - -5.31 - - -1.96 -2.87 0.12 -7.34 -6.58 -4.39 -1.87 - -2.75 -2.98 -2.32 - -2.44 - - -3.17 -9.12 -5.23 -3.63 -0.84 2.66 -2.77 -4.09 - -2.38 - - - 2.36 1.04 - 4.88 - - -3.87
- -0.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.18 0.86 - 3.8 - - - - - - - 3.55 3.64 - 2.65 - - -
- - - - - - - - 4.94 - 4.0 - - - - - - - - - - - - - - - - - 0.51 - - - - - - - - - - - - - - - - - - -
- 0.85 - - - - - - - - - - - - - - - - 0.49 - - - - 1.96 - - - - 1.05 - 2.57 - - - - - - - - - - 4.42 - - 3.52 - - -
- - - - - - -3.68 - - - - -2.43 -3.86 - - - - - - - - - - -0.5 - -0.49 - - 1.95 - - 2.57 -2.16 -1.73 -3.78 1.48 - -0.87 - - - 4.11 2.71 - 3.09 - - -2.87
AT3G45150 (TCP16)
- 0.56 1.09 - - - - - 2.4 - 2.45 - - - - - - - -1.28 0.05 - - - 1.4 - -0.26 - - 2.43 - 1.23 - -0.56 3.38 -1.37 -0.5 - -2.03 - - - 2.49 0.58 - 0.57 - - -
AT3G49700 (ETO3)
- -4.67 - -1.12 - - - - - - - - - - - - -3.64 - -5.38 -4.58 - - - -5.71 - - -3.56 - -4.86 -5.29 - 3.87 -4.39 0.98 - -0.43 1.05 -4.2 - - - 3.29 2.07 -1.18 3.73 - - -4.57
- - - - - - - - -1.7 - -1.94 -2.24 -2.07 -3.12 - - -1.57 - -0.14 - - - - -0.02 - -1.86 -0.36 - 3.17 -1.54 - 2.01 -0.6 1.83 - -1.36 - 1.33 -5.12 - - 1.63 - - 4.31 - - -2.46
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT4G03050 (AOP3)
- -4.98 - -6.44 - - -6.9 - - -10.99 -9.36 - - -6.56 -8.19 -6.65 -7.02 -6.67 -4.95 -7.91 - -5.96 -8.24 0.29 1.05 1.46 5.04 1.28 2.21 -4.96 -5.6 -4.3 -7.65 -11.5 -6.75 -4.4 -3.0 0.64 -6.05 - - - -9.2 - -6.59 - - -10.4
- -0.3 - - - - - - - - - - - - 2.63 - - - - -0.31 - - - - - -0.57 - 1.67 3.26 - 0.69 0.91 1.61 3.58 - - - -1.76 -2.08 1.59 - - - 2.23 - - - -
- -2.88 - - - - - - - - - - - -0.58 - - 0.69 - - - - - - -1.12 - - - 1.0 3.5 - -0.49 0.19 2.47 4.17 - - 1.0 -0.57 - - - 1.89 - - - - - -
- - - - 4.81 - 4.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.67 - - - - - - - - - -2.86 - - - - - - - - - - - - - - - - - - - - 0.51 5.53 - - - - - - - - - - - - - -
-6.06 -5.81 - - - - - -0.5 - 0.28 - - 5.2 -1.93 - - - - -3.84 -5.57 - - - -0.16 - -2.42 - - 1.6 - 0.03 - -4.39 1.95 - - - -6.22 - - - - - - - - - -
-3.26 - - - - -2.38 -2.06 - - - - - - - - - - - - - - - - - - - - - 1.05 - - -0.46 -3.5 -0.01 - - - -5.44 - - - 4.33 1.88 -1.42 4.18 - - 0.33
-10.48 -12.15 - -11.86 - -11.21 - - -12.2 -10.13 -11.4 - -11.53 -10.84 - - -6.45 -2.98 -13.45 -13.95 -11.96 - - - -11.24 -13.9 -11.95 - -11.67 -11.99 -14.21 -1.06 -1.57 3.06 -10.41 -10.24 -11.72 -7.65 -4.44 - - 2.13 4.49 -4.78 2.98 - -15.51 1.92
AT4G14690 (ELIP2)
-1.07 0.13 -9.16 -5.96 -6.88 - -6.16 -6.99 - -9.57 - - - -3.48 1.03 -2.52 -0.24 -4.18 -5.68 -2.64 -3.9 -5.07 -4.24 0.8 -4.26 -0.53 -1.32 4.12 1.48 -7.72 -1.39 2.55 -1.59 2.22 -4.88 -4.05 -4.79 -0.33 -2.51 0.28 -3.33 -0.38 -0.48 -2.2 -6.06 - 0.71 1.48
- -4.13 - - 3.82 4.72 - 1.19 -0.62 -0.2 0.42 - - - - - - -0.61 - -3.33 - - - - - - - - -0.67 - -2.9 - - - - - -0.46 -2.58 - - - - - - - - - -
- -3.19 - - -0.3 -0.18 - - - - - - 5.52 - - - - - - - - - - - - - - - - - - - -2.76 -2.46 - - - -3.41 -29.27 - - - - - - - - -
- -4.56 - 0.72 - - 1.35 -1.38 - - 0.09 - 3.85 - - - - - - -4.34 - -0.81 - - - - - - -2.28 - - -2.51 - -3.1 - - - -5.4 - - - 4.31 2.8 - - - - -
-6.81 -7.22 - - - - - - - - - - - -5.39 - - -5.78 -3.89 - - - -3.03 - -5.67 - - - - - - - 0.66 -0.84 1.75 - -2.84 - -4.81 -4.81 - - 3.58 4.77 - 0.65 - - 0.38
- -8.91 - - - - - - - - - - - -6.73 - - -5.47 -4.23 - - - - - -10.78 - - - - -8.61 - - -0.86 -2.63 1.41 - -3.84 - -5.97 -5.83 - - 3.62 4.92 -4.27 0.3 - - -0.64
- - 3.09 3.2 3.28 - 3.05 - - - - - - - - - - - - -2.37 - - - - - - - - -1.16 - -0.75 -0.48 - -1.81 - - - -4.06 - - - 2.18 - 0.86 1.86 - - -
AT5G13910 (LEP)
-7.74 -6.32 - - - - - - - - - - - -5.96 -4.71 -5.8 -7.44 -3.96 - -7.8 - -4.6 -6.34 -6.56 -6.7 -6.11 -5.91 - - -8.18 -6.27 -0.24 -1.23 0.31 -6.23 -3.78 - -2.65 -7.59 -2.27 - 3.09 5.02 -3.37 1.35 - - 0.32
AT5G16580 (BGLU2)
- 1.84 0.19 - 0.2 - - - - - - - - 1.78 - - - - - -1.89 - - 2.73 1.82 - 2.37 - - - - - -0.98 - - 0.2 3.67 0.77 2.36 -2.12 - - - - - 0.75 - - -
- -0.06 - - - - - - - - - - - -2.98 -0.89 -3.5 -2.75 -1.53 -1.65 -1.97 -3.46 -3.16 -4.06 -2.46 -1.32 -2.71 1.98 -3.93 -3.28 -3.24 -3.93 1.97 -0.35 1.5 -0.09 -3.23 -3.01 -0.79 -2.23 -4.85 - 1.89 1.42 3.31 2.13 - 2.4 2.16
- 2.29 - - - - - - - - - - - -1.28 - - -0.66 - - - - - - 3.18 - 4.62 -0.7 1.54 -0.05 - -2.96 - - - -1.66 1.02 - 0.53 - - - - - - - - - -
- - - - - - - - - - - - 4.43 - - - - - - - - - 4.2 - - - - - - - - 1.94 - 2.08 - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT5G36870 (gsl09)
- -2.05 0.01 2.8 1.38 0.9 2.88 -0.16 -0.39 -0.83 -0.18 - -2.58 -2.28 0.16 -4.33 -2.52 0.96 -1.83 -2.03 -3.3 -4.32 -0.82 -2.69 - -2.47 -5.49 - 2.29 -5.58 -4.24 0.86 -1.6 -0.97 -2.46 -2.19 -4.39 -1.4 -5.51 -1.63 - 0.22 0.87 -3.11 2.58 - -8.39 0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.