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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.4 | 0.17 | -2.61 | -1.14 | -1.4 | -2.83 | - | 1.12 | 1.14 | -0.28 | - | - | 0.88 | - | -1.53 | - | - | -2.8 | 1.0 | 1.94 | 1.55 | 0.52 | 0.38 | 0.96 | 1.21 | 0.74 | 1.18 | 0.58 | 0.83 | 0.22 | -0.99 | -1.06 | -2.01 | -2.0 | -1.68 | -1.06 | -0.63 | -2.33 | -1.0 | -0.64 | -1.64 | -1.96 | 0.14 | 0.61 | 0.74 | 0.56 | 1.05 | -1.83 | -1.12 | -0.77 | 0.69 | 0.59 | 0.36 | 0.21 | 0.41 | -1.18 | |
| -0.62 | -0.73 | - | -0.24 | 1.08 | -0.0 | 0.05 | 0.93 | 1.35 | -0.02 | - | -1.36 | -0.74 | - | - | 0.17 | - | 1.3 | -1.51 | -1.58 | 0.07 | -1.58 | 0.48 | 0.36 | 1.12 | 1.18 | -1.53 | 0.69 | 0.82 | 1.32 | -0.23 | - | - | -1.46 | -0.52 | -0.23 | - | -0.19 | 0.17 | 0.97 | -1.18 | -2.63 | 0.43 | 0.11 | 2.27 | -1.38 | 0.57 | -0.98 | -0.06 | -0.23 | -0.47 | -0.93 | -0.17 | 0.34 | 0.69 | -0.92 | |
| - | - | - | - | - | - | - | - | 2.99 | 0.56 | - | 2.33 | - | - | 0.89 | - | - | - | - | - | - | 1.1 | - | - | - | 1.28 | - | - | - | 3.0 | -0.11 | - | 2.69 | 2.22 | - | - | 1.91 | - | - | - | - | - | - | - | 2.09 | 1.29 | - | 0.82 | 1.06 | - | - | - | - | - | - | -0.42 | |
| - | 1.76 | - | - | - | - | - | - | 2.32 | 1.0 | - | 0.79 | - | - | - | - | - | - | 0.73 | 0.97 | 1.95 | 1.26 | - | 1.63 | - | 1.95 | - | - | - | - | -0.88 | - | 0.25 | -0.09 | - | - | - | -0.26 | - | - | -0.1 | - | 1.05 | - | 2.45 | 2.31 | 2.22 | -1.3 | -2.05 | - | - | 0.5 | 0.43 | - | - | 1.05 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.