Heatmap: Cluster_9 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-8.21 -9.79 -1.86 -0.19 1.93 3.8 1.6 3.91 3.13 -1.27 -0.69 - -5.33 -10.53 -0.89 -10.84 -6.59 -8.55 -0.74 -8.96 - -10.25 - -10.11 - -8.73 - - - - - -11.82 -12.23 -9.72 -11.45 - -9.99 -10.59 -13.46 - - - -8.15 -8.15 -8.73 - - -7.87
AT1G07540 (TRFL2)
-7.53 -5.63 -1.37 -3.31 1.82 4.12 0.69 3.7 2.96 -0.79 0.01 - -0.28 -8.54 -0.11 -7.05 - - -0.64 -6.95 - -8.05 -9.9 -7.37 -5.52 -7.22 -9.01 -9.76 -5.8 -5.0 -10.42 -10.8 -12.29 -10.3 -11.42 - - -6.96 -11.79 - - - -7.79 -9.21 - - - -10.97
0.49 -2.75 -1.64 -0.42 2.26 4.16 1.71 2.98 1.87 -1.28 -0.95 -5.12 0.15 -3.12 -1.71 -4.47 -3.48 -3.27 -1.28 -3.86 -6.26 -3.82 -3.84 -1.63 -3.63 -2.83 -5.73 0.46 -1.12 -4.63 -2.56 -3.85 -4.86 -3.91 -3.57 -2.15 -3.02 -2.0 -4.9 - - -4.87 -5.8 -1.1 -2.22 - - -1.76
-7.94 -10.99 -1.53 -2.63 2.09 3.81 0.39 3.76 2.93 0.24 0.7 -10.14 -0.62 -9.19 0.7 -7.86 -8.48 -7.14 0.64 -7.08 - -8.46 - -7.06 -9.69 -8.37 -6.6 - -10.72 - -9.13 -8.08 - - -9.82 - - -12.95 -12.12 - - - - - - - -8.95 -
- - -1.74 -5.31 1.11 4.33 -1.42 3.97 2.95 -0.51 -1.08 - - - -1.21 - - - -3.4 -8.8 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT2G06983 (SCRL16)
- - -1.08 -2.71 1.45 4.31 0.36 3.68 2.72 -0.52 -0.74 - -4.28 - 0.72 - - -7.11 0.14 -7.85 - -7.09 - -8.94 -4.99 - - - - -6.15 - -4.56 - - -10.61 - - - - - - - - - - - - -
AT2G16130 (PMT2)
-8.59 -12.18 -1.53 -4.97 0.46 4.72 1.46 2.89 2.52 -1.14 -0.96 - 0.87 - -0.19 - - -9.28 -2.25 -7.85 - - - -8.18 - - - - - - -5.74 -10.82 - - - - - - -12.51 - - - - - - - - -
- -9.12 -1.66 -0.28 2.37 4.13 1.92 3.51 2.72 -1.22 -1.49 -12.02 -4.3 -9.19 -3.1 - -8.45 -6.61 0.49 -8.37 - -7.21 - -9.08 -7.66 -10.29 - - - -10.05 - - - - -12.21 - - -11.06 - - - - - - - - - -
AT2G32890 (RALFL17)
- -10.57 -1.49 -0.04 2.56 4.55 2.46 2.62 2.21 -1.69 -1.57 - -6.25 -8.72 -2.5 -10.37 - -8.74 -2.53 -9.41 - -8.78 -9.28 -10.15 - -10.41 - - - - - -10.35 -7.33 -9.78 -10.8 - - -10.16 -8.75 - - - - - - - - -
AT3G08560 (VHA-E2)
-5.92 -9.02 -0.32 -0.06 2.68 4.26 1.47 3.48 2.17 -1.16 -1.47 -10.99 -5.29 -10.45 -0.56 -8.25 -7.63 -7.72 -0.58 -7.88 - -5.96 -10.42 -7.94 - -11.57 -8.78 -8.37 -5.97 -7.69 -11.38 -7.45 -10.53 -11.03 -8.92 -9.48 -6.82 -9.72 -7.45 -7.6 -10.07 - - - -9.4 -7.07 -6.71 -9.23
- - -1.1 -0.12 2.43 4.54 1.34 3.2 1.88 -0.95 -1.57 -4.65 -7.58 - -0.2 - - - -0.59 -8.24 - -7.16 - -8.55 - -8.81 - - -7.46 -8.53 - -8.73 - - - - - - - - - - - - - - - -
- -7.68 0.28 -1.1 2.85 4.53 1.17 2.48 2.42 -1.46 -0.73 -9.17 - - -0.7 - - - 0.22 -8.26 - - - -6.13 - -5.51 - -7.21 -4.63 - - - - - -11.83 - - -11.17 - - - - - - - - - -
- - 0.33 -1.8 1.52 4.28 0.46 3.39 3.18 -1.4 -1.71 -6.12 - -10.33 -0.06 -9.88 - -8.1 0.71 -8.25 - -6.23 - -8.94 - - - - - - - - - -9.89 -11.47 - -8.53 -11.45 - - - - - - - - - -
- -11.1 -0.09 -2.37 1.02 4.01 -0.74 3.94 3.41 -1.43 -1.24 -6.47 - -7.99 -0.33 - -8.01 - -0.9 -7.44 - - - -8.09 - -7.28 - - - -9.61 -10.26 -8.11 -9.07 -9.88 -9.81 - - -8.26 - - - - - - - - - -
- - -0.36 -1.77 2.72 4.65 1.87 2.72 1.8 -1.62 -2.05 - - - -0.55 - - - -1.87 -8.26 - - - -7.15 - - - -4.09 -6.87 - - - - -8.77 -10.34 - - - - - - - - - - - - -
- -9.8 -1.26 -4.51 1.65 4.52 0.2 3.76 2.3 -1.34 -1.46 - -7.2 - -1.43 -7.74 - - -0.95 -8.09 - -3.97 - -6.78 - - - - - -6.29 - -5.85 - - - - -5.39 - - - - - - - - - - -
-10.51 -12.6 -2.04 -6.42 -0.6 4.07 -0.06 4.11 3.16 -0.93 -1.5 - -6.3 - 0.08 - - -8.87 0.04 -9.16 - -9.48 - -10.0 - -12.12 - - -11.39 -11.85 -9.88 -11.05 - - -12.05 - - -14.29 - - - - - - - - - -
- -11.16 -1.8 0.76 2.06 3.94 2.25 3.76 2.68 -1.39 -1.26 -14.7 -5.51 -10.18 -1.35 -11.49 - -9.53 -0.77 -9.55 - -11.86 - -11.52 - -10.82 -10.57 - - -15.47 -12.11 -12.69 - - -14.29 - - -14.3 - - - - - - - - - -
- - -0.26 -0.47 0.83 4.06 -0.11 3.91 1.12 0.98 -0.49 -3.31 2.27 -5.58 -0.76 - - -5.1 0.55 -8.12 - -4.59 - -6.71 - - -4.52 - - - -6.16 - - - -8.52 - - - - - - - - - - - - -
- -9.65 -0.5 -0.1 2.61 4.01 1.15 3.91 2.12 -0.77 -1.11 - -1.08 - -1.52 - - - -0.57 -9.27 - -6.72 - - - - - - - - - - - - -10.18 - - - - - - - - - - - - -
- -9.31 -1.44 -3.67 1.44 4.25 0.3 4.06 2.1 -0.69 -2.27 -5.27 -6.68 - -0.35 - -7.18 - 0.94 -7.69 - -6.93 - - - - - - -8.36 - - - -8.82 - - - - - - - - - - - - - - -
- - -1.23 - 1.5 4.41 -0.98 4.1 2.03 -0.99 -1.88 - -4.68 - -1.75 - - - -0.71 - - - - - - - - - - -5.6 -6.28 - - - - - - - - - - - - - - - - -
AT3G23727 (SCRL12)
- -10.58 -1.12 -0.55 1.87 4.0 0.99 3.91 2.91 -0.91 -0.72 - -4.57 - -0.67 - - - -0.35 -10.36 - - - -7.83 - -9.32 - - - - - - - - - - - - - - - - - - - - - -
- -6.26 0.15 -1.24 2.48 4.78 1.03 2.66 1.87 -2.47 -2.24 - - -6.26 -3.16 -4.3 -4.3 - -3.33 -7.74 - - - -5.1 - - -2.68 - -5.57 -3.76 - -3.59 -6.07 -2.94 - - - -6.94 - - - -3.23 - - - - - -
- -11.66 -1.16 - 0.67 4.37 - 4.44 -1.96 -0.67 -7.64 - -8.21 - 0.17 -9.6 - - 0.66 -7.3 -5.91 - - -8.98 - -9.44 - - -9.7 - -10.72 -9.9 - - -12.24 - - -11.36 - - - - - - -7.26 - - -
- -9.1 -1.42 -1.81 1.62 4.3 1.31 3.79 1.5 0.06 -0.45 -7.47 0.52 -9.21 0.56 - - -8.28 -0.35 -7.09 - -8.39 - -8.99 - -8.05 -5.61 - -6.58 - -8.79 - - - -10.91 - - -9.83 - - - - - - - - - -
AT3G43083 (LCR33)
- -10.77 -2.04 -4.62 1.07 4.07 -0.7 3.95 3.19 -0.78 -0.93 - -3.11 - -0.48 - - -6.19 0.74 -7.65 - - - - - - - - - - - - - - - - - -11.76 - - - - - - - - - -
- - -1.15 -0.41 1.92 4.44 1.65 3.17 2.42 -0.74 1.1 - - - -1.8 - - - -0.47 -9.56 - - - -7.33 - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.66 -1.39 0.94 4.55 1.29 3.64 1.93 -1.17 0.22 - - -5.35 -0.48 - - - -1.0 -8.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -10.1 -1.97 -5.04 0.35 3.97 -0.24 4.2 3.21 -0.97 -0.65 - -4.75 - -1.86 - - - -0.35 -9.23 - - - - - - - - - - - -9.63 -10.04 - - - - -7.63 -9.42 - - - - - - - - -
- - -0.79 - 0.5 4.1 -0.31 3.97 2.85 -0.35 0.47 - -0.3 - -1.15 - - - 0.76 -7.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -9.53 -1.73 0.87 2.28 4.06 2.65 3.46 2.25 -1.2 -1.31 -5.11 -2.78 - -1.75 - - -8.84 -0.04 -8.19 -8.88 -8.95 - -9.79 - -10.62 - - - -10.32 - - - - - - - -12.86 - - - - - - - - - -
-1.25 -9.0 -0.33 1.55 2.35 4.26 2.55 2.91 2.21 -1.61 -1.65 -9.6 -4.59 - -1.1 - - - -1.21 -9.0 - - - -10.74 - - - - -7.22 -10.26 -8.6 -10.15 - - - - - - - - - - - - - - - -
-11.43 -10.25 0.91 -0.22 2.03 3.83 0.82 3.75 2.89 -1.25 -1.25 -12.87 -1.34 -10.33 -0.53 -10.86 -8.15 -7.42 1.05 -8.32 -9.97 -7.91 - -11.9 - - -8.16 - - -11.41 -10.16 - - - -11.25 - - -14.02 - - - - - - - - -1.84 -
-9.37 -3.81 -1.39 -0.92 2.39 4.4 1.42 3.34 2.17 -1.17 -2.05 -2.39 -5.12 -5.24 -1.33 -6.11 -3.09 -2.87 0.02 -4.25 -6.04 -4.66 -4.04 -5.71 - -6.53 -8.31 -4.39 -9.07 -6.45 -4.93 -7.88 -5.35 -6.81 -4.92 -5.4 -7.8 -5.72 -5.77 -6.58 - -7.31 -6.91 -7.05 -8.22 -1.82 -12.99 -10.45
- - 0.32 -1.72 2.42 4.76 -0.86 3.23 0.99 0.18 -0.8 - - -5.16 -2.64 - -3.79 - -3.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT4G10115 (SCRL20)
- -11.51 -1.44 -2.57 1.96 4.48 0.7 3.62 2.07 -1.15 -1.04 - -1.36 - -0.58 -9.46 -6.36 -8.68 0.17 -8.67 - -8.65 - -10.5 - - - - - - - - - - -10.27 - - - - - - - - - - - - -
- -9.87 -1.43 -0.41 2.57 4.07 1.9 3.31 2.86 -1.53 -0.53 - -1.03 - -0.12 -11.1 -10.16 -8.16 -0.42 -7.54 - -6.32 - -7.86 - -9.38 - - - -9.06 -12.46 -8.34 - - -9.64 - -7.97 -12.36 -10.56 - - - -10.02 - -9.99 -8.66 -12.27 -
AT4G14785 (SCRL23)
- -9.1 -1.31 -2.86 1.29 4.51 0.13 3.59 2.8 -1.18 -1.56 - -2.85 - -0.57 - - - -1.16 -8.15 - - - -12.29 - - - - -8.12 -8.57 - - - - - - - - - - - - - - - - - -
-5.76 -10.46 0.36 -1.07 2.53 4.4 1.07 3.4 1.44 -1.31 -2.62 -6.95 -0.28 - 1.12 - -6.29 - -1.97 -7.84 - - - -9.22 - - -6.97 -5.98 -6.02 - - - - - - -7.08 -5.49 -11.02 -6.92 - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
- -14.56 -1.6 -2.39 0.81 3.83 0.17 4.57 2.0 -0.7 -1.84 -11.29 -5.18 -12.99 -1.2 - - -8.08 0.27 -8.55 - - - - - -11.68 - - - - - - - - -13.25 - -11.18 -15.7 - - - - - - - - - -
AT4G29305 (LCR25)
-13.96 - -1.68 -2.42 0.83 4.15 1.17 3.98 3.01 -0.81 -0.37 -10.16 -5.52 - -4.04 - - -9.13 -1.28 -11.04 - -8.76 - - - - - - - - - - - - - - -8.7 -5.67 - - - - - - - - - -
AT4G32714 (SCRL25)
-13.84 -11.37 -1.52 -1.86 1.9 4.53 0.9 3.25 2.48 -1.3 -1.75 - -0.79 - 1.02 - - - -1.97 -9.21 - - - -10.52 - -11.29 - - - - -11.56 - - - -12.28 - - - - - - - - - - - - -
AT4G32717 (SCRL24)
- - -2.15 - 0.75 3.96 -0.4 4.15 2.64 -0.52 -1.98 -7.78 -2.64 - 1.91 - - - -0.1 -9.07 - - - -12.33 - - - - - - - - - - - - - - -10.51 - - - - - - - - -
-8.51 -7.97 1.71 -5.67 2.2 4.18 -2.86 4.06 -0.19 -0.51 -2.07 -2.48 -2.05 -9.92 0.55 - -8.42 -6.28 0.32 -7.48 - -8.66 - -8.32 - - -8.35 - -3.49 - -9.61 -10.23 - - -9.78 - -8.4 -12.98 - - - - - - - - -12.42 -
- -3.4 -1.88 - 2.42 4.36 - 4.05 - -0.34 -1.68 - -0.93 - 1.67 - - - -3.1 - - - - -2.75 - - - - -3.74 - - - - - - - - - - - - - - - - - - -
- -6.91 -1.52 -3.76 1.36 4.48 0.86 3.35 2.49 -1.25 -1.85 - 0.0 -9.62 1.32 -7.33 -9.09 - -0.47 -6.61 - -8.07 -8.82 -8.66 -7.23 -6.9 -8.02 -6.46 -8.65 -6.81 -10.28 -8.96 -7.82 - -9.32 - -8.78 -7.54 -7.86 - - - - - - - - -
- -9.35 -0.81 -5.75 2.05 3.87 -2.13 4.03 2.49 -0.06 1.02 -9.17 -1.89 -9.4 -0.82 -10.52 -7.75 -6.69 1.37 -7.65 -7.72 -8.15 - -8.49 -9.8 -8.58 -9.52 - - -11.18 -9.72 -10.64 - - -10.09 - -10.28 -14.01 -12.2 - - - - - - - - -
AT5G45875 (SCRL27)
- -9.75 -1.05 -3.63 2.89 4.89 -2.21 2.91 -1.72 -0.64 - - - -5.33 -0.0 - - -6.3 -0.78 -9.01 - - - - - - - - - - - -7.98 - - - - - - - - - - - - - - - -
- -10.76 -2.75 -4.66 0.9 4.3 0.11 3.77 2.56 -0.27 -0.09 -7.56 -3.24 -7.59 0.57 - - - 1.21 -7.51 - -7.43 - - -7.41 - - - - - - -9.0 - - - - - - - - - - - - - - - -
- -8.72 0.71 0.45 2.68 4.28 2.03 2.87 1.7 0.47 -0.74 -6.61 -1.76 -8.27 0.04 -8.56 - - 0.17 -7.12 - -7.49 - -7.74 - -8.05 -5.24 - -7.16 -8.32 -9.92 - - - -10.46 - - -10.92 -11.15 - - - - - - - - -
-6.69 -4.48 -0.47 -1.35 1.7 4.15 1.45 3.24 2.84 -0.3 1.08 - -3.27 -4.39 -0.95 -5.89 -6.12 - 0.02 -4.48 - - -5.85 -7.57 -6.33 -4.38 - -4.81 -3.38 -5.38 -6.35 -5.7 -6.17 -5.81 -5.64 -3.92 -3.6 -6.25 -5.61 -0.53 - -1.6 -3.52 -5.25 -3.25 - - -6.93
-1.32 -1.87 1.24 -0.57 2.9 4.46 1.03 2.32 0.88 -1.41 -2.12 -3.44 - -2.17 -0.91 -1.96 -1.79 -1.88 -2.04 -3.93 -6.22 -2.67 -2.82 -2.47 - -2.91 -8.45 -4.88 -1.06 - -3.71 -3.74 -2.63 -2.01 -3.23 -0.92 -3.77 -2.44 -4.19 -5.54 - -1.39 -4.55 -7.65 -1.68 - - -6.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.