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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -4.16 | -2.55 | -0.81 | 1.53 | -2.2 | -2.57 | -2.94 | 1.66 | -2.01 | 1.26 | -3.03 | 0.51 | -0.53 | 0.06 | 1.38 | -3.27 | 2.1 | -2.77 | 1.95 | -4.15 | -1.95 | -1.26 | -1.58 | -1.75 | -2.96 | -1.36 | -2.86 | -3.97 | -3.31 | -3.85 | 0.87 | 0.73 | 0.18 | 0.69 | -0.17 | 0.76 | 0.81 | 1.12 | 1.83 | 1.41 | 0.29 | -0.34 | -2.25 | -3.21 | -1.82 | -2.31 | -2.67 | 0.97 | 0.7 | -2.43 | -0.6 | -0.4 | -2.62 | -3.37 | -0.35 | 0.35 | |
| -3.64 | -3.02 | -3.61 | -1.51 | -6.6 | -4.17 | -6.73 | 0.87 | -2.3 | 1.8 | -3.72 | 0.49 | -0.57 | 0.11 | 1.3 | -4.34 | - | -4.57 | 2.18 | -3.86 | -3.8 | -2.0 | -2.56 | -2.3 | -3.41 | -1.28 | -3.51 | -4.55 | -3.35 | -4.21 | 0.79 | 0.27 | 0.09 | 0.63 | 0.14 | 0.58 | 0.7 | 1.28 | 1.27 | 1.33 | 0.2 | -0.58 | -1.95 | -3.25 | -0.75 | -3.32 | -4.02 | 0.15 | 0.05 | 0.2 | 1.89 | 1.93 | -0.53 | -0.65 | 2.08 | 0.58 | |
| -3.22 | -2.45 | -0.16 | 2.0 | -1.59 | -1.28 | -2.09 | 2.43 | -1.9 | 1.62 | -1.82 | -0.19 | -1.02 | -0.57 | 0.62 | -1.9 | - | -1.83 | 1.87 | -3.49 | -1.39 | -0.94 | -1.02 | -0.73 | -2.15 | -1.35 | -2.36 | -3.21 | -2.65 | -3.0 | 1.0 | 0.62 | 0.37 | 0.78 | 0.52 | 0.95 | 0.93 | 1.47 | 1.63 | 1.5 | 0.39 | -0.21 | -0.84 | -2.66 | -1.09 | -1.6 | -2.16 | -0.32 | -0.59 | -2.36 | -0.33 | -0.29 | -2.3 | -3.08 | -0.13 | -0.3 | |
| -1.71 | -0.82 | - | -0.11 | -2.41 | -2.16 | - | 2.46 | -1.58 | 1.67 | 0.05 | 0.66 | -0.84 | -1.43 | 1.94 | - | - | - | 1.66 | -2.71 | 1.03 | -1.65 | -0.03 | -0.92 | -0.08 | -1.13 | -2.62 | -1.14 | -2.86 | -2.18 | -0.46 | -0.73 | 0.4 | 0.26 | 0.22 | -1.21 | -0.69 | 0.56 | -0.02 | -0.89 | -0.92 | -1.17 | -0.12 | -1.18 | -4.67 | -3.48 | -1.94 | 1.1 | 1.41 | -0.44 | 1.21 | 0.94 | -0.33 | -1.03 | 1.55 | 1.07 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.