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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | -1.86 | -1.64 | -0.13 | 0.44 | -0.17 | -0.08 | -0.88 | 0.06 | -1.4 | - | 0.2 | -0.46 | 1.25 | 0.17 | - | - | -2.41 | -1.62 | -2.04 | -1.65 | -0.96 | -3.24 | -0.77 | -1.82 | 1.17 | -0.92 | -3.35 | -1.9 | -1.39 | 0.83 | -0.84 | 0.02 | -0.07 | 0.26 | 0.84 | 0.43 | 0.47 | 0.62 | 0.65 | 0.11 | 0.14 | 0.56 | -0.3 | -0.39 | 0.07 | -0.56 | 0.36 | 0.24 | 1.03 | 0.97 | 0.31 | 1.56 | 1.42 | -0.29 | 1.04 | |
| 1.65 | -0.38 | -0.97 | -1.07 | -2.83 | -2.37 | - | -0.61 | -0.71 | -0.43 | - | -0.22 | -1.36 | 1.61 | -0.36 | - | - | -2.57 | -0.58 | -0.68 | -0.98 | 0.03 | 0.34 | -1.78 | 0.55 | 0.88 | -1.18 | -0.77 | -2.23 | -2.55 | 0.46 | -0.24 | 0.05 | 0.43 | -0.28 | 0.6 | -0.47 | 0.62 | 0.23 | 0.39 | 0.97 | 0.1 | -0.98 | -0.55 | -0.84 | 0.86 | 0.28 | 0.36 | 0.28 | 1.05 | 0.5 | 0.17 | 1.32 | 1.08 | -0.54 | 1.33 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.