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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.6 | -0.79 | -1.08 | -0.54 | -0.37 | 0.27 | -2.65 | -0.67 | -2.61 | -0.47 | -2.41 | -2.16 | -1.49 | -4.52 | -2.31 | -1.18 | 4.66 | -1.14 | -0.45 | -1.06 | -0.81 | -0.74 | -1.04 | -1.61 | -1.08 | -1.49 | -1.49 | -0.92 | -1.1 | -0.88 | -0.13 | 0.02 | -0.11 | -0.01 | -0.31 | 0.02 | -0.17 | -0.02 | -0.03 | -0.31 | 0.06 | -0.52 | -1.39 | -1.83 | -1.59 | -0.72 | -0.7 | -2.49 | -2.52 | -0.9 | -1.07 | -0.9 | -1.12 | -1.28 | -0.95 | -1.64 | |
| -3.79 | -3.9 | -2.68 | -2.41 | -2.34 | -2.14 | - | -2.67 | -5.75 | -0.03 | -0.5 | -2.52 | -1.18 | -5.13 | -3.37 | - | 5.22 | - | -0.37 | -1.86 | -2.69 | -1.73 | -1.69 | -1.0 | -2.86 | -2.77 | -2.12 | -3.81 | -1.94 | -2.26 | -0.61 | 0.47 | -0.82 | -0.87 | 0.24 | -0.37 | -1.42 | -0.23 | -0.13 | -0.21 | -0.79 | -1.13 | -1.94 | -2.02 | -2.76 | -2.45 | -3.61 | -4.14 | -4.43 | -2.09 | -1.78 | -1.89 | -2.25 | -1.76 | -1.83 | -2.53 | |
| -1.52 | -1.98 | -3.56 | -3.7 | -2.75 | -0.39 | -0.65 | -1.94 | -2.59 | -0.34 | -2.17 | -1.05 | -1.22 | -1.37 | -1.31 | -1.95 | 4.82 | -2.83 | -0.55 | -2.35 | -1.2 | -0.88 | -1.66 | -0.89 | -1.5 | -0.59 | -2.66 | -1.35 | -1.09 | -1.39 | -0.11 | -0.03 | -0.0 | 0.29 | -0.21 | -0.15 | -0.26 | -0.3 | -0.19 | -0.31 | 0.2 | -0.82 | -2.72 | -3.07 | -3.72 | -1.48 | -0.62 | -2.62 | -2.93 | -0.39 | -0.99 | -0.77 | -0.05 | -1.12 | -0.66 | -1.9 | |
| -4.98 | -3.5 | -4.87 | - | - | - | - | - | -6.69 | -1.48 | -3.34 | -5.7 | -2.54 | -6.34 | -5.14 | - | 5.33 | - | -1.22 | - | -3.88 | - | -4.88 | -2.68 | - | -3.01 | - | - | -5.13 | -5.04 | 0.12 | 0.07 | 0.08 | 0.36 | -0.13 | -0.41 | -0.28 | 0.27 | 0.1 | 0.33 | 0.61 | -0.81 | -5.1 | - | - | -5.75 | - | -6.25 | -7.93 | -2.29 | -1.68 | -1.82 | -2.97 | -2.38 | -1.53 | -4.24 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.