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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.31 | 5.57 | - | - | -6.99 | - | - | -6.23 | -4.42 | - | - | - | - | - | - | - | - | - | - | -4.38 | - | 1.17 | - | - | -3.91 | 0.81 | - | - | - | - | -5.74 | - | - | -6.2 | - | -4.4 | -6.56 | - | -5.17 | -6.69 | - | -5.3 | - | - | - | -6.4 | 1.35 | -3.98 | -2.62 | - | -6.24 | -5.35 | - | - | -4.29 | -6.32 | |
0.32 | 5.34 | -2.82 | -2.14 | -6.64 | -4.49 | - | -0.17 | -2.44 | -3.96 | - | -3.88 | -3.67 | -3.92 | -2.81 | -4.15 | - | - | -4.3 | -2.78 | -0.77 | 0.68 | -0.98 | -5.28 | -3.52 | 0.03 | - | - | -5.41 | - | -1.52 | -1.95 | -2.11 | -1.17 | -0.95 | -1.4 | -1.06 | -1.25 | -1.64 | -1.1 | -1.79 | -1.25 | -3.44 | -2.26 | -2.37 | -1.15 | 0.9 | -1.99 | -2.13 | -3.88 | -5.52 | -4.14 | -5.74 | -3.01 | -3.93 | -3.51 | |
0.76 | 5.49 | -4.22 | -5.7 | - | - | - | -0.25 | -3.69 | -3.86 | -5.09 | - | -4.69 | -4.67 | -1.77 | - | - | - | - | -5.02 | -1.16 | 1.31 | -2.9 | -3.95 | -3.93 | -0.08 | - | - | -3.38 | -4.39 | -5.81 | -3.91 | - | - | - | -4.64 | -4.54 | - | - | -3.45 | - | - | -4.65 | -2.79 | -2.03 | -1.61 | 1.18 | -3.25 | -3.16 | -5.4 | - | -5.17 | - | -5.29 | - | -4.26 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.