Heatmap: Cluster_187 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-1.13 5.02 -3.19 - - - -2.67 - - - - -2.47 - 1.9 -1.64 0.41 - - -0.75 2.21 -2.84 -3.14 - -1.55 - -0.58 - - - - 0.45 - -3.29 - -1.18 - - -0.19 - - - - - - - - - -
-1.98 5.56 - - - - - - - - - -0.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.74 4.33 - - - - - - - - - - - 2.14 - - - - - - - - - -1.33 - - - - - - - - - 2.52 - - - 1.49 - - - - - - - - - 2.98
AT1G16910 (LSH8)
-0.29 1.26 - -1.78 -0.07 -0.44 - - - - - -4.0 - 0.87 0.33 -0.4 - - 1.28 3.72 -2.1 2.99 2.6 -1.28 - -0.66 - - -0.75 -3.54 0.72 - -2.57 -2.51 -2.17 - - 1.78 -3.18 - - - - -0.07 -0.65 - - -
4.06 4.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.07 3.38 1.31 0.81 1.42 0.4 0.88 - - -1.93 - - - 0.44 - -2.42 -1.7 - -0.24 0.71 0.37 -0.17 0.09 -1.47 -1.77 -1.97 - -1.39 1.83 - 0.31 -0.89 -1.46 -0.44 0.33 - -1.39 -0.02 -2.18 - - -0.5 - 1.98 0.91 - - 0.75
- 2.98 - - - - 4.93 - - - - - - 1.82 - - - - 1.33 1.34 - - - -2.24 - - - - - - - - - - - - - - -0.42 - - - - - - - - -
- 4.0 2.3 2.47 - - - - - - - - - - - - - - 2.47 3.5 - - - 1.23 - 0.41 - - - - -0.02 - - - - - - - - - - - - - - - - -
3.71 4.65 - - - - - - - - - -7.85 - 0.65 - - - - - - - - - -2.0 - - - - - - - - -0.48 1.37 - - - -0.64 - - - - - - - - - 2.01
AT1G67265 (DVL3)
1.55 5.49 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.57 5.34 - - - - - - - - - -1.47 - -2.21 - - - - - - - - - -1.74 - - - - - - - - 0.06 0.29 - - - -1.02 - - - - - - - - - -0.1
- 4.02 - -3.82 -2.55 -4.09 - - - - - - - -1.52 - 0.5 -1.18 -4.42 - -8.91 -11.81 -9.08 -0.58 -1.96 - -0.38 -2.33 2.25 -1.76 -2.13 1.29 -7.76 - -0.64 -0.13 -0.31 0.93 -1.01 -1.03 - - -14.77 -7.78 - 3.81 - - -1.49
-3.54 4.18 -0.58 - 0.39 -0.14 - - - -3.24 - -5.67 -2.06 - - -0.95 -2.97 -3.22 -3.84 -0.6 0.75 0.16 0.46 1.1 -0.39 -0.44 0.84 - - -0.41 0.74 -0.5 -0.22 1.45 -0.17 -0.57 -0.62 -0.83 -3.92 - - - - - -0.81 - -3.58 2.4
0.63 3.63 -2.11 1.3 -0.53 -0.54 0.81 -1.58 -2.17 -2.41 0.44 -0.26 0.2 0.63 - -0.13 - -2.52 -1.53 -1.09 -1.19 - - -0.04 -2.47 -0.54 0.0 -1.95 1.7 -1.58 -0.7 -1.39 -1.26 1.54 -2.19 - - 0.63 0.32 - 1.81 -1.07 -2.0 - - 0.36 - -0.53
2.25 2.42 0.71 - 1.52 1.65 - 0.25 - -0.79 - -5.78 -2.79 1.52 -2.59 -0.31 -0.63 -0.24 -0.74 -0.5 -0.42 -0.5 -0.11 0.36 -2.45 0.0 -0.5 - -3.69 -1.95 0.4 0.02 0.35 1.44 -0.09 0.15 -0.61 0.92 -1.03 -3.57 -5.07 -1.44 -1.08 -0.32 -1.57 - -5.28 1.2
0.08 4.94 - - - - - - - - - -4.25 - 0.54 - - - - - - - - - -1.01 - - - - - - - - 0.36 1.48 - - - 0.76 -0.77 - - - - - - - - 2.98
-0.94 2.85 -1.65 -1.6 -3.85 -3.72 -2.36 - -2.6 - - - - 0.82 -1.17 -0.41 0.65 0.6 -1.89 0.4 -0.03 -0.61 0.09 -0.07 - -0.42 -1.31 - -1.53 -4.99 0.59 0.97 0.92 1.92 1.43 - -3.42 0.37 -1.53 - - 1.34 1.07 0.43 1.3 0.18 - 1.65
2.86 3.93 - - - 0.99 - - - - - - - 1.49 3.03 - - - - - - - - -2.82 - - - - 1.38 - - - 0.95 0.86 - - - -0.03 -3.02 - - - - - - - - 2.29
3.45 4.67 - - - - - - - - - -3.37 - 0.57 - - - - - - - - - -0.89 - - - - - - - - -0.9 1.93 - - - 1.99 - - - - - - - - - 0.15
-0.23 3.98 1.11 - -0.89 -0.48 - -2.97 - -3.77 - -1.77 - 2.21 0.97 0.48 - - -2.37 -0.99 -1.78 -0.72 -0.86 -0.11 -2.84 -1.9 - - -1.14 -3.23 -1.41 -1.93 0.74 1.99 -1.05 0.16 -1.45 1.07 -1.73 - - - -0.77 0.57 - - -4.22 1.41
3.66 5.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.63 - - - - - - - - - -
AT2G21650 (MEE3)
-0.58 4.22 -5.12 -4.47 -4.75 -4.9 -3.78 -6.01 -0.82 -3.54 -0.22 -6.32 1.2 0.56 2.14 -3.14 -6.55 -6.79 -3.0 2.92 -2.78 -4.98 - -1.24 - -2.86 -6.35 2.52 -4.99 -8.33 1.54 -2.0 -1.57 -8.71 -0.87 -3.89 -6.36 -3.53 -2.64 - - - - -4.8 -6.38 - - -7.48
-1.91 3.46 - - - 1.46 2.59 0.03 - - - -4.72 - 1.57 - -0.96 - - - -1.64 - -0.15 1.35 -1.42 - - - - 0.02 - -2.16 -0.91 0.02 2.38 -0.13 - - 0.42 -3.02 - 0.46 - - 1.95 0.38 - - 1.25
- 3.06 - - - - 2.36 1.8 - - - - 3.2 - - - - - - 3.1 - - - - - - - - 3.2 - -0.14 - - 1.67 - - - - - - - - - - - - - -
- 5.43 - - - - - - - - - 2.29 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.07 5.36 - - - - - - - - - - - 0.63 - - - - - - - - - -1.26 - - - - - - - - - - - - - -0.65 - - - - - - - - - -
1.59 1.1 0.33 0.91 0.8 1.77 1.55 -1.67 -3.3 -4.29 -2.94 0.5 -1.01 0.25 0.66 -0.24 -0.51 -0.3 -2.5 0.02 -0.54 0.14 0.23 -0.27 -1.54 -0.1 -0.35 -0.88 0.53 -1.72 -0.16 -0.47 -0.13 -0.57 -0.25 0.54 0.51 -0.43 -0.23 -1.67 -0.44 -1.0 -0.39 -0.74 -0.02 0.81 -7.29 -1.1
-0.01 5.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.07 - - - - - - - - - - 2.4 - - - - - - 0.15 - - - - - - - - 2.45 - 0.47 - 0.24 - - - - - - - - - - - - - - -
- 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.2 - - - - 2.86 - - - - - - 2.31 - - - - - -0.22 - 1.87 - -1.37 - - 1.69 - - - 1.95 - -0.24 - - - 1.93 -1.2 -2.07 - - - - - - - - -
1.9 4.11 -0.14 - 1.4 2.24 - 0.34 - - - - - 1.25 3.28 - - - - - - - - -0.99 - - - - 0.18 - - - -1.68 0.6 - - - -0.93 -4.59 - - - - - - - - 0.38
AT3G51380 (IQD20)
-3.69 2.37 -3.39 -3.73 - -5.26 - -4.29 -3.3 -4.04 -3.82 - -2.47 0.47 0.2 -0.8 1.4 1.02 -1.95 0.81 0.28 -1.14 -0.48 -1.08 - -1.36 - 1.04 -4.56 -6.52 0.69 0.3 -1.05 0.4 -0.06 1.36 - -0.3 -3.96 - - 3.2 0.86 - -0.78 2.63 - -3.05
- -0.01 3.12 -0.52 2.42 -0.5 - - - - - - - 1.3 -0.54 -2.63 - - -2.38 2.39 - 1.82 2.81 -3.61 - -2.08 - - - -2.41 - - -0.9 - 0.79 -1.6 - 0.67 -5.37 - 2.92 - - - - - - -
4.15 4.59 - - - - - - - - - - - - - - - - - - - - - -0.51 - - - - - - - - -0.02 1.07 - - - -0.51 - - - - - - - - - 0.74
0.38 4.28 - - -1.65 - - - - - - - - 1.66 2.47 - - - - - - - - -0.49 - - - - -0.13 - - - -0.52 1.64 - - - -0.07 -2.9 - - - - - - - - 3.55
-0.34 3.19 1.26 -1.5 1.45 0.13 0.54 - -1.92 - - - - 2.12 1.06 -0.08 -1.79 - - 0.71 - 0.6 1.03 0.43 - 0.22 - -1.47 - -2.41 0.37 -1.72 0.5 0.12 -0.04 -0.01 -0.61 0.64 -0.81 - - 0.41 -0.53 -0.92 - - -0.76 0.9
-0.04 5.0 - - - - - - - - - - 3.5 1.94 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.28 2.84 1.1 - - - - -2.78 - -2.2 - - -2.96 - 4.59 - - - - -0.7 3.73 - - -6.78 - - - - - - - - -4.1 -4.33 - - - -6.72 - - - - - - - - - -
-0.74 3.49 2.17 1.49 2.0 1.37 1.19 - -3.75 - - - - 1.42 - -1.8 -3.46 -2.77 -2.16 0.02 -2.74 -1.68 -0.19 -1.33 -3.79 -2.01 - -0.46 -1.37 -2.0 -0.71 -2.61 -1.32 -0.17 -0.39 - -0.82 0.28 -3.17 -3.34 - -1.38 0.7 -0.39 -2.29 -0.37 0.59 0.96
1.65 2.51 0.51 -4.01 1.71 1.62 -3.42 -0.75 -6.71 -3.01 - -2.18 -2.46 -0.04 0.29 -0.68 -1.21 -2.15 -1.44 0.62 -1.18 -0.67 -0.3 -1.65 -2.89 -1.36 -2.35 -0.73 -0.92 -2.22 -0.5 -0.24 -0.97 0.08 -1.72 0.02 -0.06 -0.39 0.09 -0.52 0.2 2.01 1.34 -0.14 1.06 - - 0.88
0.15 3.8 2.25 1.7 - 2.4 2.61 - 1.36 - - -2.4 - 1.92 - - - - - - - - - -1.2 - - - - - - - - -0.11 - - - - -1.48 -0.61 - - - - - - - - 2.22
-1.5 5.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.27 5.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.71 - - - - - - - - - -
-0.71 2.44 0.54 2.28 -0.21 -1.2 2.1 - - - -3.89 - - 0.73 0.47 0.26 -0.98 -1.2 -1.61 0.76 -0.77 0.39 0.61 -0.04 -4.11 -0.36 -2.45 -1.92 0.74 -4.03 0.74 -0.95 -0.14 -0.05 0.8 -0.26 -0.64 0.09 -0.68 -3.73 - -0.39 -0.19 1.15 -0.36 - - 0.77
1.9 4.95 - - - - - - - - - -3.38 - 0.38 - - - - - - - - - -1.14 - - - - - - - - 0.59 2.34 - - - 0.0 - - - - - - - - - 2.01
1.49 4.23 -1.42 - 1.93 1.73 - -0.9 - 0.35 - -5.18 - 0.6 - -2.39 -0.45 - - -2.49 - 0.12 -0.3 -0.63 - -2.49 -1.25 - -2.72 - -2.22 -2.3 -0.61 1.11 -2.58 0.21 -1.26 0.23 -0.2 - - 0.62 - - -0.28 - -2.53 0.73
2.52 5.4 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.13 2.52 0.04 1.58 0.84 -2.52 0.18 - -0.65 -0.17 -1.61 -2.54 -0.42 2.05 - -0.28 -2.24 -0.87 -0.11 -0.18 0.02 -1.48 -0.42 -0.15 -0.1 -0.67 -2.17 - -0.96 0.98 0.29 0.56 -0.48 1.18 1.07 -0.04 -0.53 0.16 0.3 - - - -0.39 0.95 0.37 - - 0.38
0.2 2.0 0.16 -0.05 0.58 -0.17 0.46 -0.95 -1.52 -1.65 -1.12 1.27 -1.12 0.47 - -0.53 -0.56 0.03 -1.39 0.87 -0.25 0.15 0.2 -0.49 -2.29 -0.78 -0.7 1.24 -1.49 -1.59 0.73 -1.09 -1.25 -0.9 0.87 -0.91 -1.12 0.47 -1.52 - -4.86 -1.23 0.7 1.31 -0.17 1.36 -0.76 0.98
2.07 4.38 - - - - - - - - - -4.23 - 2.72 - - - - - - - - - -0.88 - - - - 3.13 - - - - 1.54 - - - 0.63 -2.57 - - - - - - - - 1.34
0.92 3.82 - 2.72 - 1.5 0.43 - - - - 2.9 - 2.41 - - - - - - - - - -2.8 - - - - - - - - - 2.16 -2.0 - - -1.03 -0.98 - - - - - - - - 1.34
AT5G22940 (F8H)
-1.64 1.9 -4.79 - -6.07 -3.32 -6.36 0.84 0.37 0.71 0.26 -6.0 -0.37 -0.42 -0.12 -1.49 1.46 1.65 0.08 1.15 -2.15 -1.27 -0.35 0.04 -7.39 -0.67 -5.3 1.0 -2.32 -9.89 1.25 -0.66 -0.95 0.14 -0.66 -0.95 -9.96 -0.92 -3.51 - - 0.19 1.7 -0.16 0.64 2.64 - 0.13
- 3.64 - - - - - -3.11 - -3.09 -2.61 - - -1.72 4.67 - - - -3.43 0.54 2.72 - - -4.85 - - -2.44 - - - -0.74 - - - - - - -1.37 - - - - - - - - - -
2.48 5.14 - - - - - - - - - -3.54 - 0.14 - - - - - - - - - -1.86 - - - - - - - - 0.21 1.8 - - - -1.1 - - - - - - - - - -0.61
0.19 2.81 3.65 - 1.83 - - - - - - 1.98 - 2.78 - - - - - -1.22 - - - -3.21 - - - 2.41 - - - - - 1.16 - - - -2.33 - - - - - - - - - 2.2
0.65 2.6 1.52 1.46 1.78 -0.48 1.75 - -3.22 -4.23 -2.98 - - 0.37 - -1.93 -0.71 -1.76 -1.97 -0.06 0.33 -1.06 0.18 -0.43 -0.18 -1.15 -0.82 -2.77 -2.15 -0.85 0.73 0.44 0.79 1.94 -0.5 -0.3 - 0.29 -0.21 - - -0.89 -0.48 -0.63 - - 0.26 0.62
- 2.7 0.11 - 0.36 0.43 - -1.44 - - - - - 2.03 - 0.12 0.24 -0.06 -3.13 1.82 1.49 0.76 1.65 -0.09 -1.45 -0.7 - 1.25 0.38 - 1.42 -0.57 1.07 -3.26 -0.13 1.99 - -0.02 -0.17 - - - -1.12 - - - - -1.19
- 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.88 3.3 1.68 - 2.02 1.7 - -1.97 - - - -5.37 - 2.24 - - - - - - - - - -0.41 - - - - -0.35 - - - 0.99 2.75 - - - 1.56 -1.3 - - - - 0.25 - - - 2.58
3.53 5.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.21 3.07 1.16 0.41 -1.28 0.93 1.94 -1.33 -2.29 - - - -1.65 1.52 1.11 0.29 - - -1.71 -0.41 0.24 0.71 -0.36 -0.5 - -1.23 - -1.84 1.86 - -0.62 0.03 -1.41 -0.75 -0.38 -0.95 - -0.16 -0.02 1.41 - - 0.43 -1.28 - - - -1.05
0.04 5.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.49 3.41 0.72 1.18 1.27 0.89 0.62 -1.01 -1.14 -2.52 -1.49 -4.45 -2.96 0.06 1.78 -3.77 -2.95 -4.21 -4.69 -0.57 -0.93 -1.92 -2.68 -1.33 -3.08 -2.39 - -3.63 0.45 -2.98 -1.73 -3.1 -0.78 0.3 -2.44 -1.74 -1.28 -0.38 -2.43 - -2.32 -1.75 -0.09 0.51 -3.66 -0.32 0.97 0.9
AT5G58890 (AGL82)
- 2.06 - 1.32 2.23 3.85 - 2.39 0.95 - - - 2.06 - - - - - -0.3 3.25 - - - - - - - - - - - - - -0.93 - - - - - - - - - - - - - -
0.86 4.89 - - - - - - - - - - - 3.16 - - - - - -1.75 - - - - - - - - -0.31 - - - - 2.17 -1.79 - - -1.3 -1.32 - - - - - - - - -0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.