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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.18 | - | - | - | - | 3.53 | 1.08 | 0.62 | 1.67 | -1.04 | 1.5 | 0.33 | 3.4 | 1.97 | 2.0 | 3.01 | - | - | - | - | - | - | - | - | - | - | - | - | -0.35 | 0.28 | 0.01 | 0.67 | 0.75 | - | - | - | - | - | - | - | - | - | |
| -3.33 | -1.56 | - | - | - | - | - | -3.62 | -2.2 | -4.69 | - | -6.97 | -5.93 | - | -7.37 | -5.42 | - | - | -5.93 | 2.78 | 0.71 | 1.44 | 1.35 | -0.05 | 1.84 | -0.38 | 2.78 | 2.54 | 1.71 | 2.54 | -1.22 | -1.74 | -1.49 | -1.81 | -1.53 | -2.18 | -2.13 | -1.77 | -1.94 | -2.63 | -1.96 | -2.36 | 0.86 | 0.47 | 0.75 | 0.51 | 2.16 | -6.89 | -8.2 | -7.18 | -4.59 | -4.11 | - | - | -3.9 | -7.59 | |
| -2.74 | -1.37 | - | -5.0 | - | - | - | -2.88 | -0.65 | -5.42 | - | -6.63 | -6.6 | - | -4.71 | - | - | -5.99 | -7.04 | 3.05 | 1.1 | 1.4 | 1.92 | -0.61 | 1.18 | -0.34 | 3.29 | 2.21 | 1.27 | 2.46 | -3.54 | -2.87 | -2.13 | -3.86 | -2.64 | -3.83 | - | -3.36 | -3.73 | -4.19 | -2.99 | -4.89 | 0.36 | -0.28 | 1.3 | 0.65 | 2.1 | - | - | - | -5.22 | -4.93 | - | -7.0 | -3.45 | - | |
| - | - | - | - | - | - | 0.37 | - | - | - | - | - | - | - | - | - | - | - | - | 3.26 | - | -2.0 | - | - | - | -0.39 | 3.64 | 2.85 | 0.63 | 3.22 | 0.1 | 0.6 | 0.67 | - | 0.67 | 0.92 | 0.54 | -0.42 | 0.56 | -0.8 | -2.58 | 0.15 | - | - | - | - | -1.86 | -5.5 | -2.88 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.