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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.79 | 0.92 | -3.11 | -2.24 | -5.41 | - | - | -3.37 | 0.86 | 0.42 | - | -2.94 | -3.21 | -7.63 | -3.27 | -3.43 | - | - | 0.71 | 0.31 | 0.53 | 1.16 | -0.06 | 1.04 | -0.1 | 0.78 | 0.56 | 0.46 | -0.14 | 0.38 | 0.65 | 0.61 | 0.93 | 1.11 | 0.83 | 0.29 | 0.53 | 0.7 | 0.37 | 0.79 | 0.45 | 0.26 | -0.53 | 0.17 | -1.34 | -0.02 | 1.56 | 0.27 | 0.31 | -1.0 | -1.74 | 0.0 | -1.12 | -1.71 | 0.77 | -0.94 | |
| -0.92 | 1.53 | - | -4.08 | -5.85 | -7.86 | - | -3.54 | 1.66 | -0.05 | - | -4.75 | -4.34 | -5.44 | -5.56 | - | - | - | 0.62 | -0.18 | -0.73 | 0.96 | -1.37 | 1.86 | -0.42 | 0.84 | 0.1 | 0.07 | 0.06 | 0.01 | 0.93 | 0.85 | 1.23 | 1.54 | 1.13 | 0.69 | 0.68 | 1.16 | 0.54 | 0.81 | 0.91 | 0.66 | -1.69 | -1.05 | -2.8 | -0.66 | 1.11 | 0.04 | -0.19 | -0.85 | -2.6 | -1.1 | -1.46 | -1.55 | 0.17 | -0.85 | |
| -0.06 | 2.22 | - | -6.81 | - | - | - | -6.15 | 1.22 | -0.04 | - | -6.06 | - | - | - | - | - | - | 0.32 | 0.66 | -0.25 | 1.86 | -0.65 | 2.42 | 1.23 | 0.66 | 0.54 | 0.88 | 0.77 | 0.86 | 0.47 | 0.71 | 0.46 | 0.84 | 0.48 | 0.21 | 0.15 | 0.28 | 0.1 | 0.32 | 0.03 | -0.0 | -5.62 | -2.87 | -4.95 | -0.36 | 1.14 | -0.14 | -0.19 | -1.09 | -2.85 | -2.1 | -1.39 | -1.71 | -0.72 | -0.87 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.