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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3.68 | 0.0 | - | - | - | - | - | - | 0.36 | 1.18 | - | -4.77 | -4.83 | -5.4 | -3.22 | - | - | - | 1.69 | -3.43 | 0.04 | -5.02 | -2.96 | - | - | -6.76 | - | - | - | - | -0.61 | 0.21 | 0.94 | 0.63 | -0.17 | -0.08 | 0.29 | 0.56 | -1.96 | 1.48 | 0.01 | 0.31 | - | -5.0 | -5.02 | -2.42 | -2.88 | 0.88 | 0.89 | 3.41 | -2.46 | -3.06 | 0.88 | 0.81 | -3.32 | -3.35 | |
| 4.64 | -4.33 | - | - | - | - | - | - | -0.75 | -5.19 | - | - | - | - | - | - | - | - | -7.41 | - | - | - | - | -2.67 | - | -4.0 | - | - | - | - | -4.06 | -3.93 | -2.41 | -3.05 | -2.71 | -2.88 | -4.2 | -1.8 | -2.87 | -1.0 | -1.97 | -5.1 | - | - | - | -5.0 | - | -1.9 | -5.12 | 3.02 | 0.11 | -0.94 | 2.06 | 3.72 | -1.56 | -1.21 | |
| 4.61 | -0.09 | - | - | - | - | - | -3.84 | -1.5 | -0.17 | - | -4.74 | - | - | - | - | - | - | 0.51 | -3.12 | 0.7 | -2.36 | -2.89 | - | -2.06 | -4.88 | - | - | -4.14 | - | - | -4.92 | - | -2.54 | - | -3.64 | - | -3.75 | -5.15 | -3.9 | -2.24 | -3.62 | -6.06 | - | -4.94 | -1.49 | - | -1.21 | -1.41 | 3.99 | -1.03 | -3.39 | 1.55 | 1.97 | -4.85 | -2.63 | |
| 4.39 | - | - | - | - | - | - | -0.38 | -2.65 | -0.03 | - | - | - | - | - | - | - | - | -1.53 | - | 0.52 | 0.47 | - | - | - | -1.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.93 | 3.88 | - | - | 0.89 | -2.11 | - | 1.2 | 3.16 | -0.04 | - | |
| 3.44 | -3.32 | -5.36 | -1.2 | -7.64 | -6.8 | - | 0.12 | 0.47 | 0.46 | -3.66 | -1.92 | -1.83 | -3.28 | -0.58 | - | - | - | 0.15 | -6.25 | 2.15 | -5.66 | 0.34 | -8.4 | - | -2.76 | -6.29 | -8.4 | - | -9.44 | -7.14 | -8.02 | -6.07 | -7.27 | -9.08 | -6.68 | - | -6.57 | -10.53 | -6.7 | -8.12 | -6.94 | 1.06 | 0.92 | 0.54 | 1.31 | -2.54 | -1.66 | -1.96 | 2.68 | 0.26 | -1.74 | 1.67 | 3.46 | -0.01 | -1.02 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.