View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.47 | - | - | - | -1.12 | - | -0.23 | -1.15 | 2.85 | - | -0.15 | - | 1.52 | - | - | - | - | 1.39 | 2.4 | - | 0.64 | - | - | 1.5 | -0.39 | - | 2.14 | - | 1.52 | 0.62 | - | - | -0.33 | 0.88 | -0.18 | -0.35 | - | 1.78 | -0.7 | 1.01 | - | - | - | 0.59 | 0.81 | 0.76 | -1.81 | -1.92 | - | - | - | -0.34 | - | -0.24 | 0.15 | |
0.23 | - | - | - | - | - | - | - | -1.31 | 3.29 | - | -0.49 | - | -0.18 | -0.92 | - | - | - | 1.87 | 0.74 | 0.33 | 1.3 | - | 1.21 | - | -0.46 | - | 2.53 | 0.08 | 1.75 | -1.38 | - | - | - | 1.5 | 0.3 | - | -0.03 | -0.49 | - | - | -0.78 | 0.49 | 0.17 | 2.65 | -0.75 | - | -0.76 | -3.3 | - | -0.6 | - | 0.17 | - | - | 0.74 | |
-0.6 | 1.29 | 0.09 | - | -2.05 | -2.3 | - | -0.93 | -2.09 | 2.73 | - | 1.0 | - | 1.53 | -2.72 | - | - | - | 0.88 | 2.56 | -0.5 | 1.64 | - | -0.62 | 0.32 | -1.34 | 0.07 | 1.19 | 0.57 | 1.15 | -1.07 | 0.41 | 0.08 | -0.19 | 0.27 | -0.97 | 1.22 | -1.86 | 0.19 | 0.99 | -0.79 | -0.51 | -0.87 | -0.66 | 0.81 | -1.47 | -1.42 | -3.17 | -2.38 | -2.71 | - | -2.54 | - | - | -2.42 | 0.19 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.