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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.07 | - | 1.74 | 2.26 | 1.59 | -2.25 | - | -1.33 | -0.33 | -1.22 | 1.21 | 0.02 | 0.79 | 1.19 | -0.88 | -2.28 | - | 0.85 | -0.95 | -0.53 | 0.03 | -0.7 | - | -0.51 | -2.14 | 1.31 | 0.34 | -0.5 | 0.1 | 1.33 | -1.13 | -0.3 | -0.42 | -0.83 | -0.49 | -0.7 | -1.05 | -2.2 | -0.56 | -1.1 | -0.35 | -2.08 | 0.09 | -0.59 | -0.14 | 0.44 | 0.92 | 0.33 | 0.53 | -0.91 | -0.47 | 0.14 | -0.31 | -0.35 | -0.12 | -0.21 | |
| -1.8 | - | 3.73 | 3.17 | 2.08 | -0.5 | 1.74 | 2.22 | -1.46 | -0.19 | - | 1.17 | 1.53 | -0.03 | 2.54 | - | - | - | 1.1 | - | -1.7 | -1.72 | - | - | - | 0.75 | - | - | - | - | -1.27 | -2.7 | -2.78 | - | - | - | -2.95 | - | - | -2.44 | - | - | - | - | - | -1.67 | -1.62 | -1.18 | -0.42 | - | - | - | - | - | - | - | |
| - | - | 3.43 | 2.58 | 2.13 | 0.04 | 1.1 | -1.52 | 1.45 | -7.98 | -0.0 | 0.17 | 1.72 | 1.86 | -0.05 | 1.57 | - | 2.17 | -2.28 | - | - | - | - | - | -7.21 | 0.36 | - | - | - | - | -1.94 | - | -1.06 | -2.01 | -1.92 | - | -1.71 | -4.97 | -2.03 | -0.39 | -1.45 | -0.26 | -0.87 | -2.68 | -1.12 | - | - | -0.01 | 0.82 | - | -1.32 | -1.46 | -3.28 | -2.37 | -0.27 | -4.45 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.