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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.83 | -0.86 | -2.81 | -0.67 | -0.84 | -3.06 | -0.93 | -1.97 | -0.14 | -1.67 | -3.98 | -2.65 | -4.6 | -1.61 | -1.98 | -0.55 | - | -1.68 | -2.15 | 0.95 | 0.03 | 0.07 | -0.65 | -0.36 | 0.56 | 1.22 | 1.03 | 1.1 | 0.57 | 0.66 | 0.76 | 0.65 | 0.64 | 0.66 | 0.62 | 0.55 | 0.96 | 0.15 | 0.42 | -0.11 | 0.64 | 0.57 | -0.23 | -0.92 | -0.75 | -0.86 | 0.55 | 0.31 | 0.87 | 0.09 | 0.27 | 0.57 | 0.13 | 0.29 | 0.24 | -0.29 | |
| -0.87 | -1.56 | -2.88 | -2.25 | -3.4 | -3.27 | - | -1.38 | -0.02 | -1.16 | -2.6 | -4.3 | -1.0 | -1.85 | -2.33 | -1.42 | - | -1.91 | -0.58 | 0.88 | -0.01 | -0.19 | -0.2 | 0.36 | 0.8 | 0.95 | 1.12 | 0.93 | 0.84 | 1.08 | 0.76 | 0.89 | 0.54 | 0.66 | 0.23 | 0.57 | 1.05 | 0.02 | 0.39 | -0.2 | 0.5 | 0.37 | -0.53 | -0.47 | 0.6 | -1.31 | 0.38 | 0.27 | 0.46 | -0.23 | 0.17 | 0.75 | 0.19 | 0.33 | 0.73 | -0.86 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.