Heatmap: Cluster_136 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00001p00110790 (evm_27.TU.AmTr_v1.0_scaffold00001.78)	0.13	0.47	0.11	0.1	0.25	0.04	0.38	0.1	0.41	0.43	0.46	0.45	0.56	0.86	0.52	1.0	0.37	0.6	0.77	0.5	0.41	0.41
AMTR_s00001p00195910 (evm_27.TU.AmTr_v1.0_scaffold00001.196)	0.04	0.02	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.03	0.06	0.17	0.27	0.02	1.0	0.02	0.01	0.01	0.0	0.01	0.1
AMTR_s00002p00254130 (evm_27.TU.AmTr_v1.0_scaffold00002.381)	0.03	0.0	0.0	0.04	0.06	0.0	0.0	0.0	0.0	0.0	0.05	0.03	0.25	0.24	0.66	1.0	0.04	0.05	0.11	0.07	0.07	0.42
AMTR_s00006p00255390 (evm_27.TU.AmTr_v1.0_scaffold00006.186)	0.01	0.0	0.01	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.12	0.1	0.19	0.23	0.08	1.0	0.09	0.14	0.12	0.06	0.16	0.32
AMTR_s00007p00269150 (evm_27.TU.AmTr_v1.0_scaffold00007.401)	0.0	0.01	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.03	0.08	0.14	0.64	0.1	1.0	0.0	0.0	0.01	0.0	0.0	0.0
AMTR_s00008p00208550 (evm_27.TU.AmTr_v1.0_scaffold00008.128)	0.16	0.23	0.64	0.0	0.12	0.01	0.0	0.0	0.01	0.0	0.03	0.1	0.24	1.0	0.21	0.52	0.02	0.02	0.03	0.02	0.0	0.11
AMTR_s00010p00250360 (evm_27.TU.AmTr_v1.0_scaffold00010.352)	0.03	0.01	0.04	0.03	0.04	0.05	0.06	0.0	0.04	0.04	0.18	0.12	0.16	0.28	0.04	1.0	0.06	0.09	0.11	0.03	0.05	0.14
AMTR_s00010p00250450 (evm_27.TU.AmTr_v1.0_scaffold00010.353)	0.01	0.29	0.0	0.01	0.08	0.0	0.01	0.0	0.01	0.01	0.16	0.21	0.19	0.2	0.05	1.0	0.08	0.07	0.05	0.01	0.01	0.17
AMTR_s00010p00251810 (evm_27.TU.AmTr_v1.0_scaffold00010.362)	0.0	0.0	0.05	0.01	0.02	0.0	0.0	0.0	0.0	0.0	0.15	0.07	0.52	0.54	0.68	1.0	0.08	0.05	0.06	0.19	0.06	0.06
AMTR_s00010p00252100 (evm_27.TU.AmTr_v1.0_scaffold00010.364)	0.0	0.0	0.0	0.0	0.1	0.0	0.0	0.0	0.0	0.0	0.01	0.04	0.08	0.29	0.43	1.0	0.0	0.02	0.03	0.26	0.04	0.0
AMTR_s00010p00264600 (evm_27.TU.AmTr_v1.0_scaffold00010.503)	0.11	0.13	0.28	0.24	0.12	0.0	0.03	0.01	0.01	0.02	0.61	0.83	0.34	0.14	0.16	1.0	0.25	0.08	0.06	0.16	0.03	0.15
AMTR_s00010p00266320 (evm_27.TU.AmTr_v1.0_scaffold00010.523)	0.0	0.0	0.23	0.36	0.26	0.0	0.0	0.0	0.0	0.0	0.1	0.23	0.36	0.39	0.62	1.0	0.01	0.08	0.22	0.06	0.08	0.21
AMTR_s00011p00205190 (evm_27.TU.AmTr_v1.0_scaffold00011.74)	0.11	0.37	0.27	0.03	0.12	0.06	0.4	0.06	0.29	0.24	0.29	0.32	0.4	0.53	0.14	1.0	0.2	0.34	0.28	0.3	0.3	0.32
AMTR_s00016p00102330 (evm_27.TU.AmTr_v1.0_scaffold00016.63)	0.0	0.0	0.0	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.33	0.28	0.47	1.0	0.14	0.0	0.23	0.2	0.02	0.13	0.4	0.03
AMTR_s00016p00138470 (evm_27.TU.AmTr_v1.0_scaffold00016.96)	0.15	0.11	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.43	0.29	0.18	0.04	0.04	1.0	0.21	0.06	0.05	0.01	0.0	0.0
AMTR_s00016p00250350 (evm_27.TU.AmTr_v1.0_scaffold00016.298)	0.3	0.39	0.2	0.05	0.03	0.0	0.0	0.0	0.01	0.01	0.35	0.36	0.36	0.14	0.1	1.0	0.27	0.07	0.06	0.05	0.0	0.18
AMTR_s00018p00139030 (evm_27.TU.AmTr_v1.0_scaffold00018.63)	0.09	0.0	0.0	0.02	0.05	0.0	0.0	0.0	0.0	0.0	0.13	0.13	0.18	0.66	0.11	1.0	0.02	0.0	0.01	0.0	0.04	0.26
AMTR_s00022p00243980 (evm_27.TU.AmTr_v1.0_scaffold00022.356)	0.0	0.0	0.0	0.0	0.04	0.0	0.0	0.0	0.0	0.0	0.98	0.66	0.4	0.08	0.54	1.0	0.13	0.04	0.07	0.04	0.02	0.08
AMTR_s00025p00237150 (evm_27.TU.AmTr_v1.0_scaffold00025.354)	0.15	0.2	0.0	0.01	0.23	0.0	0.19	0.0	0.15	0.12	0.27	0.32	0.33	0.66	0.26	1.0	0.34	0.27	0.27	0.28	0.35	0.25
AMTR_s00026p00199790 (evm_27.TU.AmTr_v1.0_scaffold00026.101)	0.0	0.3	0.0	0.0	0.28	0.0	0.0	0.0	0.01	0.03	0.27	0.75	0.41	0.85	0.4	1.0	0.09	0.27	0.1	0.02	0.07	0.38
AMTR_s00026p00244220 (evm_27.TU.AmTr_v1.0_scaffold00026.137)	0.0	0.02	0.25	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.46	0.5	0.27	0.59	0.1	1.0	0.25	0.0	0.0	0.0	0.0	0.47
AMTR_s00032p00214310 (evm_27.TU.AmTr_v1.0_scaffold00032.209)	0.0	0.0	0.0	0.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.06	0.36	0.01	1.0	0.0	0.0	0.0	0.03	0.0	0.11
AMTR_s00038p00221410 (evm_27.TU.AmTr_v1.0_scaffold00038.193)	0.0	0.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.02	0.0	0.21	0.31	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.14
AMTR_s00041p00064960 (evm_27.TU.AmTr_v1.0_scaffold00041.36)	0.29	0.09	0.5	0.04	0.33	0.0	0.01	0.0	0.02	0.01	0.26	0.34	0.51	1.0	0.26	0.28	0.07	0.09	0.16	0.24	0.13	0.29
AMTR_s00044p00191980 (evm_27.TU.AmTr_v1.0_scaffold00044.210)	0.04	0.02	0.02	0.01	0.0	0.01	0.0	0.0	0.0	0.0	0.01	0.01	0.11	0.32	0.06	1.0	0.0	0.0	0.0	0.0	0.0	0.01
AMTR_s00044p00196850 (evm_27.TU.AmTr_v1.0_scaffold00044.214)	0.27	0.27	0.17	0.05	0.21	0.0	0.01	0.0	0.01	0.01	0.26	0.14	0.19	1.0	0.53	0.82	0.1	0.08	0.15	0.03	0.07	0.06
AMTR_s00048p00125480 (evm_27.TU.AmTr_v1.0_scaffold00048.68)	0.18	0.11	0.04	0.0	0.04	0.0	0.0	0.0	0.0	0.0	0.34	0.28	0.4	0.22	0.08	1.0	0.08	0.08	0.07	0.06	0.05	0.1
AMTR_s00049p00082840 (evm_27.TU.AmTr_v1.0_scaffold00049.52)	0.64	0.56	0.4	0.05	0.08	0.01	0.01	0.05	0.02	0.02	0.49	0.52	0.22	0.02	0.08	1.0	0.6	0.33	0.2	0.12	0.06	0.17
AMTR_s00049p00187420 (evm_27.TU.AmTr_v1.0_scaffold00049.191)	0.0	0.0	0.0	0.03	0.06	0.0	0.03	0.0	0.03	0.01	0.13	0.11	0.44	1.0	0.38	0.84	0.01	0.01	0.04	0.01	0.01	0.11
AMTR_s00049p00188370 (evm_27.TU.AmTr_v1.0_scaffold00049.191)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.14	0.1	0.26	0.7	0.37	1.0	0.0	0.0	0.01	0.0	0.0	0.03
AMTR_s00051p00057470 (evm_27.TU.AmTr_v1.0_scaffold00051.21)	0.34	0.16	0.13	0.0	0.15	0.02	0.1	0.0	0.09	0.08	0.42	0.5	0.31	1.0	0.26	0.18	0.23	0.21	0.12	0.04	0.07	0.1
AMTR_s00051p00057510 (evm_27.TU.AmTr_v1.0_scaffold00051.22)	0.52	0.43	0.31	0.12	0.2	0.05	0.11	0.0	0.08	0.09	0.41	0.6	0.35	1.0	0.29	0.2	0.06	0.19	0.16	0.03	0.05	0.11
AMTR_s00059p00157160 (evm_27.TU.AmTr_v1.0_scaffold00059.144)	0.12	0.14	0.15	0.03	0.1	0.0	0.0	0.0	0.0	0.0	0.17	0.29	0.04	1.0	0.36	0.67	0.07	0.12	0.17	0.0	0.0	0.01
AMTR_s00061p00164140 (evm_27.TU.AmTr_v1.0_scaffold00061.163)	0.22	0.09	0.06	0.11	0.22	0.01	0.03	0.02	0.03	0.04	0.47	0.36	0.46	0.57	0.31	1.0	0.14	0.15	0.34	0.17	0.11	0.17
AMTR_s00065p00131880 (evm_27.TU.AmTr_v1.0_scaffold00065.86)	0.01	0.03	0.05	0.05	0.12	0.18	0.13	0.06	0.07	0.1	0.03	0.02	0.21	1.0	0.38	0.36	0.05	0.03	0.03	0.03	0.0	0.06
AMTR_s00067p00112750 (evm_27.TU.AmTr_v1.0_scaffold00067.90)	0.05	0.07	0.06	0.05	0.02	0.0	0.0	0.0	0.03	0.01	0.32	0.09	0.13	0.04	0.03	1.0	0.01	0.03	0.02	0.01	0.01	0.02
AMTR_s00073p00098560 (evm_27.TU.AmTr_v1.0_scaffold00073.25)	0.0	0.0	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.04	0.93	0.14	1.0	0.0	0.0	0.0	0.0	0.03	0.0
AMTR_s00073p00098590 (evm_27.TU.AmTr_v1.0_scaffold00073.26)	0.0	0.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.04	1.0	0.16	0.84	0.0	0.01	0.0	0.0	0.0	0.0
AMTR_s00075p00034440 (evm_27.TU.AmTr_v1.0_scaffold00075.6)	0.0	0.0	0.0	0.0	0.06	0.0	0.0	0.0	0.01	0.0	0.17	0.3	0.41	0.04	0.13	1.0	0.07	0.26	0.0	0.0	0.0	0.12
AMTR_s00077p00129970 (evm_27.TU.AmTr_v1.0_scaffold00077.125)	0.01	0.04	0.02	0.03	0.08	0.0	0.0	0.0	0.0	0.0	0.1	0.09	0.27	0.41	0.17	1.0	0.01	0.03	0.01	0.02	0.0	0.05
AMTR_s00099p00074960 (evm_27.TU.AmTr_v1.0_scaffold00099.57)	0.07	0.03	0.0	0.0	0.06	0.0	0.13	0.01	0.25	0.22	0.18	0.2	0.26	0.48	0.2	1.0	0.16	0.4	0.41	0.41	0.37	0.15
AMTR_s00099p00088310 (evm_27.TU.AmTr_v1.0_scaffold00099.66)	0.59	0.3	0.75	0.37	0.23	0.01	0.1	0.0	0.14	0.11	0.41	0.26	0.38	0.74	0.3	0.7	0.34	0.17	0.26	0.2	0.16	1.0
AMTR_s00106p00151600 (evm_27.TU.AmTr_v1.0_scaffold00106.125)	0.02	0.01	0.01	0.02	0.14	0.0	0.0	0.0	0.0	0.0	0.01	0.02	0.22	1.0	0.37	0.08	0.01	0.01	0.02	0.11	0.01	0.13
AMTR_s00144p00030800 (evm_27.TU.AmTr_v1.0_scaffold00144.8)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.04	0.27	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00145p00032450 (evm_27.TU.AmTr_v1.0_scaffold00145.8)	0.0	0.0	0.0	0.0	0.02	0.0	0.02	0.0	0.01	0.01	0.32	0.09	0.2	0.18	0.18	1.0	0.01	0.03	0.08	0.02	0.02	0.07
AMTR_s00147p00088570 (evm_27.TU.AmTr_v1.0_scaffold00147.46)	0.1	0.08	0.07	0.0	0.03	0.0	0.0	0.0	0.0	0.0	0.58	0.13	0.34	0.38	0.1	1.0	0.02	0.03	0.04	0.03	0.02	0.08
AMTR_s00149p00058790 (evm_27.TU.AmTr_v1.0_scaffold00149.37)	0.01	0.03	0.0	0.14	0.05	0.08	0.01	0.01	0.01	0.01	0.58	0.52	0.31	0.59	0.19	0.74	0.15	0.2	0.16	0.05	0.2	1.0
AMTR_s00163p00053930 (evm_27.TU.AmTr_v1.0_scaffold00163.17)	0.12	0.03	0.15	0.04	0.14	0.01	0.03	0.02	0.02	0.03	0.14	0.47	0.54	0.67	0.18	1.0	0.08	0.05	0.02	0.0	0.01	0.11
AMTR_s00184p00038670 (evm_27.TU.AmTr_v1.0_scaffold00184.14)	0.25	0.35	0.08	0.2	0.19	0.0	0.0	0.0	0.0	0.01	0.27	0.47	0.37	1.0	0.15	0.43	0.07	0.09	0.12	0.13	0.0	0.49

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)