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Heatmap: Cluster_6 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00239100 (evm_27.TU.AmTr_v1.0_scaffold00001.269)
 - - - - 3.89 - - - 0.96 - - - - - - - - - - - - 2.38
AMTR_s00001p00271970 (evm_27.TU.AmTr_v1.0_scaffold00001.502)
 -0.67 -2.19 -0.17 -1.93 -0.58 - -9.99 -8.05 -9.24 - 1.59 2.46 0.44 -0.66 -0.67 -1.06 -0.18 0.67 0.33 0.8 -0.34 0.54
AMTR_s00001p00272150 (evm_27.TU.AmTr_v1.0_scaffold00001.505)
 1.25 2.46 - - -1.31 - - - -4.95 - 0.26 2.24 -0.76 -4.08 -5.43 -2.97 1.69 - 0.13 -3.14 - 1.33
AMTR_s00001p00272760 (evm_27.TU.AmTr_v1.0_scaffold00001.560)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00001p00273070 (evm_27.TU.AmTr_v1.0_scaffold00001.591)
 -0.64 -6.65 -0.41 -6.1 -3.66 - - - - -8.24 2.4 1.87 -1.49 -6.92 -3.6 -4.15 3.21 -2.2 - - - 0.68
AMTR_s00005p00239620 (evm_27.TU.AmTr_v1.0_scaffold00005.126)
 - - - - 3.89 - - - - - - - - - 2.85 - - - - - - -
AMTR_s00005p00246530 (evm_27.TU.AmTr_v1.0_scaffold00005.144)
 - - - - -4.26 - - - -6.56 - 1.98 0.73 -1.02 -4.47 -3.88 - 3.76 0.31 - -5.47 - -0.15
AMTR_s00005p00266150 (evm_27.TU.AmTr_v1.0_scaffold00005.228)
 -4.25 -0.79 2.03 -2.66 0.93 -1.5 -0.35 -1.79 -0.52 -1.14 -0.15 1.21 -2.2 -1.74 0.33 -4.61 1.23 1.63 0.63 -1.84 -2.08 -3.12
AMTR_s00006p00265720 (evm_27.TU.AmTr_v1.0_scaffold00006.280)
 - - - - -0.87 - - - -4.77 - -2.11 0.77 -1.58 - 0.18 - 1.87 2.16 2.52 -3.16 2.01 -20.44
AMTR_s00006p00266420 (evm_27.TU.AmTr_v1.0_scaffold00006.287)
 - - - - 1.46 - - - - - -0.12 - -0.89 -2.56 -2.34 1.19 1.7 3.15 1.59 - - -
AMTR_s00007p00253160 (evm_27.TU.AmTr_v1.0_scaffold00007.291)
 - - - - 0.13 - - - - -5.08 0.65 3.14 - -5.26 -2.8 - 1.12 2.74 -0.35 -4.62 -1.12 -2.41
AMTR_s00007p00253830 (evm_27.TU.AmTr_v1.0_scaffold00007.294)
 -0.21 -3.0 -1.61 - -2.81 -6.45 -5.81 -9.84 -6.32 -6.11 -0.24 -1.32 -0.01 -6.29 -4.28 -0.68 0.64 2.96 1.19 -0.11 1.99 0.04
AMTR_s00007p00269050 (evm_27.TU.AmTr_v1.0_scaffold00007.400)
 -7.86 -1.12 -3.51 -8.98 -2.39 -3.12 -5.37 -6.86 -8.76 -9.54 -1.1 -0.83 1.4 2.63 -0.07 2.74 1.4 -4.65 -1.37 -1.38 -3.8 -3.6
AMTR_s00008p00021210 (evm_27.TU.AmTr_v1.0_scaffold00008.7)
 - - - - -2.79 - - -7.09 -9.49 - 0.28 1.2 -0.25 -2.13 -2.23 -1.51 -0.81 2.95 1.73 -1.92 2.25 -4.35
AMTR_s00008p00116890 (evm_27.TU.AmTr_v1.0_scaffold00008.47)
 - - - - 3.53 - - - 2.65 -0.61 1.02 - -1.82 -1.75 -1.25 - - - - - - -1.01
AMTR_s00009p00257990 (evm_27.TU.AmTr_v1.0_scaffold00009.298)
 -1.67 - - - 0.62 -0.18 -7.21 - -6.59 -8.54 1.66 1.34 -0.18 -2.69 -0.36 0.95 1.5 0.74 0.73 0.92 0.2 -0.67
AMTR_s00009p00266410 (evm_27.TU.AmTr_v1.0_scaffold00009.394)
 0.4 1.1 -0.29 -4.14 -3.7 - -9.61 - -7.55 -5.49 1.08 0.7 -0.54 -4.59 -6.28 -5.48 1.48 2.3 0.39 -1.0 -3.68 1.78
AMTR_s00010p00133620 (evm_27.TU.AmTr_v1.0_scaffold00010.91)
 -4.08 -2.67 -3.48 - - - -9.89 - -9.36 - 1.14 1.81 0.52 -4.15 -5.72 -2.23 1.13 2.81 1.53 -1.48 -1.78 0.61
AMTR_s00010p00257130 (evm_27.TU.AmTr_v1.0_scaffold00010.397)
 - - - - -2.52 - -4.11 -4.56 -1.97 -2.27 1.51 2.69 0.32 -2.78 -2.07 - 1.13 1.08 -1.48 -0.28 2.28 -
AMTR_s00012p00243090 (evm_27.TU.AmTr_v1.0_scaffold00012.223)
 1.68 - - -0.4 -2.01 - - - -7.84 - 0.02 -0.28 1.63 -0.99 0.13 -0.84 1.87 1.85 1.24 -1.0 -3.8 -1.01
AMTR_s00016p00079460 (evm_27.TU.AmTr_v1.0_scaffold00016.42)
 -0.88 1.77 - - -0.66 - - - - - 0.53 - 1.6 - - - 2.29 2.08 - - - 1.94
AMTR_s00016p00120190 (evm_27.TU.AmTr_v1.0_scaffold00016.79)
 - - - - 3.49 - - - - - - - 1.41 0.72 0.95 - - - - - - 2.18
AMTR_s00016p00260110 (evm_27.TU.AmTr_v1.0_scaffold00016.376)
 - - - - 0.12 - 3.05 - 2.22 2.44 - - - - 0.34 - - - - 0.31 - -
AMTR_s00018p00034170 (evm_27.TU.AmTr_v1.0_scaffold00018.7)
 - - - - 3.69 - - - - - - - - - 3.18 - - - - - - -
AMTR_s00019p00187390 (evm_27.TU.AmTr_v1.0_scaffold00019.205)
 -5.73 - -3.84 -2.81 -1.01 - -3.03 - -0.76 -0.51 0.74 1.73 -0.6 -1.39 0.4 -3.23 1.66 1.05 1.16 -0.04 1.2 0.73
AMTR_s00019p00220430 (evm_27.TU.AmTr_v1.0_scaffold00019.277)
 - - - -5.41 -0.85 - -7.05 - -4.22 -4.9 0.73 0.62 0.1 -0.5 0.94 -0.11 1.89 1.58 0.71 -0.22 1.28 0.91
AMTR_s00019p00254190 (evm_27.TU.AmTr_v1.0_scaffold00019.432)
 - - - - -7.31 - - - -9.69 - -2.73 -5.27 - - - - 4.45 - - - - -
AMTR_s00020p00048620 (evm_27.TU.AmTr_v1.0_scaffold00020.18)
 - - - - - - - - - - - - - 2.58 - - - - - 4.0 - -
AMTR_s00022p00103710 (evm_27.TU.AmTr_v1.0_scaffold00022.92)
 - - - - - - - - - - - - -3.41 - -3.86 - 3.45 1.0 1.61 -0.52 - 2.37
AMTR_s00022p00103980 (evm_27.TU.AmTr_v1.0_scaffold00022.93)
 - - - - 1.81 - - - - - 1.23 - -0.23 - - - 1.96 - 3.13 0.07 - 0.68
AMTR_s00022p00152760 (evm_27.TU.AmTr_v1.0_scaffold00022.151)
 - - - - 3.93 - - - - - - - - 0.51 1.26 - - - - - - 1.57
AMTR_s00023p00202220 (evm_27.TU.AmTr_v1.0_scaffold00023.141)
 - - - - 2.9 - 2.4 - 0.71 1.96 - - - 0.62 1.13 - - - - - - -
AMTR_s00024p00225650 (evm_27.TU.AmTr_v1.0_scaffold00024.225)
 - - - - -3.43 - -7.55 - - - 2.11 1.39 -0.93 -4.58 -6.91 - 2.68 0.75 0.18 -3.55 -2.21 2.28
AMTR_s00025p00081740 (evm_27.TU.AmTr_v1.0_scaffold00025.64)
 - - - - 0.82 - - - -3.56 - - 1.02 - - 0.9 - 3.45 2.41 - - - -
AMTR_s00025p00241040 (evm_27.TU.AmTr_v1.0_scaffold00025.368)
 0.83 0.61 1.37 -1.77 -3.96 - - - - - -1.1 -0.49 -0.07 - - 1.58 3.15 -0.92 -0.4 -6.79 -1.67 -2.85
AMTR_s00027p00247950 (evm_27.TU.AmTr_v1.0_scaffold00027.161)
 -5.64 - 2.59 -5.49 -4.84 -3.49 - - -8.7 - 0.68 1.11 -4.5 - -5.85 - 2.56 2.07 0.51 -7.05 -2.99 -1.55
AMTR_s00030p00135300 (evm_27.TU.AmTr_v1.0_scaffold00030.83)
 - - 1.52 - 3.51 - 0.49 - - - - - 1.89 - 1.38 - - - - - - -
AMTR_s00031p00171370 (evm_27.TU.AmTr_v1.0_scaffold00031.80)
 2.17 1.7 - - -0.58 - - - -4.13 -5.29 0.8 1.02 -1.49 -2.45 -0.99 - -2.12 1.83 -0.24 0.15 1.26 -0.83
AMTR_s00033p00144110 (evm_27.TU.AmTr_v1.0_scaffold00033.86)
 -1.12 - - - 2.24 - -1.57 - 0.28 -0.23 0.57 - 1.34 -0.13 1.59 0.22 -0.36 - 0.52 0.44 - 0.78
AMTR_s00033p00162180 (evm_27.TU.AmTr_v1.0_scaffold00033.109)
 - - - -1.34 -2.07 - - - -7.77 -5.79 2.2 1.0 0.45 -0.57 -2.07 0.11 1.26 1.81 1.53 -0.54 0.33 -0.6
AMTR_s00038p00239660 (evm_27.TU.AmTr_v1.0_scaffold00038.249)
 - - - -2.38 -2.34 - - - - - 1.69 2.5 0.78 -1.65 -1.88 - 0.81 1.14 0.45 -0.64 2.05 -1.58
AMTR_s00041p00121620 (evm_27.TU.AmTr_v1.0_scaffold00041.88)
 - - - -5.76 -2.26 - -4.89 - -2.12 -2.91 1.88 1.83 0.11 -0.22 -1.82 0.76 1.77 1.29 0.54 0.04 -1.12 0.53
AMTR_s00042p00089230 (evm_27.TU.AmTr_v1.0_scaffold00042.19)
 - - - - 3.55 - - - 0.63 - - - - - 0.8 - - - - 2.81 - -
AMTR_s00044p00176590 (evm_27.TU.AmTr_v1.0_scaffold00044.194)
 - - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00045p00118570 (evm_27.TU.AmTr_v1.0_scaffold00045.115)
 - -0.81 -4.85 0.32 -1.72 -6.48 -6.97 - -6.34 -5.28 1.54 1.21 0.66 -1.31 -1.43 -1.3 1.99 0.94 0.7 -0.2 -0.53 1.44
AMTR_s00047p00162060 (evm_27.TU.AmTr_v1.0_scaffold00047.81)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00062p00029800 (evm_27.TU.AmTr_v1.0_scaffold00062.13)
 - - -1.54 -5.6 -5.49 - -9.92 - - - 0.78 0.67 0.99 0.67 -1.48 1.26 2.08 0.99 0.78 0.43 1.1 -0.87
AMTR_s00065p00079070 (evm_27.TU.AmTr_v1.0_scaffold00065.43)
 - - - - 3.86 - - - - - - - - 1.99 1.82 - - - - - - -
AMTR_s00065p00162460 (evm_27.TU.AmTr_v1.0_scaffold00065.122)
 1.82 - - -1.0 -5.97 - -8.5 - - - -0.73 -2.02 1.39 -3.37 -1.88 - 3.46 -1.89 -1.28 0.7 - -0.3
AMTR_s00066p00063330 (evm_27.TU.AmTr_v1.0_scaffold00066.40)
 - - - - -3.63 - - - - - 0.23 2.79 -0.36 - -3.33 - 1.73 2.66 0.68 -2.68 - 0.65
AMTR_s00066p00199930 (evm_27.TU.AmTr_v1.0_scaffold00066.267)
 - - - - -1.57 - -3.9 - -4.11 -4.59 -1.46 0.59 -0.69 -0.3 0.68 - 4.03 -3.65 -4.63 -5.75 -2.81 -5.37
AMTR_s00071p00200630 (evm_27.TU.AmTr_v1.0_scaffold00071.219)
 - - - - -0.98 - -6.11 - -5.44 -5.16 0.71 -0.75 -3.53 -6.52 -4.38 - 3.11 3.18 0.4 - - -
AMTR_s00072p00138140 (evm_27.TU.AmTr_v1.0_scaffold00072.77)
 - - - - 1.4 - - - -1.11 -2.27 - - -1.55 0.15 0.73 - - - 2.86 0.0 2.77 -1.02
AMTR_s00072p00155120 (evm_27.TU.AmTr_v1.0_scaffold00072.90)
 - - - - 2.86 - -1.92 - -0.73 -0.49 -0.37 1.39 0.78 0.79 1.23 - 0.37 - - 0.68 - 0.09
AMTR_s00078p00064410 (evm_27.TU.AmTr_v1.0_scaffold00078.35)
 0.87 0.89 -0.32 -0.43 -0.49 -0.9 -0.15 -0.39 -0.8 -0.55 1.32 0.01 0.17 -1.66 -1.22 -2.11 1.19 0.61 -0.35 0.66 -1.73 -0.86
AMTR_s00078p00096370 (evm_27.TU.AmTr_v1.0_scaffold00078.67)
 - - - - -5.45 - -8.63 - - -9.39 1.92 1.16 0.55 -3.64 -4.48 0.72 2.31 1.7 -0.38 -0.49 -0.65 1.27
AMTR_s00079p00049940 (evm_27.TU.AmTr_v1.0_scaffold00079.13)
 -0.84 - 1.7 1.66 0.23 -2.79 0.13 0.28 -0.44 -0.29 0.04 1.23 -1.67 -0.99 -1.66 0.06 0.04 -0.46 0.27 -2.97 -4.01 0.22
AMTR_s00082p00071180 (evm_27.TU.AmTr_v1.0_scaffold00082.5)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00082p00092050 (evm_27.TU.AmTr_v1.0_scaffold00082.14)
 - - - - 2.67 - - - - - - - 2.63 - - - - - - - - 3.24
AMTR_s00082p00092190 (evm_27.TU.AmTr_v1.0_scaffold00082.15)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00085p00112760 (evm_27.TU.AmTr_v1.0_scaffold00085.69)
 - - - - -1.18 - - - -5.04 - 1.9 - 0.68 -5.02 - - -1.01 3.24 2.58 - - -1.89
AMTR_s00086p00181730 (evm_27.TU.AmTr_v1.0_scaffold00086.119)
 - - - -7.2 0.07 - -7.83 - -8.85 -8.77 0.13 1.65 -0.37 -4.87 -2.36 -3.35 1.22 2.5 2.5 -0.14 -4.72 0.04
AMTR_s00088p00115700 (evm_27.TU.AmTr_v1.0_scaffold00088.81)
 - - - - -2.6 - - - - - - - 0.53 - -1.64 - 3.04 2.57 1.59 - - 1.52
AMTR_s00088p00167430 (evm_27.TU.AmTr_v1.0_scaffold00088.140)
 - - - - -0.71 - -4.49 - -3.31 -1.07 -0.34 0.83 -2.6 -1.38 1.28 - 1.28 0.9 2.21 0.36 2.33 -
AMTR_s00090p00088590 (evm_27.TU.AmTr_v1.0_scaffold00090.33)
 - - - - 3.04 - - - 1.83 -0.03 - - 1.06 0.92 1.07 - - - - - - 1.66
AMTR_s00095p00054570 (evm_27.TU.AmTr_v1.0_scaffold00095.27)
 - - - -0.5 0.39 - -0.29 - -0.64 -0.98 0.77 2.05 -1.01 -2.19 1.33 -0.69 2.12 0.3 0.93 -2.46 -0.62 -5.99
AMTR_s00096p00102060 (evm_27.TU.AmTr_v1.0_scaffold00096.58)
 - - - - 3.09 - - - - - - 2.21 2.45 -0.73 -1.08 - - - - 0.37 - 0.03
AMTR_s00097p00136170 (evm_27.TU.AmTr_v1.0_scaffold00097.37)
 - - - - 4.16 - - - - - - - 2.04 - - - - - - - - -
AMTR_s00102p00052310 (evm_27.TU.AmTr_v1.0_scaffold00102.20)
 - - - - 3.12 - - - - - - - - - 2.09 - 2.57 - - 0.53 - 0.74
AMTR_s00110p00143620 (evm_27.TU.AmTr_v1.0_scaffold00110.120)
 -0.74 -0.29 -1.73 -0.18 -3.42 -6.7 -9.25 -8.24 -11.93 - 1.55 1.47 0.73 -0.78 -1.28 -0.83 2.1 1.02 0.27 -1.33 -1.44 1.07
AMTR_s00114p00044770 (evm_27.TU.AmTr_v1.0_scaffold00114.14)
 - - - - 0.67 - -1.17 - 0.16 -1.03 0.68 0.17 0.51 -0.39 0.39 - - 1.56 1.7 0.39 1.82 0.14
AMTR_s00116p00020830 (evm_27.TU.AmTr_v1.0_scaffold00116.1)
 - - - - 0.27 - - - - - 1.46 - 1.37 -2.25 0.41 - 2.98 2.07 - - - 0.88
AMTR_s00118p00123330 (evm_27.TU.AmTr_v1.0_scaffold00118.28)
 - - - -1.62 -2.8 - -5.29 - -5.03 -5.28 1.8 1.92 -0.93 -4.34 -2.35 -0.76 1.81 1.35 1.53 0.58 0.75 -0.48
AMTR_s00122p00076940 (evm_27.TU.AmTr_v1.0_scaffold00122.27)
 0.22 0.98 0.14 -1.76 -4.07 - -7.64 - -9.07 -8.26 1.71 1.11 -1.59 0.21 0.0 -3.44 2.66 -0.51 -1.65 -0.63 -1.23 -0.06
AMTR_s00122p00120460 (evm_27.TU.AmTr_v1.0_scaffold00122.56)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00131p00089030 (evm_27.TU.AmTr_v1.0_scaffold00131.62)
 - - - - 4.06 - - - 0.49 - - - - - 1.96 - - - - - - -
AMTR_s00131p00117350 (evm_27.TU.AmTr_v1.0_scaffold00131.92)
 - - - - - - - - - - 0.61 - - -9.46 - - 4.36 - - - - -
AMTR_s00141p00052600 (evm_27.TU.AmTr_v1.0_scaffold00141.12)
 - - - - 1.7 - - - -0.25 1.46 - - - - -0.09 - - - - 1.44 - 3.52
AMTR_s00152p00086920 (evm_27.TU.AmTr_v1.0_scaffold00152.33)
 - - - - - - - - - - 2.11 1.69 1.09 -2.35 -2.7 - 2.34 1.5 0.43 - - 1.45
AMTR_s00161p00022770 (evm_27.TU.AmTr_v1.0_scaffold00161.3)
 - - - - 4.35 - - - - - - - - - 0.66 - - - - - - -
AMTR_s00216p00024260 (evm_27.TU.AmTr_v1.0_scaffold00216.4)
 - - - -4.93 -2.74 - - - - - 1.82 2.61 -0.15 -4.63 -4.43 - 1.53 1.92 0.3 -1.33 1.48 -3.43
AMTR_s00216p00024860 (evm_27.TU.AmTr_v1.0_scaffold00216.5)
 - - - -2.61 -2.83 - - - - - 1.67 1.44 -0.5 -2.83 -2.99 - 2.37 2.61 -0.25 -0.82 1.09 -
AMTR_s00429p00012440 (evm_27.TU.AmTr_v1.0_scaffold00429.1)
 -2.18 - - -4.3 -0.74 - - - - -4.82 1.65 2.96 0.14 -2.17 -2.71 - 1.06 1.2 0.11 -0.51 1.31 -4.18
AMTR_s00439p00011030 (evm_27.TU.AmTr_v1.0_scaffold00439.2)
 - - 2.35 - -1.73 - -5.95 - -4.31 - 0.74 0.1 -1.65 -3.07 -1.1 1.34 2.31 1.08 0.37 0.33 - -0.45
AMTR_s01113p00010500 (evm_27.TU.AmTr_v1.0_scaffold01113.1)
 - - - - 1.19 - - - - -2.09 - - 1.35 - - - 2.39 2.23 2.0 1.11 - -0.25
AMTR_s01903p00008330 (evm_27.TU.AmTr_v1.0_scaffold01903.1)
 -0.36 - - - -1.54 - -6.35 - - - 2.1 2.72 0.65 -2.55 -2.05 - 1.39 0.65 0.81 -0.97 0.41 -2.2
AMTR_s03052p00000290 (evm_27.TU.AmTr_v1.0_scaffold03052.1)
 0.66 - - -3.84 -1.82 - - - - - 1.96 2.4 0.5 -3.47 -3.04 -4.15 1.01 1.31 0.7 -1.01 1.24 -2.12
AMTR_s03421p00001220 (evm_27.TU.AmTr_v1.0_scaffold03421.1)
 - - - - 2.98 - - - - - - - - - 0.68 - - - 3.38 - - 1.06
AMTR_s04059p00004920 (evm_27.TU.AmTr_v1.0_scaffold04059.1)
 - - - - - - -2.92 - -3.32 - 2.4 - -2.84 -2.76 - 2.13 1.1 - 1.93 - 2.55 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.