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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.3 | 5.18 | - | - | - | - | - | - | - | |
| 2.01 | - | - | - | - | - | - | - | -0.48 | 0.57 | - | 0.25 | - | -0.34 | - | - | - | - | 0.36 | - | - | - | 2.69 | - | - | 1.18 | - | - | - | - | -1.0 | - | - | - | - | - | - | - | - | - | - | - | 1.6 | -0.51 | 0.62 | - | - | 2.95 | 2.64 | - | 1.03 | 3.34 | - | -0.39 | 1.72 | 0.86 | |
| 0.8 | 0.56 | 1.43 | -0.33 | 0.43 | 0.34 | -1.52 | 1.2 | -0.19 | -0.18 | -0.48 | -1.28 | -0.89 | -0.77 | -1.91 | -0.62 | - | -1.06 | 0.31 | -0.69 | 0.76 | -0.11 | -0.85 | -1.54 | -1.28 | 0.24 | -1.08 | -0.75 | -1.35 | -0.53 | -0.78 | -0.76 | -0.75 | -0.2 | -0.62 | -0.74 | -0.59 | -0.37 | -0.39 | -0.2 | -0.7 | -1.33 | -0.32 | -0.14 | 0.23 | 0.58 | 0.07 | 1.25 | 0.88 | 0.66 | 0.65 | 1.01 | 1.0 | 0.98 | 0.67 | 0.21 | |
| - | - | - | - | - | - | - | - | 0.79 | 0.07 | - | 3.53 | - | - | 1.33 | - | - | - | - | - | - | 2.58 | - | - | - | -3.91 | - | - | - | - | - | - | - | - | - | - | - | - | 1.4 | - | - | - | - | - | - | - | - | 3.38 | 4.04 | - | - | - | - | 1.4 | - | 0.02 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.