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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | -0.35 | - | - | -4.21 | - | - | - | -2.24 | -2.45 | - | -4.78 | -0.88 | -1.76 | -3.6 | - | - | - | -2.5 | -0.02 | - | -0.17 | -2.95 | -1.49 | -0.67 | -0.01 | 0.82 | -0.67 | -0.18 | -0.79 | 1.72 | 2.31 | 1.68 | 2.13 | 1.76 | 1.42 | 2.07 | 2.03 | 1.46 | 1.8 | 1.64 | 1.62 | -3.4 | -3.66 | - | -1.45 | -0.06 | -1.32 | -1.49 | -3.37 | -1.81 | -3.36 | -4.97 | -4.21 | -1.74 | -3.81 | |
| -5.69 | -1.58 | - | -4.36 | - | - | - | -7.8 | -4.03 | -3.01 | -7.71 | -7.65 | -3.3 | -3.63 | -5.34 | - | - | - | -3.64 | -0.41 | - | -0.77 | - | -0.73 | -0.47 | -0.32 | -2.77 | -0.98 | -0.84 | -0.7 | 1.89 | 2.1 | 1.64 | 2.21 | 2.08 | 1.28 | 2.19 | 2.33 | 1.5 | 2.19 | 1.38 | 1.98 | -3.75 | -4.29 | -3.7 | -2.44 | -1.86 | -1.65 | -1.59 | -1.11 | -0.13 | -1.02 | -2.18 | -2.95 | -2.09 | -3.2 | |
| -1.92 | 0.62 | - | -5.77 | - | - | - | -4.25 | -3.09 | -2.66 | -2.01 | - | -2.16 | -3.81 | -3.26 | - | - | - | -1.72 | 1.27 | -1.54 | 1.18 | 0.09 | 0.73 | 0.94 | 0.46 | 0.22 | 1.1 | 0.7 | 0.96 | 0.82 | 1.15 | 1.54 | 1.53 | 1.55 | 0.94 | 1.55 | 1.52 | 0.8 | 1.31 | 0.05 | 1.35 | -2.86 | -3.53 | -3.2 | 0.34 | 0.18 | -1.08 | -1.21 | -0.87 | 0.07 | -0.93 | -1.74 | -2.92 | -1.27 | -2.86 | |
| - | - | - | - | - | - | - | - | -5.4 | -2.96 | - | - | -2.2 | - | - | - | - | - | -1.66 | - | - | - | - | - | - | -6.46 | - | - | - | - | 2.12 | 2.04 | 2.18 | 2.18 | 1.74 | 0.82 | 2.53 | 2.7 | 1.97 | 2.02 | 2.62 | 2.33 | - | - | - | - | - | -5.46 | -4.04 | -3.11 | -3.9 | -1.69 | -2.21 | -2.18 | -2.34 | -5.63 | |
| -2.89 | -0.37 | - | - | -6.75 | - | - | -4.9 | -4.17 | -2.42 | -5.7 | -5.5 | -3.26 | -3.01 | -3.84 | - | - | - | -2.39 | 0.09 | -2.44 | -0.25 | -3.27 | -0.3 | 0.61 | -0.27 | -0.95 | -0.01 | -0.28 | -0.21 | 1.55 | 1.87 | 1.66 | 1.98 | 2.15 | 1.07 | 2.11 | 2.16 | 1.24 | 2.04 | 1.06 | 1.72 | -3.32 | -3.51 | -2.83 | -1.73 | -1.18 | -1.12 | -0.98 | -1.04 | 0.04 | -1.14 | -1.84 | -2.77 | -1.79 | -3.07 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.