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Heatmap: Cluster_75 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00060380 (evm_27.TU.AmTr_v1.0_scaffold00001.37)
 - - - - -0.46 - -1.09 - -0.02 1.01 - 3.11 -2.8 -3.16 -0.37 - - 2.92 - -2.42 - -1.29
AMTR_s00002p00259450 (evm_27.TU.AmTr_v1.0_scaffold00002.435)
 - 2.72 - 1.11 -0.0 - -4.52 - -5.96 -5.45 -4.7 -2.91 1.7 1.88 0.35 1.81 -4.9 - -4.08 -3.06 - -3.54
AMTR_s00003p00260840 (evm_27.TU.AmTr_v1.0_scaffold00003.341)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00005p00147860 (evm_27.TU.AmTr_v1.0_scaffold00005.46)
 - - - - - - 3.67 - - - - - - - 3.21 - - - - - - -
AMTR_s00005p00183860 (evm_27.TU.AmTr_v1.0_scaffold00005.62)
 - - - - 3.85 - - - - - - - - - 1.22 - - - - - - 2.39
AMTR_s00006p00172180 (evm_27.TU.AmTr_v1.0_scaffold00006.65)
 - - - - 2.96 - 1.88 - 2.12 1.6 - - - 1.67 - - - - - - - -
AMTR_s00007p00186970 (evm_27.TU.AmTr_v1.0_scaffold00007.153)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00007p00214030 (evm_27.TU.AmTr_v1.0_scaffold00007.198)
 - - - -0.65 -2.04 - -5.19 - - - 2.16 2.71 0.37 -2.89 -3.19 -1.61 0.77 1.57 -0.09 -5.1 - 1.38
AMTR_s00007p00253260 (evm_27.TU.AmTr_v1.0_scaffold00007.292)
 - - - - 2.16 - - - 3.28 - - - - - 2.97 - - - - - - -
AMTR_s00008p00012240 (evm_27.TU.AmTr_v1.0_scaffold00008.1)
 - - - - -0.3 - -1.61 - - - - - 1.77 3.38 1.05 - - - - - - 2.32
AMTR_s00009p00254200 (evm_27.TU.AmTr_v1.0_scaffold00009.268)
 - - - 1.56 3.1 - - - 0.33 - - - 1.47 - -0.08 - - - - 2.46 - -
AMTR_s00009p00254230 (evm_27.TU.AmTr_v1.0_scaffold00009.269)
 - - - - 1.84 - - - -1.28 0.36 - 3.87 - - - - - - - - - 1.07
AMTR_s00012p00200050 (evm_27.TU.AmTr_v1.0_scaffold00012.132)
 - - - - 3.23 - 1.97 - 1.93 1.39 - - - - 1.18 - - - - - - -
AMTR_s00013p00245060 (evm_27.TU.AmTr_v1.0_scaffold00013.206)
 - - - - 4.2 - - - - - - - - - 1.86 - - - - - - -
AMTR_s00015p00258130 (evm_27.TU.AmTr_v1.0_scaffold00015.117)
 - - - - 1.48 - 2.24 - 1.37 1.63 - 1.99 - 0.11 1.91 - - - - - - -
AMTR_s00018p00152330 (evm_27.TU.AmTr_v1.0_scaffold00018.81)
 - - - - 4.28 - 0.13 - - - - - - -0.42 -0.56 - - - - - - -
AMTR_s00018p00245180 (evm_27.TU.AmTr_v1.0_scaffold00018.155)
 0.01 0.57 1.19 -1.06 -1.7 - -2.96 -3.99 -3.67 -3.4 -0.08 0.96 1.59 0.24 0.24 -1.0 -0.03 1.99 0.19 -0.83 -3.33 -0.82
AMTR_s00019p00137880 (evm_27.TU.AmTr_v1.0_scaffold00019.122)
 - - - - 3.89 - - - - -0.95 - - -0.75 -0.36 0.07 - - - - -0.49 - 1.83
AMTR_s00020p00246490 (evm_27.TU.AmTr_v1.0_scaffold00020.116)
 - - - - 0.77 - - - -1.17 - - - - - 1.52 - - - - - 3.88 1.18
AMTR_s00024p00243080 (evm_27.TU.AmTr_v1.0_scaffold00024.293)
 - - - - - - - - - - - 4.46 - - - - - - - - - -
AMTR_s00026p00235000 (evm_27.TU.AmTr_v1.0_scaffold00026.129)
 - - - - 3.33 - 2.28 - - -0.11 - - 1.56 - -0.13 - - - - - - 1.2
AMTR_s00027p00202180 (evm_27.TU.AmTr_v1.0_scaffold00027.70)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00029p00170030 (evm_27.TU.AmTr_v1.0_scaffold00029.226)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00033p00227300 (evm_27.TU.AmTr_v1.0_scaffold00033.214)
 - - - - 4.3 - - - 0.38 -0.35 - - - - -1.99 - - - - - - -
AMTR_s00033p00227350 (evm_27.TU.AmTr_v1.0_scaffold00033.215)
 - - - - 3.28 - - - - 3.62 - - - - - - - - - - - -
AMTR_s00034p00144680 (evm_27.TU.AmTr_v1.0_scaffold00034.43)
 - - - - 2.55 - - - 2.35 3.1 - - - - 1.31 - - - - - - -
AMTR_s00034p00241900 (evm_27.TU.AmTr_v1.0_scaffold00034.133)
 - - - - 3.8 - 2.28 - 1.68 - - - - - - - - - - - - -
AMTR_s00041p00237050 (evm_27.TU.AmTr_v1.0_scaffold00041.297)
 - - - - 2.45 - - - 3.31 2.72 - - - - - - - - - - - -
AMTR_s00046p00061320 (evm_27.TU.AmTr_v1.0_scaffold00046.16)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00048p00141400 (evm_27.TU.AmTr_v1.0_scaffold00048.90)
 - -2.93 - -2.66 -2.24 - -0.3 0.21 2.87 2.77 -1.9 -0.49 1.27 0.85 -2.87 -3.76 -6.25 - - - - -6.53
AMTR_s00050p00214960 (evm_27.TU.AmTr_v1.0_scaffold00050.81)
 - - - - 1.4 - 2.6 - 1.26 2.77 - - 1.37 0.56 - - - - - - - -
AMTR_s00055p00160410 (evm_27.TU.AmTr_v1.0_scaffold00055.78)
 -1.94 -1.62 -1.19 -1.58 1.27 - -6.2 -9.55 -8.76 -8.6 0.23 4.01 -2.76 -1.69 -1.33 -7.5 -8.92 - -7.19 -11.02 - -
AMTR_s00056p00132920 (evm_27.TU.AmTr_v1.0_scaffold00056.104)
 -1.75 -4.96 -0.99 -3.67 -2.55 -2.69 -4.23 -1.92 -3.33 -3.53 1.27 3.81 -2.5 -4.7 -2.69 -5.1 -2.82 -2.82 -4.55 - -6.88 1.62
AMTR_s00061p00211920 (evm_27.TU.AmTr_v1.0_scaffold00061.262)
 - - -0.29 -0.54 -0.16 - - - 0.31 -9.94 0.55 - 0.65 1.13 -0.54 - 1.48 - - -0.37 2.92 0.4
AMTR_s00062p00141690 (evm_27.TU.AmTr_v1.0_scaffold00062.125)
 - - - - 0.87 - 1.14 - 3.0 1.78 - - 2.22 0.89 - - - - - - - -
AMTR_s00062p00184220 (evm_27.TU.AmTr_v1.0_scaffold00062.181)
 - - - - 3.41 - 3.51 - - - - - - - - - - - - - - -
AMTR_s00063p00174640 (evm_27.TU.AmTr_v1.0_scaffold00063.54)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00067p00152170 (evm_27.TU.AmTr_v1.0_scaffold00067.146)
 - - - - 3.49 - - - -1.55 - - - 0.89 - 2.01 - - - - - - 2.18
AMTR_s00069p00147590 (evm_27.TU.AmTr_v1.0_scaffold00069.113)
 - - - - 4.26 - - - -0.09 - - - - - 0.19 - - - - -0.36 - -
AMTR_s00070p00194870 (evm_27.TU.AmTr_v1.0_scaffold00070.128)
 - - - - 4.18 - 1.94 - - - - - - - - - - - - - - -
AMTR_s00071p00014510 (evm_27.TU.AmTr_v1.0_scaffold00071.3)
 1.25 2.67 - - 0.39 - -2.51 - - - - 3.29 -0.02 -3.07 -1.52 - -1.28 - - - - -2.73
AMTR_s00071p00014930 (evm_27.TU.AmTr_v1.0_scaffold00071.4)
 - - - - 2.11 - - - -1.1 - - 3.52 2.22 - 0.12 - - - - - - -
AMTR_s00072p00174000 (evm_27.TU.AmTr_v1.0_scaffold00072.123)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00077p00047440 (evm_27.TU.AmTr_v1.0_scaffold00077.27)
 - - - - -1.03 - -6.58 - - - 0.31 0.65 1.94 3.42 -0.97 - - - - - - 1.88
AMTR_s00077p00192840 (evm_27.TU.AmTr_v1.0_scaffold00077.235)
 - - - - 2.45 - -1.8 - - - - - - -2.35 1.77 2.34 0.76 - - - 2.55 -
AMTR_s00092p00021420 (evm_27.TU.AmTr_v1.0_scaffold00092.9)
 -0.76 - - - 0.87 - - - - - 2.99 2.82 -1.84 1.51 -0.42 - - - - - - -0.54
AMTR_s00095p00143560 (evm_27.TU.AmTr_v1.0_scaffold00095.108)
 - - - - 3.16 - -1.1 - -0.3 -0.29 1.87 - -0.31 -0.94 0.65 - 0.69 - - 0.98 - -0.3
AMTR_s00096p00033630 (evm_27.TU.AmTr_v1.0_scaffold00096.12)
 - - - - 3.26 - 1.6 - 1.31 1.27 - - - -0.59 1.21 - - - - - - 0.62
AMTR_s00099p00033600 (evm_27.TU.AmTr_v1.0_scaffold00099.17)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00131p00090830 (evm_27.TU.AmTr_v1.0_scaffold00131.63)
 - - - - 1.8 - 0.12 -1.78 1.01 1.38 - 3.51 -3.62 -2.2 -0.44 - - - -3.4 - - -
AMTR_s00131p00091100 (evm_27.TU.AmTr_v1.0_scaffold00131.64)
 - - - 1.31 1.36 - -0.58 - 0.63 0.76 -1.57 2.56 -2.29 0.26 0.6 -0.33 -0.82 -0.95 - 0.42 - -0.58
AMTR_s00131p00091500 (evm_27.TU.AmTr_v1.0_scaffold00131.65)
 - - - 1.04 -0.17 - -1.46 - -0.74 -0.79 -1.04 2.14 -0.21 1.68 0.15 -1.69 -1.0 -0.91 -1.3 1.54 0.26 0.67
AMTR_s00134p00069640 (evm_27.TU.AmTr_v1.0_scaffold00134.17)
 - - 0.22 -6.95 -0.02 0.87 -3.77 -3.95 1.54 1.15 -0.44 1.4 1.0 1.02 -0.27 -1.35 -0.56 -1.9 -1.98 -1.91 -1.68 1.23
AMTR_s00136p00019290 (evm_27.TU.AmTr_v1.0_scaffold00136.3)
 - - - - 4.16 - - - - - - - - -0.52 1.78 - - - - - - -
AMTR_s00215p00017850 (evm_27.TU.AmTr_v1.0_scaffold00215.1)
 - - - - -3.04 - -3.35 - -5.84 - 2.02 2.8 1.43 2.62 -2.58 - -1.92 0.12 -2.01 -4.53 - -3.56
AMTR_s00215p00018550 (evm_27.TU.AmTr_v1.0_scaffold00215.2)
 - - - -1.99 - - -2.83 - -4.24 - 1.11 0.9 1.96 3.04 -1.78 - -0.16 1.7 -0.27 - - -2.86
AMTR_s00260p00014760 (evm_27.TU.AmTr_v1.0_scaffold00260.1)
 1.29 3.1 -1.6 - 0.78 - -4.06 -6.43 - -6.38 -0.33 2.39 1.05 -3.43 -1.86 - - -1.69 - - - -4.71
AMTR_s00260p00015480 (evm_27.TU.AmTr_v1.0_scaffold00260.2)
 2.64 3.38 - - -0.11 - -5.32 - - - -3.57 1.89 -1.53 -3.23 -2.59 - - - - - - -
AMTR_s00352p00011630 (evm_27.TU.AmTr_v1.0_scaffold00352.1)
 1.87 2.64 - -2.35 0.71 - -4.81 - - - - 2.91 0.86 -0.98 -2.31 - - - - - - -2.27
AMTR_s00475p00008300 (evm_27.TU.AmTr_v1.0_scaffold00475.1)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s01058p00005000 (evm_27.TU.AmTr_v1.0_scaffold01058.1)
 0.62 - -0.59 - -0.07 -0.12 0.68 2.05 2.36 2.4 -2.74 0.04 -3.37 -1.88 -2.3 - -6.56 - - -7.72 -6.77 -9.19
AMTR_s01072p00000950 (evm_27.TU.AmTr_v1.0_scaffold01072.1)
 - - - - -2.85 - -2.12 - - - 1.79 1.81 1.62 3.19 -3.8 - -1.91 1.04 - -3.26 - -
AMTR_s01234p00005010 (evm_27.TU.AmTr_v1.0_scaffold01234.1)
 -3.17 - 1.89 - -3.11 - -5.28 - -3.84 -6.14 -0.32 3.96 0.06 -1.86 -6.76 -2.48 - - - - -3.27 -
AMTR_s02052p00000390 (evm_27.TU.AmTr_v1.0_scaffold02052.1)
 - - - - - - -1.38 - - - 0.93 2.55 - 3.34 -0.56 -1.97 - 1.47 - - - -
AMTR_s02064p00009480 (evm_27.TU.AmTr_v1.0_scaffold02064.1)
 0.91 -0.13 -0.33 - 0.35 - 1.15 0.73 2.34 2.16 -2.42 1.36 -1.59 -1.42 -2.17 - -4.21 - - -7.55 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.