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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.47 | -0.85 | -1.18 | -2.65 | -0.33 | -0.67 | - | 0.84 | -2.42 | -2.32 | 2.82 | 2.18 | 2.08 | 1.14 | 1.96 | -4.01 | - | -2.0 | -1.68 | -0.17 | -0.82 | 0.11 | -1.38 | 0.33 | 0.5 | 0.5 | -1.29 | -0.54 | -0.89 | -0.92 | 0.04 | 0.24 | 0.03 | -0.34 | -0.37 | -0.04 | -0.18 | -0.29 | -0.25 | -0.03 | 0.51 | -0.17 | -2.19 | -2.36 | -1.74 | -0.3 | 0.19 | -1.28 | -1.05 | -1.19 | -1.43 | -0.98 | -1.17 | -1.3 | -0.27 | 0.0 | |
| -0.85 | 1.41 | 0.69 | 0.25 | -0.5 | 0.59 | -3.42 | 1.17 | -1.81 | -0.74 | 2.92 | 2.16 | 2.17 | 1.83 | 1.94 | -2.97 | - | -2.28 | -0.95 | -1.5 | -0.31 | 1.14 | -2.91 | -0.06 | -0.46 | 0.69 | -1.19 | -1.81 | -2.27 | -1.81 | -1.42 | -1.74 | -1.29 | -1.31 | -1.62 | -1.3 | -1.41 | -0.95 | -1.19 | -1.27 | -0.92 | -1.94 | -4.46 | -5.97 | -5.28 | -1.1 | 1.09 | -1.54 | -0.99 | -0.52 | -1.23 | -2.05 | -1.31 | -0.99 | -1.56 | -0.24 | |
| -1.14 | -1.03 | 0.64 | 0.37 | -0.14 | -1.59 | -1.7 | 1.57 | -2.34 | -2.48 | 2.65 | 1.91 | 1.85 | 1.5 | 1.8 | -3.1 | - | -1.54 | -2.17 | -1.53 | 0.32 | -0.13 | -0.76 | -2.88 | -2.01 | 0.57 | -4.32 | -2.62 | -2.58 | -1.79 | -0.13 | -0.42 | -0.42 | -0.31 | -0.01 | 0.14 | 0.01 | 0.12 | -0.09 | -0.28 | -0.19 | -0.09 | -0.59 | -1.32 | -0.52 | 0.51 | 0.46 | -1.02 | -0.77 | -0.81 | -0.35 | -0.47 | -1.22 | -1.17 | 0.22 | -1.84 | |
| -3.54 | 2.97 | -4.12 | -5.99 | -0.93 | -2.53 | -3.16 | -0.02 | -8.27 | -9.75 | 3.49 | 2.85 | 3.04 | 2.22 | 2.45 | -3.99 | - | -1.26 | -6.93 | -4.89 | 0.01 | 0.59 | -0.59 | - | - | 0.28 | - | - | - | - | -9.04 | - | -7.13 | -7.83 | - | - | - | -6.05 | - | - | - | - | -6.01 | -8.76 | - | 1.27 | 0.21 | -3.58 | -2.79 | -5.18 | -5.89 | -6.2 | - | -5.53 | -0.85 | - | |
| -4.37 | 3.25 | -2.89 | -4.67 | -0.79 | -2.08 | - | 0.18 | - | - | 3.42 | 2.84 | 2.83 | 2.09 | 2.35 | -4.32 | - | -3.78 | -6.8 | -5.33 | 0.6 | 0.85 | -1.17 | - | - | -0.14 | - | - | - | - | - | - | - | -7.48 | - | -6.83 | - | - | - | -7.97 | - | -7.57 | -6.2 | -7.21 | - | 1.69 | 0.37 | -4.9 | -4.06 | -4.29 | -5.67 | -6.63 | - | -6.92 | -1.54 | - | |
| -1.27 | 3.03 | -5.29 | -6.98 | -2.0 | 0.39 | - | -1.11 | -4.26 | -7.02 | 3.76 | 2.88 | 2.56 | 1.8 | 1.81 | -8.8 | - | - | -6.72 | -4.8 | -1.17 | 1.67 | -2.11 | -6.64 | -5.42 | 1.14 | -6.4 | -6.9 | -7.34 | -7.02 | -5.92 | -5.61 | -6.03 | -5.75 | -5.89 | -5.78 | -6.47 | -5.83 | -6.26 | -5.29 | -5.86 | -6.2 | -4.19 | -5.0 | -7.23 | -1.02 | 1.95 | -2.59 | -2.03 | -5.23 | -3.94 | -4.84 | -7.45 | -7.43 | -3.51 | -5.0 | |
| 0.98 | -0.07 | -2.69 | - | 0.38 | 2.42 | -4.76 | -0.96 | -6.75 | - | 3.76 | 2.91 | 2.51 | 1.6 | 1.73 | - | - | - | - | -8.13 | -1.11 | 1.8 | -3.8 | - | -7.83 | 0.97 | - | -7.19 | - | - | -6.21 | -6.34 | -6.49 | -6.64 | -7.65 | -6.84 | -6.65 | -7.17 | -6.29 | -5.93 | -7.67 | -5.89 | -3.2 | -4.79 | - | -2.6 | 2.24 | -2.33 | -1.33 | -5.74 | -3.36 | -3.18 | -6.99 | -9.85 | -0.59 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.