Heatmap: Cluster_256 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00002p00150300 (evm_27.TU.AmTr_v1.0_scaffold00002.118)	0.0	0.28	0.0	0.02	0.36	0.0	0.03	0.0	0.12	0.1	1.0	0.9	0.41	0.31	0.5	0.34	1.0	0.74	0.7	0.37	0.63	0.36
AMTR_s00002p00226970 (evm_27.TU.AmTr_v1.0_scaffold00002.252)	0.54	0.18	0.43	0.43	0.23	0.01	0.0	0.0	0.01	0.01	1.0	0.56	0.33	0.27	0.17	0.37	0.69	0.71	0.75	0.85	0.46	0.34
AMTR_s00002p00269010 (evm_27.TU.AmTr_v1.0_scaffold00002.545)	0.18	0.07	0.12	0.05	0.09	0.01	0.06	0.0	0.06	0.06	1.0	0.84	0.35	0.36	0.34	0.4	0.77	0.36	0.54	0.43	0.24	0.38
AMTR_s00004p00029120 (evm_27.TU.AmTr_v1.0_scaffold00004.12)	0.53	0.08	0.02	0.24	0.62	0.0	0.12	0.0	0.2	0.17	1.0	0.79	0.72	0.48	0.54	0.48	0.96	0.81	0.58	0.64	0.48	0.55
AMTR_s00004p00154100 (evm_27.TU.AmTr_v1.0_scaffold00004.161)	0.0	0.02	0.36	0.35	0.08	0.0	0.05	0.0	0.05	0.04	0.86	0.67	0.33	0.23	0.13	0.48	1.0	0.78	0.72	0.42	0.42	0.34
AMTR_s00005p00184610 (evm_27.TU.AmTr_v1.0_scaffold00005.64)	0.37	0.03	0.0	0.07	0.06	0.0	0.13	0.0	0.19	0.2	1.0	0.59	0.38	0.12	0.3	0.43	0.74	0.54	0.33	0.37	0.25	0.3
AMTR_s00005p00256120 (evm_27.TU.AmTr_v1.0_scaffold00005.175)	0.64	0.4	0.99	0.37	0.52	0.03	0.38	0.19	0.49	0.46	1.0	0.9	0.59	0.56	0.65	0.72	0.94	0.73	0.66	0.92	0.27	0.6
AMTR_s00009p00176380 (evm_27.TU.AmTr_v1.0_scaffold00009.107)	0.05	0.58	0.0	0.25	0.39	0.0	0.21	0.0	0.21	0.18	0.91	1.0	0.66	0.51	0.4	0.5	0.75	0.52	0.82	0.68	0.87	0.4
AMTR_s00010p00042520 (evm_27.TU.AmTr_v1.0_scaffold00010.21)	0.0	0.57	0.22	0.31	0.07	0.0	0.02	0.0	0.08	0.05	0.89	0.91	0.25	0.18	0.1	0.45	0.99	1.0	0.77	0.35	0.52	0.27
AMTR_s00010p00163020 (evm_27.TU.AmTr_v1.0_scaffold00010.125)	0.1	0.64	0.3	0.39	0.32	0.01	0.18	0.0	0.13	0.14	1.0	0.8	0.59	0.48	0.44	0.45	0.95	0.52	0.6	0.7	0.43	0.53
AMTR_s00013p00197230 (evm_27.TU.AmTr_v1.0_scaffold00013.129)	0.15	0.33	0.15	0.41	0.15	0.0	0.0	0.0	0.15	0.15	1.0	0.76	0.54	0.52	0.27	0.96	0.63	0.85	0.89	0.49	0.63	0.68
AMTR_s00016p00106660 (evm_27.TU.AmTr_v1.0_scaffold00016.68)	0.08	0.16	0.11	0.38	0.13	0.0	0.01	0.0	0.01	0.01	1.0	0.68	0.46	0.4	0.31	0.47	0.9	0.54	0.6	0.41	0.26	0.43
AMTR_s00016p00215520 (evm_27.TU.AmTr_v1.0_scaffold00016.191)	0.15	0.85	0.35	0.23	0.25	0.01	0.05	0.0	0.05	0.05	1.0	0.82	0.52	0.3	0.19	0.39	0.91	0.54	0.6	0.35	0.32	0.36
AMTR_s00016p00259070 (evm_27.TU.AmTr_v1.0_scaffold00016.361)	0.67	0.0	0.4	0.44	0.53	0.0	0.03	0.03	0.06	0.07	0.91	1.0	0.65	0.39	0.41	0.81	0.83	0.71	0.75	0.54	0.47	0.53
AMTR_s00017p00247060 (evm_27.TU.AmTr_v1.0_scaffold00017.235)	0.03	0.56	0.04	0.35	0.11	0.03	0.02	0.0	0.02	0.02	1.0	0.75	0.35	0.11	0.07	0.47	0.95	0.68	0.48	0.28	0.36	0.31
AMTR_s00019p00093260 (evm_27.TU.AmTr_v1.0_scaffold00019.69)	0.0	0.0	0.0	0.22	0.14	0.0	0.01	0.0	0.01	0.01	0.72	0.38	0.23	0.09	0.26	0.44	1.0	0.92	0.53	0.35	0.58	0.17
AMTR_s00022p00240520 (evm_27.TU.AmTr_v1.0_scaffold00022.342)	0.36	0.13	0.32	0.37	0.16	0.01	0.1	0.0	0.11	0.12	1.0	0.78	0.44	0.38	0.26	0.43	0.56	0.66	0.67	0.54	0.26	0.38
AMTR_s00023p00028640 (evm_27.TU.AmTr_v1.0_scaffold00023.6)	0.0	0.0	0.0	0.16	0.02	0.0	0.0	0.0	0.01	0.01	1.0	0.57	0.16	0.35	0.22	0.63	0.78	0.47	0.56	0.4	0.36	0.29
AMTR_s00023p00029140 (evm_27.TU.AmTr_v1.0_scaffold00023.7)	0.0	0.0	0.27	0.05	0.03	0.0	0.01	0.0	0.01	0.01	1.0	0.65	0.38	0.39	0.23	0.58	0.76	0.48	0.51	0.36	0.14	0.38
AMTR_s00025p00124790 (evm_27.TU.AmTr_v1.0_scaffold00025.114)	0.32	0.47	0.03	0.51	0.15	0.0	0.04	0.0	0.07	0.06	0.94	0.67	0.52	0.48	0.32	0.6	1.0	0.76	0.55	0.48	0.39	0.43
AMTR_s00025p00210690 (evm_27.TU.AmTr_v1.0_scaffold00025.279)	0.06	0.14	0.06	0.26	0.12	0.0	0.0	0.01	0.0	0.01	0.85	0.69	0.3	0.2	0.17	0.46	1.0	0.55	0.38	0.26	0.19	0.39
AMTR_s00026p00123370 (evm_27.TU.AmTr_v1.0_scaffold00026.56)	0.31	0.22	0.13	0.48	0.34	0.0	0.06	0.04	0.09	0.07	1.0	0.7	0.47	0.34	0.28	0.5	0.64	0.63	0.68	0.53	0.37	0.33
AMTR_s00029p00148220 (evm_27.TU.AmTr_v1.0_scaffold00029.175)	0.06	0.32	0.0	0.28	0.11	0.01	0.02	0.0	0.06	0.06	0.77	0.8	0.41	0.22	0.19	0.3	1.0	0.52	0.39	0.2	0.29	0.33
AMTR_s00030p00120950 (evm_27.TU.AmTr_v1.0_scaffold00030.69)	0.19	0.24	0.0	0.01	0.09	0.0	0.01	0.0	0.05	0.03	1.0	0.73	0.32	0.22	0.48	0.31	0.87	0.54	0.53	0.39	0.51	0.35
AMTR_s00032p00104970 (evm_27.TU.AmTr_v1.0_scaffold00032.66)	0.39	0.27	0.2	0.21	0.19	0.01	0.16	0.01	0.21	0.2	1.0	0.76	0.38	0.32	0.41	0.49	0.76	0.63	0.57	0.48	0.4	0.4
AMTR_s00036p00036310 (evm_27.TU.AmTr_v1.0_scaffold00036.9)	0.26	0.46	0.06	0.11	0.4	0.0	0.02	0.0	0.02	0.03	1.0	0.74	0.79	0.49	0.38	0.58	0.86	0.6	0.67	0.65	0.59	0.55
AMTR_s00039p00209870 (evm_27.TU.AmTr_v1.0_scaffold00039.178)	0.37	0.35	0.08	0.24	0.22	0.0	0.0	0.0	0.03	0.01	1.0	0.89	0.63	0.16	0.34	0.48	0.68	0.55	0.45	0.47	0.42	0.44
AMTR_s00040p00229490 (evm_27.TU.AmTr_v1.0_scaffold00040.275)	0.07	0.32	0.39	0.31	0.3	0.01	0.13	0.06	0.15	0.14	0.93	1.0	0.72	0.43	0.36	0.43	0.67	0.66	0.71	0.69	0.4	0.45
AMTR_s00042p00136580 (evm_27.TU.AmTr_v1.0_scaffold00042.33)	0.0	0.29	0.0	0.0	0.2	0.0	0.0	0.0	0.01	0.0	1.0	0.53	0.38	0.17	0.1	0.3	0.83	0.43	0.42	0.16	0.19	0.24
AMTR_s00044p00046290 (evm_27.TU.AmTr_v1.0_scaffold00044.19)	0.0	0.0	0.0	0.35	0.12	0.0	0.09	0.0	0.09	0.07	1.0	0.86	0.52	0.31	0.14	0.58	0.95	0.77	0.88	0.47	0.39	0.47
AMTR_s00044p00046630 (evm_27.TU.AmTr_v1.0_scaffold00044.20)	0.09	0.26	0.0	0.32	0.08	0.0	0.08	0.09	0.06	0.07	1.0	0.82	0.64	0.29	0.14	0.5	0.85	0.67	0.9	0.46	0.27	0.47
AMTR_s00046p00229830 (evm_27.TU.AmTr_v1.0_scaffold00046.173)	0.09	0.29	0.06	0.05	0.19	0.01	0.03	0.0	0.06	0.06	1.0	0.79	0.62	0.53	0.36	0.6	0.48	0.44	0.48	0.42	0.24	0.37
AMTR_s00049p00194600 (evm_27.TU.AmTr_v1.0_scaffold00049.205)	0.15	0.41	0.0	0.19	0.25	0.0	0.02	0.03	0.05	0.03	1.0	0.86	0.65	0.37	0.3	0.64	0.87	0.44	0.61	0.65	0.48	0.53
AMTR_s00049p00231960 (evm_27.TU.AmTr_v1.0_scaffold00049.284)	0.25	0.16	0.16	0.6	0.14	0.0	0.01	0.0	0.01	0.02	1.0	0.86	0.51	0.31	0.28	0.35	0.9	0.67	0.64	0.52	0.45	0.49
AMTR_s00055p00198590 (evm_27.TU.AmTr_v1.0_scaffold00055.138)	0.31	0.0	0.19	0.38	0.2	0.0	0.07	0.01	0.14	0.14	1.0	0.87	0.45	0.39	0.38	0.73	0.77	0.46	0.5	0.4	0.29	0.4
AMTR_s00056p00172610 (evm_27.TU.AmTr_v1.0_scaffold00056.150)	0.11	0.46	0.01	0.26	0.24	0.07	0.15	0.0	0.16	0.15	0.85	0.64	0.27	0.27	0.29	0.75	1.0	0.62	0.62	0.46	0.31	0.27
AMTR_s00058p00123890 (evm_27.TU.AmTr_v1.0_scaffold00058.86)	0.06	0.18	0.03	0.36	0.31	0.0	0.09	0.01	0.06	0.07	1.0	0.84	0.46	0.4	0.43	0.62	0.89	0.61	0.69	0.6	0.32	0.39
AMTR_s00058p00185710 (evm_27.TU.AmTr_v1.0_scaffold00058.180)	0.46	0.01	0.0	0.0	0.3	0.0	0.17	0.02	0.21	0.15	1.0	0.85	0.53	0.38	0.47	0.43	0.88	0.57	0.62	0.57	0.66	0.46
AMTR_s00058p00198540 (evm_27.TU.AmTr_v1.0_scaffold00058.200)	0.37	0.19	0.07	0.01	0.11	0.0	0.12	0.05	0.2	0.16	0.88	0.58	0.46	0.45	0.24	0.45	1.0	0.56	0.59	0.77	0.62	0.41
AMTR_s00059p00168200 (evm_27.TU.AmTr_v1.0_scaffold00059.161)	0.16	0.52	0.04	0.08	0.28	0.0	0.04	0.0	0.09	0.09	1.0	0.99	0.48	0.37	0.26	0.54	0.61	0.66	0.46	0.42	0.29	0.47
AMTR_s00067p00092640 (evm_27.TU.AmTr_v1.0_scaffold00067.71)	0.21	0.38	0.41	0.5	0.36	0.01	0.05	0.03	0.06	0.06	1.0	0.64	0.44	0.36	0.28	0.32	0.79	0.74	0.69	0.42	0.2	0.37
AMTR_s00078p00149090 (evm_27.TU.AmTr_v1.0_scaffold00078.125)	0.03	0.06	0.12	0.1	0.12	0.0	0.01	0.0	0.02	0.02	1.0	0.46	0.29	0.17	0.17	0.25	0.7	0.35	0.33	0.31	0.28	0.33
AMTR_s00078p00166420 (evm_27.TU.AmTr_v1.0_scaffold00078.156)	0.23	0.08	0.4	0.52	0.13	0.12	0.15	0.03	0.18	0.18	0.99	1.0	0.42	0.44	0.29	0.59	0.6	0.89	0.84	0.55	0.93	0.36
AMTR_s00095p00048830 (evm_27.TU.AmTr_v1.0_scaffold00095.23)	0.37	0.15	0.08	0.29	0.52	0.0	0.07	0.0	0.11	0.12	1.0	0.79	0.57	0.35	0.4	0.51	0.96	0.86	0.8	0.44	0.34	0.44
AMTR_s00104p00115330 (evm_27.TU.AmTr_v1.0_scaffold00104.48)	0.34	0.38	0.0	0.26	0.28	0.0	0.03	0.0	0.03	0.04	1.0	0.87	0.64	0.6	0.42	0.8	0.71	0.64	0.71	0.43	0.46	0.44
AMTR_s00110p00152340 (evm_27.TU.AmTr_v1.0_scaffold00110.129)	0.06	0.02	0.22	0.33	0.08	0.04	0.11	0.0	0.19	0.2	1.0	0.79	0.59	0.51	0.33	0.61	0.7	0.69	0.7	0.64	0.69	0.49
AMTR_s00110p00155630 (evm_27.TU.AmTr_v1.0_scaffold00110.131)	0.02	0.31	0.27	0.14	0.11	0.0	0.0	0.0	0.0	0.0	1.0	0.73	0.49	0.35	0.15	0.44	0.58	0.47	0.39	0.29	0.24	0.3
AMTR_s00134p00078680 (evm_27.TU.AmTr_v1.0_scaffold00134.25)	0.0	0.98	0.0	0.36	0.28	0.0	0.01	0.0	0.01	0.02	1.0	0.65	0.55	0.45	0.47	0.43	0.97	0.81	0.7	0.6	0.75	0.5
AMTR_s00135p00095240 (evm_27.TU.AmTr_v1.0_scaffold00135.54)	0.04	0.64	0.41	0.37	0.22	0.11	0.12	0.01	0.17	0.14	0.75	0.69	0.45	0.24	0.09	0.28	1.0	0.64	0.52	0.21	0.45	0.36
AMTR_s00145p00081540 (evm_27.TU.AmTr_v1.0_scaffold00145.30)	0.19	0.14	0.04	0.01	0.52	0.03	0.12	0.02	0.12	0.12	1.0	0.94	0.71	0.69	0.53	0.54	0.75	0.78	0.85	0.62	0.75	0.42
AMTR_s00146p00092580 (evm_27.TU.AmTr_v1.0_scaffold00146.57)	0.22	0.01	0.21	0.09	0.39	0.01	0.44	0.0	0.32	0.39	1.0	0.61	0.61	0.4	0.66	0.53	0.68	0.82	0.53	0.71	0.37	0.52
AMTR_s00155p00036470 (evm_27.TU.AmTr_v1.0_scaffold00155.17)	0.33	0.34	0.36	0.01	0.08	0.02	0.02	0.0	0.03	0.02	1.0	0.57	0.28	0.33	0.23	0.46	0.76	0.51	0.39	0.37	0.46	0.33
AMTR_s00166p00076690 (evm_27.TU.AmTr_v1.0_scaffold00166.44)	0.5	0.07	0.27	0.07	0.51	0.03	0.23	0.07	0.31	0.28	1.0	0.77	0.52	0.5	0.74	0.6	0.93	0.64	0.6	0.7	0.57	0.56
AMTR_s00171p00064430 (evm_27.TU.AmTr_v1.0_scaffold00171.48)	0.12	0.0	0.29	0.41	0.21	0.02	0.04	0.03	0.05	0.06	0.95	0.75	0.35	0.34	0.3	0.55	1.0	0.76	0.51	0.36	0.47	0.44
AMTR_s00210p00017530 (evm_27.TU.AmTr_v1.0_scaffold00210.3)	0.0	0.82	0.18	0.15	0.09	0.01	0.04	0.0	0.08	0.06	1.0	0.8	0.63	0.52	0.3	0.59	0.69	0.6	0.6	0.49	0.69	0.41

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)