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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -3.2 | -5.05 | 1.16 | 2.17 | 0.31 | 0.49 | 0.17 | 1.11 | 0.15 | -2.13 | 1.28 | 1.53 | 0.98 | 0.43 | 1.59 | -1.18 | - | -0.41 | -2.26 | - | -3.1 | -4.3 | -4.11 | -4.54 | - | -2.55 | - | -3.96 | - | -4.58 | 1.01 | 0.91 | 0.88 | 0.58 | 0.37 | 0.59 | 0.26 | 0.74 | 0.36 | 0.51 | 1.02 | 0.13 | -0.05 | -0.08 | -0.03 | -3.35 | -2.53 | 0.28 | 0.09 | -0.38 | -0.92 | -1.74 | -0.6 | -1.41 | -0.34 | -0.55 | |
| -1.66 | -0.01 | -0.23 | -0.05 | -2.6 | -3.6 | -4.91 | 2.13 | -1.2 | -1.39 | -0.49 | 0.58 | 0.5 | 0.46 | 1.29 | -8.38 | - | -2.96 | -1.21 | -0.78 | -1.18 | -0.65 | -4.26 | -1.62 | -1.99 | -1.33 | -0.98 | -1.02 | -2.29 | -0.83 | 0.75 | 0.43 | 0.98 | 0.95 | 0.83 | 1.03 | 1.12 | 1.2 | 1.1 | 0.93 | 1.01 | 0.64 | -1.98 | -1.46 | -1.15 | -2.27 | -1.92 | -0.14 | -0.22 | -0.35 | 0.72 | 0.79 | 0.03 | -0.32 | 0.83 | 0.08 | |
| -0.35 | - | - | - | - | - | - | 2.62 | -5.85 | -3.86 | -0.04 | 1.97 | -0.07 | 0.12 | 2.18 | - | - | - | -1.78 | -2.49 | - | -2.31 | - | - | - | -0.75 | - | - | - | - | 1.48 | 1.11 | 1.18 | 0.31 | -0.18 | 1.62 | 1.86 | 2.3 | 0.95 | 2.37 | 1.22 | 0.34 | - | - | - | - | - | -4.83 | -1.77 | -0.89 | 0.27 | 0.57 | -1.27 | -2.26 | -1.23 | - | |
| -1.96 | -2.07 | 1.15 | 0.36 | -0.65 | 0.2 | - | 2.41 | -0.73 | -2.33 | 0.89 | 1.64 | 0.57 | 0.18 | 1.84 | -1.17 | - | - | -2.55 | -5.1 | -0.86 | -3.29 | -1.86 | -1.17 | -2.03 | -2.28 | - | - | -4.11 | - | 1.1 | 0.48 | 0.98 | 0.74 | 0.37 | 0.64 | 0.25 | 0.76 | 0.09 | 0.47 | 1.45 | 0.32 | -1.02 | -0.62 | -1.23 | -2.06 | -3.77 | -0.31 | -1.03 | 0.74 | -0.12 | -0.53 | 0.03 | -0.24 | 0.99 | -0.46 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.