View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1.31 | 0.46 | 1.32 | 1.03 | 0.97 | 1.9 | 5.89 | 3.67 | 1.0 | 1.28 | 0.16 | 2.76 | 3.27 | 1.99 | 3.42 | 3.39 | 0.0 | 4.88 | 1.06 | 1.17 | 1.4 | 1.77 | 0.61 | 0.97 | 1.09 | 2.39 | 0.44 | 0.32 | 0.66 | 0.47 | 2.18 | 1.35 | 2.45 | 2.38 | 1.76 | 1.75 | 2.64 | 2.48 | 2.13 | 2.11 | 2.33 | 2.02 | 0.14 | 0.18 | 0.0 | 2.43 | 3.16 | 1.05 | 1.52 | 0.32 | 0.67 | 1.39 | 0.2 | 0.26 | 1.12 | 0.48 | |
0.04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | 0.68 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.74 | 0.72 | 0.48 | 0.41 | 0.0 | 0.0 | 0.08 | 0.78 | 0.09 | 0.22 | 0.36 | 0.17 | 0.37 | 0.39 | 0.54 | 0.66 | 0.42 | 1.02 | 1.18 | 0.5 | 1.75 | 1.3 | 0.57 | 0.3 | 0.0 | 0.0 | 0.0 | 0.55 | 0.91 | 0.77 | 0.71 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | 0.0 | 0.0 | |
4.27 | 17.33 | 8.05 | 12.87 | 7.12 | 12.11 | 20.71 | 13.72 | 7.37 | 10.48 | 3.88 | 8.14 | 10.99 | 6.6 | 8.9 | 10.22 | 0.06 | 33.74 | 16.03 | 3.85 | 16.31 | 8.64 | 7.58 | 1.54 | 1.86 | 16.37 | 2.29 | 2.52 | 1.2 | 1.71 | 10.87 | 11.94 | 11.03 | 14.25 | 12.07 | 8.94 | 11.84 | 11.7 | 16.22 | 14.41 | 9.2 | 9.35 | 15.19 | 16.74 | 11.12 | 16.69 | 13.98 | 12.0 | 12.54 | 4.7 | 2.34 | 2.85 | 4.31 | 4.73 | 3.64 | 5.0 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)