Heatmap: Cluster_3 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00144460 (evm_27.TU.AmTr_v1.0_scaffold00001.125)
- - - - - - - 4.46 - - - - - - - - - - - - - -
AMTR_s00001p00242930 (evm_27.TU.AmTr_v1.0_scaffold00001.281)
0.44 0.66 -0.88 -1.32 1.71 -2.0 -1.07 0.79 -0.85 -0.68 0.42 -0.21 0.22 0.07 -0.06 -0.73 0.31 0.06 -0.44 -0.41 -1.88 0.23
AMTR_s00001p00272600 (evm_27.TU.AmTr_v1.0_scaffold00001.544)
- - - 0.95 1.75 - - 3.4 - - - - -4.71 -4.64 -4.06 - - - - - 2.59 -
AMTR_s00002p00269900 (evm_27.TU.AmTr_v1.0_scaffold00002.563)
- - 2.83 - 0.35 - -1.82 2.9 0.13 -0.93 -1.6 - -0.71 -1.36 0.94 - -2.51 - - -1.89 -1.72 -2.13
AMTR_s00004p00269550 (evm_27.TU.AmTr_v1.0_scaffold00004.286)
- - - - -1.4 - 1.76 3.37 2.03 1.82 - - - -2.34 -3.25 - - - - - - -
AMTR_s00005p00256350 (evm_27.TU.AmTr_v1.0_scaffold00005.176)
- - - - 3.1 - - 3.45 - - - - 1.31 - - - - - - - - -
AMTR_s00006p00268680 (evm_27.TU.AmTr_v1.0_scaffold00006.317)
- - - 1.19 2.48 - -1.18 1.24 -0.07 -0.15 -2.13 -0.35 0.39 -0.6 -0.07 1.41 -0.1 - -1.52 -0.63 - -0.1
AMTR_s00008p00172060 (evm_27.TU.AmTr_v1.0_scaffold00008.92)
- - - - 3.41 - - 3.51 - - - - - - - - - - - - - -
AMTR_s00009p00236890 (evm_27.TU.AmTr_v1.0_scaffold00009.199)
1.18 0.09 -0.56 -0.74 2.3 -0.95 -2.34 1.54 -1.84 -0.21 0.19 0.42 -1.79 -2.24 -2.71 0.21 -2.3 0.38 -0.5 -2.41 -1.53 -0.55
AMTR_s00010p00179130 (evm_27.TU.AmTr_v1.0_scaffold00010.149)
- - - - 0.23 - 0.42 2.55 -0.33 -0.33 - 0.12 0.27 1.08 1.15 -0.44 -2.01 0.93 -0.23 -0.91 -0.22 -1.93
AMTR_s00017p00238420 (evm_27.TU.AmTr_v1.0_scaffold00017.205)
- - - - 0.89 - -0.69 3.9 -0.93 0.89 - 0.73 - -4.3 -1.59 - - - - - - -3.05
AMTR_s00017p00248550 (evm_27.TU.AmTr_v1.0_scaffold00017.244)
- - - - 2.64 - -0.33 1.24 0.64 0.12 - 2.76 - -2.59 1.6 - - - - - - -
AMTR_s00018p00235770 (evm_27.TU.AmTr_v1.0_scaffold00018.147)
- - - - - - - 4.46 - - - - - - - - - - - - - -
AMTR_s00019p00098280 (evm_27.TU.AmTr_v1.0_scaffold00019.72)
- - - - 3.15 - -1.51 1.83 -2.56 -3.34 -0.45 -0.67 0.68 -0.93 0.63 - 0.71 - -2.02 -0.59 -1.01 -0.19
AMTR_s00021p00039780 (evm_27.TU.AmTr_v1.0_scaffold00021.14)
- -1.73 2.72 -1.61 2.3 - -3.23 0.98 -1.19 -1.36 1.23 - -2.08 -1.32 -0.26 - -2.57 0.96 -1.61 -1.77 - -1.33
AMTR_s00021p00179030 (evm_27.TU.AmTr_v1.0_scaffold00021.134)
- - - - 3.35 - - 2.91 - 2.1 - - - - - - - - - - - -
AMTR_s00021p00198880 (evm_27.TU.AmTr_v1.0_scaffold00021.163)
-0.45 -0.14 -0.38 -7.12 2.07 - -4.4 0.18 -2.06 -1.37 0.02 -0.22 0.73 0.43 0.9 -0.5 0.53 -0.02 -0.59 0.04 -1.11 0.63
AMTR_s00023p00127640 (evm_27.TU.AmTr_v1.0_scaffold00023.65)
- - - - 3.23 - -0.07 2.88 -0.84 -1.11 - - -3.01 -2.08 0.02 - 0.28 -0.94 - - - -2.63
AMTR_s00023p00248940 (evm_27.TU.AmTr_v1.0_scaffold00023.232)
1.06 -0.18 0.21 -2.18 2.81 -5.66 -2.7 1.85 -1.59 0.43 0.07 0.95 -2.84 -2.74 -3.07 -1.96 -3.42 -0.68 -1.39 -3.85 -2.04 -2.87
AMTR_s00025p00081620 (evm_27.TU.AmTr_v1.0_scaffold00025.63)
- - - - 3.46 - - 3.46 - - - - - - - - - - - - - -
AMTR_s00026p00110020 (evm_27.TU.AmTr_v1.0_scaffold00026.45)
-1.67 -0.82 -0.3 -1.05 0.78 - - 3.47 - -2.86 -0.64 1.1 -2.54 - -4.19 - 0.7 - - 0.9 - -1.3
AMTR_s00026p00152560 (evm_27.TU.AmTr_v1.0_scaffold00026.76)
- - - -5.44 0.74 - -1.27 2.52 -0.41 -0.88 1.61 1.26 0.46 -0.16 -0.81 -1.11 1.1 -1.74 0.24 -2.24 - -2.04
AMTR_s00028p00139110 (evm_27.TU.AmTr_v1.0_scaffold00028.48)
- - - - 1.46 - - 1.13 1.72 1.48 - 1.72 -1.23 -0.92 1.53 - 0.62 0.52 - -0.87 - -1.63
AMTR_s00034p00151720 (evm_27.TU.AmTr_v1.0_scaffold00034.46)
- - - - -0.75 - -2.6 4.29 -4.01 -3.38 - - - -3.75 0.53 - - - - - - -
AMTR_s00040p00118620 (evm_27.TU.AmTr_v1.0_scaffold00040.87)
- - - - -0.12 - -5.08 3.76 1.3 1.62 - - -2.28 -2.14 -2.06 - - - - -1.87 - 0.1
AMTR_s00041p00212180 (evm_27.TU.AmTr_v1.0_scaffold00041.219)
- - - - -2.4 - -1.64 4.31 -1.25 0.03 - - - - -5.11 - - - - - - -2.91
AMTR_s00041p00215470 (evm_27.TU.AmTr_v1.0_scaffold00041.232)
- - - - 0.68 - - 4.16 - - - - - - -1.23 - - - - - - 1.11
AMTR_s00045p00208770 (evm_27.TU.AmTr_v1.0_scaffold00045.283)
- - - - 0.32 - -3.21 3.97 -2.4 -1.99 -1.04 - -1.11 -2.59 -1.36 - -0.75 - - -1.59 0.93 -2.1
AMTR_s00045p00208800 (evm_27.TU.AmTr_v1.0_scaffold00045.284)
- - - - -0.66 - -4.49 4.19 -4.94 -2.63 - - -4.48 -3.41 -1.02 - - - - -2.69 1.1 -
AMTR_s00046p00133750 (evm_27.TU.AmTr_v1.0_scaffold00046.66)
- - - 1.74 2.59 - - 3.55 -2.86 - - - - - - - -0.67 - - -2.61 - -
AMTR_s00046p00216280 (evm_27.TU.AmTr_v1.0_scaffold00046.144)
-0.55 0.02 - -5.78 2.04 - -0.02 2.77 1.33 1.15 -0.5 -0.87 -1.3 -1.14 -0.66 -3.76 -1.28 - - -3.69 -3.54 -2.16
AMTR_s00048p00152900 (evm_27.TU.AmTr_v1.0_scaffold00048.106)
- - - - 3.34 - -3.12 2.75 -0.68 -0.08 - - -0.13 - 0.63 - - - -0.78 -1.35 - -
AMTR_s00052p00110670 (evm_27.TU.AmTr_v1.0_scaffold00052.35)
- - - - - - - 4.46 - - - - - - - - - - - - - -
AMTR_s00055p00072530 (evm_27.TU.AmTr_v1.0_scaffold00055.28)
- - - - 1.28 - - 3.42 - - - - - - - - - - - - 3.15 -
AMTR_s00065p00170050 (evm_27.TU.AmTr_v1.0_scaffold00065.137)
- - - - 0.01 - - 4.31 -3.54 -1.89 - - -3.06 - -0.66 - - - - - - -
AMTR_s00068p00201940 (evm_27.TU.AmTr_v1.0_scaffold00068.174)
- - 2.78 - 0.73 - - 1.41 -3.43 -4.31 -0.29 -1.07 -0.58 -1.51 -0.12 -0.05 -0.27 -0.26 0.26 -0.57 0.9 0.12
AMTR_s00071p00032040 (evm_27.TU.AmTr_v1.0_scaffold00071.17)
- - - - -0.27 - - 4.0 -5.02 -4.26 -1.62 - -2.96 - 1.41 - -0.24 - - - - 0.15
AMTR_s00082p00113410 (evm_27.TU.AmTr_v1.0_scaffold00082.21)
- - - - 3.46 - - 3.46 - - - - - - - - - - - - - -
AMTR_s00088p00037040 (evm_27.TU.AmTr_v1.0_scaffold00088.17)
-2.75 - - - 0.47 - -0.23 2.46 -0.56 -0.12 0.04 -0.16 0.82 -1.66 -0.51 - 1.81 - -1.42 1.53 -1.51 -0.57
AMTR_s00090p00103720 (evm_27.TU.AmTr_v1.0_scaffold00090.46)
- - - - 2.56 - -0.93 3.28 0.39 -0.57 -0.23 - -1.67 0.12 -0.75 - - - - -0.25 - -2.43
AMTR_s00094p00172970 (evm_27.TU.AmTr_v1.0_scaffold00094.22)
- - 1.47 - 0.95 - - 4.11 - - - - - - - - - - - - - -
AMTR_s00108p00133690 (evm_27.TU.AmTr_v1.0_scaffold00108.38)
- - - - 2.43 - 0.51 2.57 0.56 0.79 - - -0.85 0.78 -0.46 - 0.46 - 0.74 -12.73 - -
AMTR_s00112p00148490 (evm_27.TU.AmTr_v1.0_scaffold00112.41)
- - - -3.74 -0.83 - -4.46 3.34 - -4.39 - - -3.44 - -3.37 - -1.9 - - - 3.42 -
AMTR_s00113p00022880 (evm_27.TU.AmTr_v1.0_scaffold00113.4)
1.09 - 2.74 - 3.04 - -5.86 0.52 -3.77 -0.28 -1.75 -0.01 - -4.81 -2.16 -0.99 - -2.2 -3.18 -4.6 -2.36 -
AMTR_s00113p00023020 (evm_27.TU.AmTr_v1.0_scaffold00113.5)
0.85 - 1.9 - 2.88 - - -4.54 -3.14 0.13 -0.28 2.04 - -3.99 -1.25 -1.1 - 0.85 - -3.73 - -4.14
AMTR_s00117p00083340 (evm_27.TU.AmTr_v1.0_scaffold00117.24)
- - - - -0.06 - - 4.39 - - - - - - -4.32 - - - - - - -
AMTR_s00119p00143060 (evm_27.TU.AmTr_v1.0_scaffold00119.119)
- - - - 3.65 - - 3.24 - - - - - - - - - - - - - -
AMTR_s00138p00063760 (evm_27.TU.AmTr_v1.0_scaffold00138.31)
- - - 2.08 0.59 - -5.16 3.19 -2.65 -3.1 -2.2 0.6 -4.35 -3.8 -1.98 -2.55 - -2.18 -0.48 -4.87 1.84 -4.97
AMTR_s00139p00021480 (evm_27.TU.AmTr_v1.0_scaffold00139.2)
- - - 0.44 -0.15 - - 3.45 - - - - - - - - - - - - 3.14 -
AMTR_s00140p00101200 (evm_27.TU.AmTr_v1.0_scaffold00140.47)
- - -3.98 -4.57 -2.47 - -0.33 3.45 2.06 1.89 - 0.05 -0.53 -3.07 -2.28 - - - - -4.16 - -
AMTR_s00140p00102220 (evm_27.TU.AmTr_v1.0_scaffold00140.48)
-2.82 -1.25 -0.64 -4.06 -1.42 - -0.45 2.82 1.63 1.18 - 2.03 1.03 -1.07 -0.66 - - - - - - -
AMTR_s00142p00080680 (evm_27.TU.AmTr_v1.0_scaffold00142.49)
- -6.97 - -1.19 2.86 - -6.86 2.47 -5.71 -5.19 -0.32 0.49 -1.01 -2.98 -3.12 -4.47 -2.38 -3.1 -2.32 -2.3 2.26 -2.21
AMTR_s00143p00045840 (evm_27.TU.AmTr_v1.0_scaffold00143.8)
- - - -4.36 2.53 1.83 -4.08 3.57 - - -2.3 - -3.09 -5.41 - - - - -1.69 - - -
AMTR_s00143p00052740 (evm_27.TU.AmTr_v1.0_scaffold00143.10)
- - - 2.23 3.5 - - 2.55 - - - - -3.56 - - - - - - - - -
AMTR_s00149p00016080 (evm_27.TU.AmTr_v1.0_scaffold00149.1)
- - - - 2.88 2.71 0.2 2.04 -0.93 - - -16.49 -2.68 -1.25 0.8 - - - - - - -
AMTR_s00163p00047920 (evm_27.TU.AmTr_v1.0_scaffold00163.13)
- - - - 3.87 - - 2.41 - - - - - - 1.07 - - - - - - -
AMTR_s00166p00058450 (evm_27.TU.AmTr_v1.0_scaffold00166.34)
- - - -0.09 1.09 0.86 0.01 2.25 -1.37 -1.07 0.64 0.73 -1.49 -2.0 -2.09 -0.57 -0.47 -0.2 -0.81 -2.08 1.64 -2.15
AMTR_s00170p00026150 (evm_27.TU.AmTr_v1.0_scaffold00170.7)
- - - - 2.37 - - 4.07 - - - - - - - - - - - - - -
AMTR_s00181p00012950 (evm_27.TU.AmTr_v1.0_scaffold00181.3)
- -2.25 3.07 - 0.16 -0.63 1.34 2.16 -0.96 1.18 - - -2.91 -0.44 -0.15 - - - - -7.67 - -4.67
AMTR_s00183p00016820 (evm_27.TU.AmTr_v1.0_scaffold00183.1)
- - - -0.27 0.34 1.45 -0.46 2.22 1.09 0.47 -1.91 -2.13 -1.06 -1.08 -2.0 -0.69 -1.32 -0.32 -1.9 0.39 1.43 -1.09
AMTR_s00192p00024420 (evm_27.TU.AmTr_v1.0_scaffold00192.2)
-0.64 0.03 -1.94 -0.96 2.18 - -4.16 2.61 -5.84 -5.76 -1.99 -3.01 -1.82 -0.1 1.83 -1.99 -0.21 -2.2 -3.27 0.68 -1.03 -2.5
AMTR_s00334p00008040 (evm_27.TU.AmTr_v1.0_scaffold00334.1)
- - - - 2.06 - - 4.16 - - - - - - - - - - - - - -
AMTR_s01945p00002530 (evm_27.TU.AmTr_v1.0_scaffold01945.1)
2.2 - - -0.83 3.02 - - 2.56 - - - - -6.43 - -4.2 - - - - - 1.45 -
AMTR_s01945p00007750 (evm_27.TU.AmTr_v1.0_scaffold01945.2)
- - - 1.05 2.9 - - 2.89 -5.63 -4.08 - - -5.75 -5.97 -4.46 - -3.0 - - - 2.25 -
AMTR_s02898p00003070 (evm_27.TU.AmTr_v1.0_scaffold02898.1)
- - - - 3.66 - - 3.23 - - - - - - - - - - - - - -
AMTR_s03399p00004430 (evm_27.TU.AmTr_v1.0_scaffold03399.2)
- - - -0.39 -2.58 - - 3.67 - - -2.8 - -6.57 -5.46 -4.64 - - - - - 3.02 -
AMTR_s04164p00005780 (evm_27.TU.AmTr_v1.0_scaffold04164.1)
- - - 1.96 0.83 -7.57 2.14 2.65 0.86 0.34 -10.86 -0.65 -3.94 -0.68 0.32 - - - - - - -
AMTR_s05520p00003140 (evm_27.TU.AmTr_v1.0_scaffold05520.1)
- - - -0.68 -0.67 - - 3.92 -5.36 - - - -6.14 -6.71 -6.93 - - - - - 2.48 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.