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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4.22 | 3.41 | -1.28 | -2.87 | -2.13 | - | - | 3.32 | 0.48 | -3.27 | - | - | - | - | -3.52 | - | - | - | -5.33 | - | 0.29 | -2.31 | - | - | - | -2.11 | - | - | - | -2.45 | -3.56 | -2.44 | -3.33 | -3.17 | - | - | -1.8 | -1.9 | - | -1.19 | - | -3.27 | -0.69 | -0.13 | 1.42 | - | 0.79 | 1.25 | 1.33 | - | - | - | - | - | -3.29 | - | |
| 3.58 | - | - | -0.52 | - | - | - | 2.9 | 0.63 | -1.38 | - | -1.1 | 0.49 | - | -2.49 | - | - | - | -1.68 | 0.78 | 2.53 | -2.33 | 3.11 | - | -1.45 | -1.38 | -1.29 | -1.39 | -0.53 | -0.43 | -2.5 | - | -1.22 | - | -0.39 | - | -2.3 | -2.54 | -2.09 | - | - | -1.39 | -0.09 | -1.08 | 0.35 | - | 1.39 | 0.45 | 1.17 | - | -2.44 | -0.71 | - | -2.47 | - | - | |
| 3.97 | 3.63 | - | - | - | - | - | 3.3 | 0.09 | - | - | - | - | - | -0.55 | - | - | - | -1.08 | - | 1.26 | -1.34 | - | - | - | -5.83 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.3 | -0.99 | - | 0.09 | -0.63 | 1.2 | -0.19 | - | 1.4 | 1.41 | - | -1.5 | - | - | - | -0.27 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.