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View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3.07 | 11.31 | 3.99 | 8.2 | 3.68 | 7.31 | 2.7 | 10.29 | 10.4 | 5.24 | 3.79 | 7.26 | 6.7 | 6.13 | 7.2 | 1.71 | 0.0 | 3.91 | 4.59 | 4.19 | 6.18 | 5.27 | 6.86 | 8.41 | 4.44 | 5.74 | 3.47 | 3.08 | 2.45 | 3.22 | 8.39 | 7.0 | 6.66 | 6.93 | 7.09 | 7.48 | 7.92 | 8.34 | 7.51 | 8.67 | 9.1 | 5.47 | 2.43 | 1.74 | 2.62 | 4.25 | 7.28 | 6.51 | 6.82 | 3.7 | 3.88 | 2.97 | 2.99 | 2.51 | 4.08 | 2.25 | |
| 77.05 | 250.0 | 41.44 | 33.51 | 38.07 | 36.05 | 16.68 | 166.93 | 166.82 | 124.08 | 115.57 | 116.19 | 214.75 | 112.74 | 111.86 | 15.25 | 0.0 | 41.47 | 80.69 | 90.96 | 151.54 | 67.2 | 101.21 | 107.64 | 119.68 | 89.59 | 123.85 | 108.57 | 109.85 | 106.27 | 136.23 | 133.48 | 152.07 | 200.22 | 183.58 | 177.7 | 162.06 | 225.06 | 175.64 | 160.93 | 135.52 | 122.15 | 46.75 | 31.31 | 17.33 | 149.3 | 166.63 | 91.27 | 96.93 | 80.85 | 58.84 | 68.16 | 64.29 | 85.88 | 65.2 | 72.31 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)