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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.5 | 0.79 | -3.28 | -1.63 | -2.42 | -6.96 | -3.3 | -0.24 | -1.0 | -0.64 | -2.56 | -2.53 | -0.91 | -2.35 | -1.71 | -1.06 | - | -2.53 | -0.78 | 0.6 | 0.39 | 0.63 | 0.28 | -0.3 | -0.14 | 0.37 | 0.2 | 0.73 | -0.35 | 0.73 | 0.26 | 0.14 | -0.05 | -0.14 | -0.06 | 0.28 | 0.31 | 0.12 | 0.02 | 0.1 | 0.37 | -0.49 | 0.79 | 0.46 | 1.19 | 0.35 | 0.81 | -0.03 | 0.08 | 0.24 | 0.28 | 0.9 | 0.32 | 0.07 | 0.84 | 1.07 | |
| 0.17 | 0.08 | -0.88 | 0.12 | -0.79 | -1.68 | -2.6 | 0.34 | -0.4 | -0.63 | -1.07 | -1.08 | -0.3 | -0.03 | -1.11 | -0.76 | - | -0.53 | -1.04 | -0.15 | 0.34 | 0.29 | 0.11 | -0.26 | -0.11 | 0.42 | 0.31 | -0.06 | -0.45 | 0.05 | 0.21 | -0.19 | -0.05 | -0.26 | -0.38 | -0.31 | -0.48 | -0.06 | -0.09 | -0.05 | 0.41 | -0.85 | 0.22 | 0.15 | 1.23 | 0.53 | 0.06 | 0.08 | 0.1 | 0.47 | 0.8 | 1.03 | 0.54 | 0.2 | 0.76 | 1.25 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.