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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -3.18 | -0.08 | -0.8 | 0.91 | -2.87 | -1.26 | 0.09 | 1.45 | 0.66 | -1.36 | -2.23 | 0.59 | 0.38 | 0.52 | 1.19 | -0.48 | - | 0.75 | -0.72 | -0.67 | 0.01 | -3.24 | 0.81 | -1.71 | 0.19 | -1.51 | 0.32 | 0.62 | 0.31 | 0.41 | -0.43 | -0.37 | -0.25 | 0.14 | 0.37 | 0.13 | 0.36 | 0.14 | 0.03 | -0.43 | -0.41 | -0.03 | -0.26 | -1.67 | -0.04 | -0.26 | -2.53 | -0.43 | -0.47 | -0.43 | 0.68 | 0.77 | -0.45 | -0.36 | 0.28 | 1.44 | |
| -2.56 | -0.5 | - | -2.06 | -4.98 | -3.95 | -2.16 | 1.31 | 0.15 | 0.49 | - | 1.03 | 0.91 | 0.11 | 1.53 | -6.36 | - | -4.23 | 0.84 | -2.1 | 0.03 | -3.28 | 0.96 | -2.17 | -0.03 | -1.2 | -0.67 | 0.59 | 0.31 | 0.28 | -0.61 | -0.33 | -0.16 | 0.06 | 0.31 | 0.28 | 0.4 | 0.38 | 0.11 | -0.21 | -0.17 | 0.02 | 0.18 | -0.85 | 0.37 | -0.15 | -2.8 | -0.02 | -0.15 | -0.13 | 0.72 | 1.13 | -0.04 | -0.29 | 0.53 | 2.04 | |
| 0.94 | -0.98 | - | -3.01 | -2.66 | - | - | 1.04 | -2.16 | 0.93 | - | -0.25 | 0.63 | -0.42 | -0.39 | -1.07 | - | - | 0.11 | -0.84 | 1.08 | 0.67 | 1.81 | 0.01 | 1.04 | -0.41 | 0.59 | -0.48 | 0.74 | 0.35 | -0.1 | -0.16 | 0.55 | -0.25 | -1.05 | -0.4 | -0.51 | -0.4 | -0.39 | -1.07 | 0.05 | -0.42 | 1.22 | -0.33 | 2.16 | 0.44 | 1.15 | -0.2 | 0.91 | -4.71 | -3.08 | -1.55 | -2.83 | -3.34 | -1.51 | 1.04 | |
| -0.67 | 1.0 | -2.05 | -1.18 | -2.81 | -2.66 | -2.2 | 1.12 | -0.16 | 0.92 | -1.51 | -0.24 | 1.53 | 0.28 | 0.07 | -2.46 | 1.42 | -1.33 | 0.92 | -3.07 | 0.68 | -2.22 | -0.24 | -1.34 | -2.6 | -1.48 | -2.93 | -3.05 | -3.19 | -3.23 | 0.1 | 0.14 | 0.27 | 0.36 | 0.3 | 0.15 | 0.17 | 0.35 | 0.23 | 0.52 | 0.17 | -0.11 | 0.97 | -0.08 | -0.26 | 0.69 | -0.91 | -0.04 | -0.23 | -0.44 | -0.01 | 0.58 | -0.34 | -0.2 | 0.62 | 1.74 | |
| 0.31 | -1.19 | -3.11 | 0.09 | -2.36 | -4.66 | - | 1.73 | -1.3 | 1.13 | -1.67 | 0.28 | 1.83 | 0.75 | 0.62 | -4.38 | - | -2.44 | 0.5 | -0.81 | 0.64 | 0.31 | 0.77 | -1.5 | -0.72 | -0.64 | -1.29 | -0.07 | -0.86 | -0.67 | 0.6 | 0.32 | 0.13 | -0.13 | -0.09 | -0.11 | 0.41 | 0.44 | -0.26 | -0.46 | 0.27 | -0.6 | 0.76 | 0.11 | 1.56 | 0.2 | 0.2 | -1.01 | 0.03 | -2.33 | -3.0 | -0.96 | -1.82 | -3.43 | -0.52 | 1.86 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.