- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.29 | -0.3 | - | -2.63 | - | - | - | -0.67 | -0.15 | -1.4 | - | -3.5 | -0.71 | - | -7.49 | - | - | - | -1.97 | 1.87 | 0.13 | -0.03 | -0.75 | -1.21 | 1.72 | 0.67 | 3.07 | 1.67 | 2.22 | 1.92 | 0.47 | -1.36 | -0.33 | -0.43 | -0.99 | -0.08 | -2.6 | -0.22 | -0.6 | -0.8 | 0.07 | -0.64 | -1.08 | -2.84 | -0.61 | - | 1.06 | -0.85 | -0.97 | -1.12 | 0.53 | 0.77 | -0.34 | -0.27 | 0.2 | -2.48 | |
| -3.32 | -1.85 | -2.21 | -0.6 | -3.87 | -2.12 | -0.24 | 0.57 | -1.13 | -3.22 | - | -4.04 | - | - | -3.44 | -0.37 | - | - | -3.08 | 1.95 | 0.48 | 1.05 | -2.23 | -0.76 | 1.46 | 0.54 | 1.77 | 2.54 | 2.5 | 1.75 | -0.93 | -4.26 | -1.43 | -2.92 | -1.2 | -1.26 | -1.62 | -1.51 | -0.86 | -1.86 | -1.37 | -2.61 | -0.8 | -1.68 | -0.12 | -0.7 | 1.32 | 0.03 | 0.35 | -0.22 | 0.72 | 0.58 | 0.11 | 0.15 | 1.02 | -1.02 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.