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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.52 | 1.29 | -1.56 | -1.25 | -1.08 | 1.33 | -2.77 | -1.01 | -0.53 | -4.64 | 2.65 | 0.51 | 0.69 | 1.28 | -0.69 | -1.85 | - | -1.29 | -4.42 | 0.69 | -0.72 | -0.33 | -0.09 | 0.78 | 1.01 | -0.55 | 1.31 | 0.82 | 1.18 | 1.08 | -0.14 | -0.26 | -0.15 | 0.1 | -0.09 | -0.15 | -0.45 | -0.27 | -0.11 | -0.21 | -0.4 | -0.6 | -1.37 | -1.15 | -1.09 | -0.52 | -0.29 | -1.43 | -1.47 | -0.73 | -0.36 | -0.49 | -0.71 | -0.79 | -0.34 | -3.89 | |
| - | - | -3.4 | - | 0.54 | 2.24 | - | -1.55 | -1.15 | -1.75 | 3.27 | 1.17 | 1.35 | 2.42 | 0.56 | - | - | - | -3.35 | -0.31 | -1.41 | -2.47 | - | 0.08 | 0.44 | -1.83 | 0.58 | -0.94 | -0.83 | 0.03 | 0.05 | 0.01 | 0.23 | 0.47 | -0.93 | -0.96 | 0.37 | -0.3 | -0.22 | -0.11 | 0.3 | -0.59 | 0.67 | -1.17 | - | -2.76 | -1.0 | -0.05 | -0.26 | -1.07 | -1.67 | -0.62 | -0.18 | 0.05 | -1.56 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.