Heatmap: Cluster_15 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00261550 (evm_27.TU.AmTr_v1.0_scaffold00001.380)
- - - - 1.35 - -1.35 - 0.66 -0.68 - - 1.0 -2.69 0.95 1.66 2.09 - - -1.85 1.88 0.48
AMTR_s00001p00272320 (evm_27.TU.AmTr_v1.0_scaffold00001.516)
- - - - 3.14 - - - - - - - -0.67 -0.61 1.27 - 3.01 - - 0.56 - -
AMTR_s00002p00239340 (evm_27.TU.AmTr_v1.0_scaffold00002.293)
- - - - - - - - - - - - - - - - 4.46 - - - - -
AMTR_s00003p00089590 (evm_27.TU.AmTr_v1.0_scaffold00003.53)
-1.17 -1.88 -1.71 -3.17 -2.03 - -2.53 -4.34 -1.66 -1.75 0.78 0.5 0.3 0.11 -0.08 0.19 2.31 1.31 -0.43 0.19 0.67 0.42
AMTR_s00004p00044490 (evm_27.TU.AmTr_v1.0_scaffold00004.26)
- - - - 0.3 - - - - - - - - - 1.49 - 4.17 - - - - -
AMTR_s00004p00239990 (evm_27.TU.AmTr_v1.0_scaffold00004.232)
- - - - 1.2 - - - - - - - - - - - 3.69 - - - - 2.77
AMTR_s00005p00081400 (evm_27.TU.AmTr_v1.0_scaffold00005.16)
- - - - - - - - - - - - - - - - 4.46 - - - - -
AMTR_s00006p00252380 (evm_27.TU.AmTr_v1.0_scaffold00006.161)
- - - - 3.24 - -1.28 - - 0.13 - - - - -0.43 - 3.31 - - - - -1.5
AMTR_s00007p00264040 (evm_27.TU.AmTr_v1.0_scaffold00007.344)
- - - - 3.26 - - - - -0.43 - - - 0.9 -0.11 - 2.29 - - 1.99 - -
AMTR_s00009p00126120 (evm_27.TU.AmTr_v1.0_scaffold00009.68)
- - - - -0.83 - - - - - 1.23 0.65 -0.81 - -5.72 0.08 2.7 1.46 -0.52 -0.02 1.89 0.32
AMTR_s00009p00235690 (evm_27.TU.AmTr_v1.0_scaffold00009.194)
- - - - 2.89 - - - - - - - - - 2.29 - 3.28 - - - - -
AMTR_s00009p00263060 (evm_27.TU.AmTr_v1.0_scaffold00009.353)
- - - 0.27 3.22 - - - -2.97 - - 1.54 -0.28 -3.26 -0.55 - 2.77 - - - - -
AMTR_s00014p00075490 (evm_27.TU.AmTr_v1.0_scaffold00014.22)
-0.66 -0.14 0.11 - 1.04 - 0.34 -3.56 -0.59 -0.72 -0.18 -0.13 0.5 -0.04 -0.37 0.53 1.8 0.09 -0.13 0.31 -1.07 0.17
AMTR_s00016p00260260 (evm_27.TU.AmTr_v1.0_scaffold00016.378)
- - - - 2.67 - 0.55 - -1.08 -1.03 - - -0.88 0.6 -0.54 - 2.99 - - - - 1.32
AMTR_s00019p00244640 (evm_27.TU.AmTr_v1.0_scaffold00019.371)
- - - - -0.13 - - - - -2.97 0.72 - - - -0.05 - 3.41 1.27 0.29 - - 2.01
AMTR_s00030p00169600 (evm_27.TU.AmTr_v1.0_scaffold00030.104)
- - - - - - - - - - - - - - - - 4.46 - - - - -
AMTR_s00046p00093070 (evm_27.TU.AmTr_v1.0_scaffold00046.50)
- - 3.46 - 1.2 - -3.03 - -1.6 -3.16 - - 0.61 - -0.26 - 2.28 - - -1.4 - -0.83
AMTR_s00046p00198450 (evm_27.TU.AmTr_v1.0_scaffold00046.125)
- - - - 2.93 - 0.35 - -1.33 -1.27 - - -0.22 - -0.17 - 3.07 - - - - 1.12
AMTR_s00050p00213390 (evm_27.TU.AmTr_v1.0_scaffold00050.74)
- - - - 2.12 - - - - - - - - - - - 4.14 - - - - -
AMTR_s00051p00205220 (evm_27.TU.AmTr_v1.0_scaffold00051.85)
- - - - - - - - - - - - 1.41 - 1.11 - 4.1 - - - - -
- -1.33 -0.26 - -0.65 - - - -1.45 -0.48 1.72 - -4.08 -15.13 - - 3.97 - - - - -
AMTR_s00053p00145300 (evm_27.TU.AmTr_v1.0_scaffold00053.92)
- - - - 1.67 - - - - - - - 0.19 - -0.11 - 4.07 - - - - -
AMTR_s00056p00016650 (evm_27.TU.AmTr_v1.0_scaffold00056.1)
- - - - -6.29 - - - - - 0.89 0.54 -2.71 -5.64 -4.56 -4.74 3.08 1.22 1.61 -0.53 -2.53 1.89
AMTR_s00057p00078460 (evm_27.TU.AmTr_v1.0_scaffold00057.49)
- - - - 1.97 - -0.97 - 1.86 -0.13 - - 1.11 -2.13 1.38 - 2.32 - - 0.03 - 1.03
AMTR_s00060p00070950 (evm_27.TU.AmTr_v1.0_scaffold00060.20)
- - - - - - - - - - - - -0.22 0.2 - - 3.6 - 2.98 - - -
AMTR_s00064p00128570 (evm_27.TU.AmTr_v1.0_scaffold00064.48)
- - - - -1.06 - - - - - - - -1.03 - -2.58 - 4.23 - - - - 1.07
AMTR_s00065p00162050 (evm_27.TU.AmTr_v1.0_scaffold00065.121)
- - - - - - - - - - 0.75 - 0.57 - - - 3.35 - - - - 3.11
AMTR_s00066p00166820 (evm_27.TU.AmTr_v1.0_scaffold00066.189)
- - - - 0.06 - - - -2.19 -2.47 1.73 - 0.35 -4.38 0.26 - 3.12 - -0.27 -1.13 - 2.24
AMTR_s00068p00158640 (evm_27.TU.AmTr_v1.0_scaffold00068.110)
0.5 0.19 0.21 -0.7 -7.06 - - - -9.37 - 1.55 1.48 -0.49 -7.46 -7.23 - 3.4 -0.58 - -8.14 - -
AMTR_s00070p00059720 (evm_27.TU.AmTr_v1.0_scaffold00070.26)
- - - - 2.46 - -0.95 - -0.17 0.11 - 2.23 -2.49 - -2.64 - 2.94 - - - - 0.37
AMTR_s00070p00074560 (evm_27.TU.AmTr_v1.0_scaffold00070.33)
- - - - -1.95 - - - -4.43 -3.7 - - -0.63 -2.63 -0.23 - 3.62 - - -0.65 2.36 0.94
AMTR_s00072p00038970 (evm_27.TU.AmTr_v1.0_scaffold00072.9)
- - - - 1.95 - - - - - - - -0.09 -0.81 0.91 - 3.73 - - - - 0.53
AMTR_s00073p00065320 (evm_27.TU.AmTr_v1.0_scaffold00073.18)
- - - - - - - - - - - - 0.04 - - - 4.28 - - 0.66 - -
AMTR_s00077p00076630 (evm_27.TU.AmTr_v1.0_scaffold00077.55)
- - - -3.0 2.59 - -2.32 - -3.21 -2.32 0.33 0.5 -0.49 -0.26 0.39 - 2.45 - - - -0.84 1.92
AMTR_s00079p00066130 (evm_27.TU.AmTr_v1.0_scaffold00079.22)
- - - - 1.7 - -0.18 -0.61 2.06 0.22 - - 2.02 - -1.53 - 2.21 - - - - 1.5
AMTR_s00080p00053660 (evm_27.TU.AmTr_v1.0_scaffold00080.15)
- - - - 1.96 - - - - - - - - - - - 4.18 - - - - -
AMTR_s00080p00164230 (evm_27.TU.AmTr_v1.0_scaffold00080.83)
- - - - - - - - 0.06 - - - - - - - 4.39 - - - - -
AMTR_s00085p00046440 (evm_27.TU.AmTr_v1.0_scaffold00085.19)
- - - -0.04 2.37 - - - - -1.69 0.92 - 0.31 -1.35 2.42 - 2.25 - - 0.23 - -0.37
AMTR_s00087p00131480 (evm_27.TU.AmTr_v1.0_scaffold00087.39)
- - - - 2.92 - - - -1.38 - 1.73 - - -1.47 0.84 - 2.96 - - - - -0.34
AMTR_s00089p00170350 (evm_27.TU.AmTr_v1.0_scaffold00089.100)
- - - - 2.35 - - - - - - - 2.44 -0.74 - - 2.08 - - - - 2.74
AMTR_s00095p00153570 (evm_27.TU.AmTr_v1.0_scaffold00095.129)
- - - - 1.8 - - - 0.12 1.1 - - - - 2.14 - 3.44 - - - - -
AMTR_s00105p00100250 (evm_27.TU.AmTr_v1.0_scaffold00105.53)
- - - - 0.57 - - - - - - - -0.02 - 0.26 - 4.2 - - - - -
AMTR_s00108p00101480 (evm_27.TU.AmTr_v1.0_scaffold00108.18)
- - - - 2.56 - 0.04 -2.86 -0.01 -0.44 - - -0.09 -0.65 1.14 - 2.26 - - -2.53 - 2.17
AMTR_s00113p00002460 (evm_27.TU.AmTr_v1.0_scaffold00113.1)
- - - - 2.32 - -1.08 - 0.31 0.78 - - -0.79 - -2.52 - 2.96 - 2.34 - - -
AMTR_s00115p00145700 (evm_27.TU.AmTr_v1.0_scaffold00115.23)
- - - - 3.15 - - 1.15 - - - - 1.04 - -1.27 - 2.74 - - 0.81 - -
AMTR_s00122p00105310 (evm_27.TU.AmTr_v1.0_scaffold00122.46)
- - - - 3.0 - - - - - - - - - - - 3.81 - - - - -
AMTR_s00130p00078370 (evm_27.TU.AmTr_v1.0_scaffold00130.35)
- - - - 2.18 - 2.12 - 0.89 -0.36 - - -0.66 -1.89 -1.97 - 2.13 - 1.91 - - 0.3
AMTR_s00136p00044100 (evm_27.TU.AmTr_v1.0_scaffold00136.12)
-1.44 - - -0.53 - - 0.51 - 1.18 0.97 0.78 - - -1.56 -2.51 - 3.19 - 1.35 - - 0.45
AMTR_s00136p00102900 (evm_27.TU.AmTr_v1.0_scaffold00136.57)
- - - - 2.7 - - - - - - - - - - - 3.96 - - - - -
AMTR_s00139p00027000 (evm_27.TU.AmTr_v1.0_scaffold00139.3)
- - - - 2.37 - - - 2.64 -0.66 - - -0.8 - - - 3.24 - - - - -
AMTR_s00141p00080740 (evm_27.TU.AmTr_v1.0_scaffold00141.24)
- - - - 0.8 - - - - - - - - - - - 3.71 - - -0.51 2.69 -
AMTR_s00146p00066990 (evm_27.TU.AmTr_v1.0_scaffold00146.39)
- - - -2.02 0.05 - -4.05 - -2.27 -3.04 1.43 1.85 -0.32 -6.27 -1.15 - 3.45 - - -3.53 - 0.81
AMTR_s00154p00094940 (evm_27.TU.AmTr_v1.0_scaffold00154.64)
- - - - 2.71 - - - - - - - - - - - 3.95 - - - - -
AMTR_s00161p00083350 (evm_27.TU.AmTr_v1.0_scaffold00161.33)
- - - - 1.73 - -0.37 - 2.63 1.77 - - -1.87 -0.24 -0.32 - 2.59 - - -1.5 - -
AMTR_s00167p00031510 (evm_27.TU.AmTr_v1.0_scaffold00167.13)
- - 0.51 0.49 -1.26 - - - - - - - 0.35 -0.37 0.58 - 3.27 - - 1.6 - 1.34
AMTR_s00204p00035590 (evm_27.TU.AmTr_v1.0_scaffold00204.11)
0.12 -0.88 -0.63 -0.92 2.72 -2.94 -5.57 - -6.62 -6.93 -1.87 0.82 -2.84 -0.52 -0.26 - 1.87 0.45 1.26 -1.73 -2.8 -0.22
AMTR_s00315p00010180 (evm_27.TU.AmTr_v1.0_scaffold00315.1)
- - - - - - - - - - -0.89 -0.13 - - - 1.89 3.51 -0.32 -1.3 - 2.1 -
AMTR_s00355p00015840 (evm_27.TU.AmTr_v1.0_scaffold00355.1)
- - - - 0.92 - - - - - - - - - - - 4.33 - - - - -
AMTR_s01490p00005490 (evm_27.TU.AmTr_v1.0_scaffold01490.1)
- - - - 2.22 - -1.57 - - -2.81 0.26 2.13 -2.0 - - - 2.61 - - 1.23 - 1.38
- - 0.2 - 2.13 - -0.05 - -1.05 -0.11 - - -0.73 - -2.01 - 3.12 - 2.19 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.