Heatmap: Cluster_103 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00270780 (evm_27.TU.AmTr_v1.0_scaffold00003.442)
- - - - 3.66 - -0.69 - - - - - - -1.25 0.62 - - - 2.76 - - -
AMTR_s00008p00038810 (evm_27.TU.AmTr_v1.0_scaffold00008.12)
- - - - 3.15 - - - - - - - 0.33 - - - - - 3.57 - - -
AMTR_s00009p00259100 (evm_27.TU.AmTr_v1.0_scaffold00009.306)
0.24 -0.72 -2.36 -2.97 0.14 -2.65 -1.61 -3.36 -2.1 -2.26 0.34 0.86 -0.92 -0.73 -0.34 1.78 0.37 0.91 2.09 -0.3 -0.93 -0.87
AMTR_s00016p00137020 (evm_27.TU.AmTr_v1.0_scaffold00016.95)
- - - - 2.98 - - - -0.43 - - - - - -0.26 - - - 3.57 - - -0.5
AMTR_s00016p00254530 (evm_27.TU.AmTr_v1.0_scaffold00016.324)
- - - - -3.47 - -5.97 - - - -0.88 1.82 -1.12 -1.63 0.02 1.46 - 0.39 2.76 -0.21 1.77 -0.12
AMTR_s00017p00238490 (evm_27.TU.AmTr_v1.0_scaffold00017.206)
- - - - -2.04 - -4.32 - -3.53 -5.0 -1.92 - -5.3 - -2.07 3.07 - 0.63 3.42 -1.37 - -
AMTR_s00017p00255710 (evm_27.TU.AmTr_v1.0_scaffold00017.278)
- - - 0.42 -3.61 - - - - - -0.22 -0.13 -0.05 -0.58 -1.12 0.3 -0.5 2.09 2.45 -0.29 2.02 -2.55
AMTR_s00018p00204090 (evm_27.TU.AmTr_v1.0_scaffold00018.124)
0.91 0.06 0.3 0.52 1.8 -0.92 -3.4 -4.58 -4.02 -3.77 -1.01 0.91 0.82 -0.85 -0.34 -0.04 -2.15 -0.06 1.43 -0.75 -0.72 -0.78
AMTR_s00019p00048020 (evm_27.TU.AmTr_v1.0_scaffold00019.25)
- - - 1.58 3.53 - - - -1.89 -2.24 - - -1.41 -1.29 0.2 - - - 2.34 - - -
AMTR_s00019p00068350 (evm_27.TU.AmTr_v1.0_scaffold00019.46)
- - - - 2.71 - -1.21 - -1.57 -1.59 0.17 0.94 -1.32 -1.37 0.37 - - 0.74 2.79 -0.72 - -
AMTR_s00021p00203530 (evm_27.TU.AmTr_v1.0_scaffold00021.170)
- - - -2.54 1.48 - -1.26 -1.7 0.33 -0.23 1.37 0.19 0.15 -0.85 0.91 -0.37 -1.95 1.0 1.42 -0.59 0.84 -0.37
AMTR_s00023p00249580 (evm_27.TU.AmTr_v1.0_scaffold00023.234)
- -1.32 - - -0.39 - -2.28 - - -3.71 - - 0.24 - - - - 2.39 3.23 - 2.24 -
AMTR_s00024p00198920 (evm_27.TU.AmTr_v1.0_scaffold00024.172)
- - - - 2.81 - - - - - 1.41 3.15 - - - - - - 1.8 - - -
AMTR_s00030p00114790 (evm_27.TU.AmTr_v1.0_scaffold00030.60)
- - - - - - - - - - -3.03 - -2.02 -2.69 -5.29 -1.23 -4.23 0.73 3.11 1.18 3.07 -
AMTR_s00030p00136630 (evm_27.TU.AmTr_v1.0_scaffold00030.86)
- - - - - - 0.7 - -0.09 - - - - 2.07 - - - - 3.93 - - -
AMTR_s00035p00097280 (evm_27.TU.AmTr_v1.0_scaffold00035.15)
- - - - 0.44 - - - - - - - - 0.91 - - - - 3.82 2.2 - -
- - - - 0.58 - -1.91 - -3.27 -1.32 -0.91 -0.03 1.14 -1.98 1.45 0.4 1.09 -0.23 2.07 0.25 1.2 0.08
AMTR_s00041p00216180 (evm_27.TU.AmTr_v1.0_scaffold00041.234)
- - - - 0.87 - - - 2.41 - - - - - -0.29 - - - 3.52 - - 1.37
AMTR_s00042p00080860 (evm_27.TU.AmTr_v1.0_scaffold00042.17)
- - -0.17 -6.76 -8.3 -5.68 - - -9.31 -8.45 -2.92 -0.26 -0.96 -2.71 -4.08 2.3 -3.31 0.85 3.22 0.72 0.1 -0.89
AMTR_s00042p00174850 (evm_27.TU.AmTr_v1.0_scaffold00042.46)
- - - -1.6 -4.31 - - - - - -0.68 1.25 -3.56 - -7.52 0.69 - 1.97 3.7 - - -
AMTR_s00046p00029020 (evm_27.TU.AmTr_v1.0_scaffold00046.7)
- - - - 2.18 - -2.96 - -2.69 -3.03 - - 0.83 -0.32 -0.26 1.92 - - 1.71 1.44 1.13 0.76
AMTR_s00049p00216130 (evm_27.TU.AmTr_v1.0_scaffold00049.249)
- - - -7.06 -3.59 - -9.21 - -6.07 -7.6 -0.35 -0.58 -1.03 -1.07 -1.64 -0.36 -0.97 1.85 3.02 0.7 1.9 -0.37
AMTR_s00056p00200810 (evm_27.TU.AmTr_v1.0_scaffold00056.182)
- - - - 2.07 - - - - - - - 2.46 1.35 -0.38 2.11 - - 1.32 0.78 - -1.14
AMTR_s00061p00180340 (evm_27.TU.AmTr_v1.0_scaffold00061.196)
- - - - - - - - - - - - - - - - - 2.55 3.97 - - -1.13
AMTR_s00066p00045830 (evm_27.TU.AmTr_v1.0_scaffold00066.22)
0.5 - - - -2.04 - -6.99 -1.97 -6.75 -7.98 1.74 1.73 -0.13 -2.94 -2.15 -4.15 -2.89 1.51 2.72 -0.83 0.92 -5.37
AMTR_s00068p00097220 (evm_27.TU.AmTr_v1.0_scaffold00068.48)
-7.87 - -5.94 -2.01 -2.74 -5.39 0.92 -2.48 0.49 0.77 -0.47 0.83 -1.82 -0.96 -1.91 -6.07 -3.45 1.55 3.02 -0.99 0.02 -2.84
AMTR_s00072p00066840 (evm_27.TU.AmTr_v1.0_scaffold00072.28)
- - - - - - - - - - - - -0.13 - - 2.91 - - 3.76 - - -
AMTR_s00072p00188730 (evm_27.TU.AmTr_v1.0_scaffold00072.134)
- - - - 2.51 - - - -2.07 - 0.67 2.42 - - - - - - 3.06 -1.42 - -1.35
AMTR_s00074p00150570 (evm_27.TU.AmTr_v1.0_scaffold00074.61)
- - - - -0.8 - -1.14 - 0.91 -0.98 - - -0.32 - - - - - 3.37 2.64 - 0.31
AMTR_s00081p00145720 (evm_27.TU.AmTr_v1.0_scaffold00081.56)
- 1.89 - - -4.18 - - - - - -2.99 -2.72 -3.16 -8.27 -7.2 -0.04 -1.63 1.92 2.62 0.52 2.08 -0.08
AMTR_s00092p00092410 (evm_27.TU.AmTr_v1.0_scaffold00092.52)
- - - - -1.33 - -3.43 - -4.05 -4.18 -4.18 -1.35 -3.63 -5.54 -2.13 -3.92 -2.41 0.91 3.6 1.06 -0.24 1.76
AMTR_s00095p00141320 (evm_27.TU.AmTr_v1.0_scaffold00095.103)
- - - -1.34 2.72 - -1.66 - -1.89 -2.9 -1.94 - -3.41 0.62 1.38 - -1.12 - 2.58 1.35 - -0.37
AMTR_s00096p00118600 (evm_27.TU.AmTr_v1.0_scaffold00096.75)
- - - - -1.06 - - - - - - - - -1.36 -2.73 - 1.24 - 4.22 - - -
AMTR_s00102p00030630 (evm_27.TU.AmTr_v1.0_scaffold00102.7)
- - - - 1.0 - - - - - -0.53 - - - - - - 1.02 4.11 - - -
AMTR_s00102p00042210 (evm_27.TU.AmTr_v1.0_scaffold00102.14)
- - - - -1.19 - - - - - - - - - - - - - 4.24 1.44 - -
AMTR_s00105p00139750 (evm_27.TU.AmTr_v1.0_scaffold00105.68)
- - - - - - - - - -2.16 - - - - -1.68 - - - 4.4 - - -1.43
AMTR_s00109p00149690 (evm_27.TU.AmTr_v1.0_scaffold00109.165)
- - - - 0.4 - -1.86 - - -3.2 - - -1.28 - -0.72 - - - 3.38 1.88 2.38 -
AMTR_s00128p00108950 (evm_27.TU.AmTr_v1.0_scaffold00128.38)
- - - - 3.36 - - - - - - - - - 1.23 - - - 3.23 - - -
AMTR_s00141p00029830 (evm_27.TU.AmTr_v1.0_scaffold00141.6)
- - - - -0.77 - 0.23 - 0.21 - - - - 1.41 - - - - 4.04 - - -
AMTR_s00141p00076470 (evm_27.TU.AmTr_v1.0_scaffold00141.21)
- - - -0.57 1.08 - - - - - - - - -0.8 1.17 - - - 3.3 2.47 - -0.05
AMTR_s00153p00093350 (evm_27.TU.AmTr_v1.0_scaffold00153.56)
- - - - -5.03 - -6.98 - - -9.02 -1.19 -0.28 -1.17 -0.61 -3.62 0.29 -3.03 1.22 3.11 2.02 1.13 -0.06
AMTR_s00227p00020010 (evm_27.TU.AmTr_v1.0_scaffold00227.3)
- - - - 3.29 - - - -12.1 -17.67 - - -27.17 - 0.17 - - - 3.47 -17.12 - -
AMTR_s00427p00012230 (evm_27.TU.AmTr_v1.0_scaffold00427.2)
- - - - 0.71 - - - - - - - - - - - - - 4.35 - - -
AMTR_s00479p00009780 (evm_27.TU.AmTr_v1.0_scaffold00479.3)
- - - - - - - - - - 1.71 - - - - -0.2 - 2.76 3.21 - 0.02 -0.37
AMTR_s01135p00010330 (evm_27.TU.AmTr_v1.0_scaffold01135.1)
- - 2.05 - 2.9 - - - - - - - - - - - - - 3.38 - - -
AMTR_s01328p00010240 (evm_27.TU.AmTr_v1.0_scaffold01328.1)
- - - - -0.79 - -0.27 - -0.68 - - - - -22.52 - - - - 4.09 0.58 -3.1 0.4
AMTR_s02674p00003980 (evm_27.TU.AmTr_v1.0_scaffold02674.1)
- - - - -2.31 - - - - - 0.72 - -2.59 -5.15 -6.62 -3.15 -0.75 0.23 2.86 1.13 3.02 -1.04
AMTR_s04769p00001820 (evm_27.TU.AmTr_v1.0_scaffold04769.1)
- - 3.59 - 1.86 - - - - - - - - - - - - - 2.66 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.