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Heatmap: Cluster_103 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00270780 (evm_27.TU.AmTr_v1.0_scaffold00003.442)
 0.0 0.0 0.0 0.0 1.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.12 0.0 0.0 0.0 0.54 0.0 0.0 0.0
AMTR_s00008p00038810 (evm_27.TU.AmTr_v1.0_scaffold00008.12)
 0.0 0.0 0.0 0.0 2.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 2.84 0.0 0.0 0.0
AMTR_s00009p00259100 (evm_27.TU.AmTr_v1.0_scaffold00009.306)
 106.32 54.69 17.61 11.47 99.52 14.32 29.55 8.76 21.04 18.88 114.27 163.94 47.6 54.15 71.22 309.81 116.76 169.22 383.93 72.98 47.34 49.3
AMTR_s00016p00137020 (evm_27.TU.AmTr_v1.0_scaffold00016.95)
 0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.31 0.0 0.0 0.02
AMTR_s00016p00254530 (evm_27.TU.AmTr_v1.0_scaffold00016.324)
 0.0 0.0 0.0 0.0 0.07 0.0 0.01 0.0 0.0 0.0 0.45 2.92 0.38 0.27 0.84 2.28 0.0 1.08 5.59 0.71 2.82 0.76
AMTR_s00017p00238490 (evm_27.TU.AmTr_v1.0_scaffold00017.206)
 0.0 0.0 0.0 0.0 0.37 0.0 0.08 0.0 0.13 0.05 0.4 0.0 0.04 0.0 0.36 12.71 0.0 2.35 16.29 0.59 0.0 0.0
AMTR_s00017p00255710 (evm_27.TU.AmTr_v1.0_scaffold00017.278)
 0.0 0.0 0.0 2.43 0.15 0.0 0.0 0.0 0.0 0.0 1.56 1.65 1.75 1.22 0.83 2.24 1.28 7.73 9.89 1.49 7.37 0.31
AMTR_s00018p00204090 (evm_27.TU.AmTr_v1.0_scaffold00018.124)
 84.16 46.59 55.03 63.97 156.1 23.73 4.25 1.87 2.75 3.27 22.17 84.01 78.87 24.76 35.3 43.57 10.06 43.01 120.9 26.61 27.23 26.08
AMTR_s00019p00048020 (evm_27.TU.AmTr_v1.0_scaffold00019.25)
 0.0 0.0 0.0 1.1 4.26 0.0 0.0 0.0 0.1 0.08 0.0 0.0 0.14 0.15 0.42 0.0 0.0 0.0 1.86 0.0 0.0 0.0
AMTR_s00019p00068350 (evm_27.TU.AmTr_v1.0_scaffold00019.46)
 0.0 0.0 0.0 0.0 0.78 0.0 0.05 0.0 0.04 0.04 0.13 0.23 0.05 0.05 0.15 0.0 0.0 0.2 0.83 0.07 0.0 0.0
AMTR_s00021p00203530 (evm_27.TU.AmTr_v1.0_scaffold00021.170)
 0.0 0.0 0.0 1.41 22.97 0.0 3.43 2.53 10.34 7.0 21.18 9.37 9.14 4.54 15.38 6.33 2.13 16.4 21.99 5.45 14.72 6.36
AMTR_s00023p00249580 (evm_27.TU.AmTr_v1.0_scaffold00023.234)
 0.0 0.27 0.0 0.0 0.52 0.0 0.14 0.0 0.0 0.05 0.0 0.0 0.81 0.0 0.0 0.0 0.0 3.61 6.46 0.0 3.24 0.0
AMTR_s00024p00198920 (evm_27.TU.AmTr_v1.0_scaffold00024.172)
 0.0 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 0.11 0.36 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0
AMTR_s00030p00114790 (evm_27.TU.AmTr_v1.0_scaffold00030.60)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.21 0.13 0.02 0.36 0.04 1.4 7.3 1.92 7.12 0.0
AMTR_s00030p00136630 (evm_27.TU.AmTr_v1.0_scaffold00030.86)
 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.02 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0
AMTR_s00035p00097280 (evm_27.TU.AmTr_v1.0_scaffold00035.15)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.12 0.04 0.0 0.0
0.0 0.0 0.0 0.0 0.82 0.0 0.15 0.0 0.06 0.22 0.29 0.54 1.21 0.14 1.5 0.73 1.17 0.47 2.31 0.65 1.27 0.58
AMTR_s00041p00216180 (evm_27.TU.AmTr_v1.0_scaffold00041.234)
 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.29 0.0 0.0 0.07
AMTR_s00042p00080860 (evm_27.TU.AmTr_v1.0_scaffold00042.17)
 0.0 0.0 2.36 0.02 0.01 0.05 0.0 0.0 0.0 0.01 0.35 2.21 1.36 0.4 0.16 13.03 0.27 4.76 24.55 4.37 2.83 1.42
AMTR_s00042p00174850 (evm_27.TU.AmTr_v1.0_scaffold00042.46)
 0.0 0.0 0.0 8.05 1.23 0.0 0.0 0.0 0.0 0.0 15.2 58.09 2.06 0.0 0.13 39.28 0.0 95.35 316.33 0.0 0.0 0.0
AMTR_s00046p00029020 (evm_27.TU.AmTr_v1.0_scaffold00046.7)
 0.0 0.0 0.0 0.0 5.08 0.0 0.14 0.0 0.17 0.14 0.0 0.0 1.99 0.9 0.94 4.24 0.0 0.0 3.68 3.06 2.46 1.91
AMTR_s00049p00216130 (evm_27.TU.AmTr_v1.0_scaffold00049.249)
 0.0 0.0 0.0 0.1 1.08 0.0 0.02 0.0 0.19 0.07 10.15 8.68 6.34 6.16 4.16 10.08 6.6 46.63 105.32 21.12 48.41 10.06
AMTR_s00056p00200810 (evm_27.TU.AmTr_v1.0_scaffold00056.182)
 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.11 0.03 0.19 0.0 0.0 0.11 0.08 0.0 0.02
AMTR_s00061p00180340 (evm_27.TU.AmTr_v1.0_scaffold00061.196)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.58 1.54 0.0 0.0 0.04
AMTR_s00066p00045830 (evm_27.TU.AmTr_v1.0_scaffold00066.22)
 6.39 0.0 0.0 0.0 1.1 0.0 0.04 1.16 0.04 0.02 15.13 15.02 4.14 0.59 1.02 0.25 0.61 12.82 29.83 2.53 8.56 0.11
AMTR_s00068p00097220 (evm_27.TU.AmTr_v1.0_scaffold00068.48)
 0.26 0.0 1.0 15.17 9.15 1.45 115.38 10.98 85.96 104.03 44.17 108.48 17.28 31.33 16.26 0.91 5.59 179.45 496.01 30.69 61.83 8.51
AMTR_s00072p00066840 (evm_27.TU.AmTr_v1.0_scaffold00072.28)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.16 0.0 0.0 0.29 0.0 0.0 0.0
AMTR_s00072p00188730 (evm_27.TU.AmTr_v1.0_scaffold00072.134)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.01 0.0 0.04 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.01 0.0 0.01
AMTR_s00074p00150570 (evm_27.TU.AmTr_v1.0_scaffold00074.61)
 0.0 0.0 0.0 0.0 0.02 0.0 0.02 0.0 0.07 0.02 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.36 0.22 0.0 0.04
AMTR_s00081p00145720 (evm_27.TU.AmTr_v1.0_scaffold00081.56)
 0.0 13.31 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.45 0.54 0.4 0.01 0.02 3.49 1.16 13.55 22.04 5.13 15.15 3.38
AMTR_s00092p00092410 (evm_27.TU.AmTr_v1.0_scaffold00092.52)
 0.0 0.0 0.0 0.0 0.56 0.0 0.13 0.0 0.08 0.08 0.08 0.55 0.11 0.03 0.32 0.09 0.26 2.65 17.08 2.93 1.19 4.74
AMTR_s00095p00141320 (evm_27.TU.AmTr_v1.0_scaffold00095.103)
 0.0 0.0 0.0 0.1 1.73 0.0 0.08 0.0 0.07 0.04 0.07 0.0 0.02 0.4 0.68 0.0 0.12 0.0 1.57 0.67 0.0 0.2
AMTR_s00096p00118600 (evm_27.TU.AmTr_v1.0_scaffold00096.75)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.02 0.0 0.29 0.0 2.28 0.0 0.0 0.0
AMTR_s00102p00030630 (evm_27.TU.AmTr_v1.0_scaffold00102.7)
 0.0 0.0 0.0 0.0 0.48 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.0 0.49 4.19 0.0 0.0 0.0
AMTR_s00102p00042210 (evm_27.TU.AmTr_v1.0_scaffold00102.14)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.02 0.15 0.0 0.0
AMTR_s00105p00139750 (evm_27.TU.AmTr_v1.0_scaffold00105.68)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.98 0.0 0.0 0.02
AMTR_s00109p00149690 (evm_27.TU.AmTr_v1.0_scaffold00109.165)
 0.0 0.0 0.0 0.0 0.09 0.0 0.02 0.0 0.0 0.01 0.0 0.0 0.03 0.0 0.04 0.0 0.0 0.0 0.72 0.25 0.36 0.0
AMTR_s00128p00108950 (evm_27.TU.AmTr_v1.0_scaffold00128.38)
 0.0 0.0 0.0 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.45 0.0 0.0 0.0
AMTR_s00141p00029830 (evm_27.TU.AmTr_v1.0_scaffold00141.6)
 0.0 0.0 0.0 0.0 0.07 0.0 0.13 0.0 0.13 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 1.86 0.0 0.0 0.0
AMTR_s00141p00076470 (evm_27.TU.AmTr_v1.0_scaffold00141.21)
 0.0 0.0 0.0 0.3 0.93 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.99 0.0 0.0 0.0 4.35 2.44 0.0 0.42
AMTR_s00153p00093350 (evm_27.TU.AmTr_v1.0_scaffold00153.56)
 0.0 0.0 0.0 0.0 0.21 0.0 0.05 0.0 0.0 0.01 2.99 5.63 3.04 4.46 0.55 8.34 0.83 15.96 58.97 27.71 14.95 6.55
AMTR_s00227p00020010 (evm_27.TU.AmTr_v1.0_scaffold00227.3)
 0.0 0.0 0.0 0.0 1.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 1.25 0.0 0.0 0.0
AMTR_s00427p00012230 (evm_27.TU.AmTr_v1.0_scaffold00427.2)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.15 0.0 0.0 0.0
AMTR_s00479p00009780 (evm_27.TU.AmTr_v1.0_scaffold00479.3)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.54 0.0 0.0 0.0 0.0 0.41 0.0 3.2 4.37 0.0 0.48 0.36
AMTR_s01135p00010330 (evm_27.TU.AmTr_v1.0_scaffold01135.1)
 0.0 0.0 2.5 0.0 4.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 6.28 0.0 0.0 0.0
AMTR_s01328p00010240 (evm_27.TU.AmTr_v1.0_scaffold01328.1)
 0.0 0.0 0.0 0.0 0.17 0.0 0.24 0.0 0.18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.0 0.44 0.03 0.39
AMTR_s02674p00003980 (evm_27.TU.AmTr_v1.0_scaffold02674.1)
 0.0 0.0 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.0 2.17 0.0 0.22 0.04 0.01 0.15 0.78 1.54 9.53 2.87 10.69 0.64
AMTR_s04769p00001820 (evm_27.TU.AmTr_v1.0_scaffold04769.1)
 0.0 0.0 0.39 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)