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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.9 | -0.79 | -2.79 | -1.41 | -1.2 | - | - | -0.09 | 0.26 | -0.17 | 1.83 | -0.89 | 0.6 | 0.8 | -0.26 | -2.11 | - | -1.76 | -0.65 | 0.81 | 0.01 | 0.01 | 0.7 | 0.85 | -0.47 | 0.43 | 0.93 | 1.14 | 0.32 | 0.31 | 0.26 | -0.8 | -0.89 | -0.46 | -1.97 | -0.38 | -1.21 | -0.3 | -0.83 | -0.61 | 0.11 | -0.99 | 0.77 | 0.51 | 0.59 | 0.73 | 0.83 | -0.14 | 0.01 | -0.3 | 0.57 | 0.12 | -0.25 | -0.18 | -0.58 | 0.89 | |
| - | - | - | - | - | - | - | -1.01 | 1.65 | - | 2.28 | - | 0.15 | 1.85 | -2.26 | - | - | - | -1.54 | 0.73 | -1.05 | -2.11 | - | -1.17 | -1.22 | 1.55 | 2.11 | 0.83 | -0.3 | 2.38 | 0.38 | -1.14 | - | -1.74 | -0.05 | 1.01 | 0.88 | -0.65 | -0.6 | -1.79 | -0.38 | -2.16 | 0.75 | 0.33 | 0.46 | - | - | -0.86 | 0.33 | -1.19 | 0.2 | -0.51 | 0.97 | 0.88 | 1.16 | -3.54 | |
| -1.58 | 2.04 | -4.28 | -1.65 | -2.37 | - | - | 1.15 | 0.76 | 0.02 | - | -2.53 | -0.02 | - | - | - | - | -4.47 | -0.06 | 1.42 | 0.61 | 1.0 | 0.29 | -0.41 | 0.49 | 1.06 | 2.31 | -0.24 | 0.54 | 0.01 | -0.24 | -2.13 | -0.94 | -1.36 | -0.91 | -2.4 | -1.18 | -1.89 | -1.55 | -2.03 | -0.46 | -1.77 | 1.3 | 0.46 | 0.16 | 0.67 | 1.52 | -1.39 | -1.35 | 0.35 | -0.53 | 0.33 | 1.21 | 0.95 | -0.55 | -0.66 | |
| 3.57 | - | - | - | -0.15 | - | - | -1.49 | 1.08 | 0.45 | - | -2.3 | - | - | - | -0.21 | - | - | 0.66 | 2.11 | -0.91 | -0.2 | - | -1.59 | 1.02 | 1.26 | 2.91 | 1.35 | -0.05 | 0.86 | -1.49 | -3.43 | -0.12 | -0.7 | 0.24 | -3.71 | -1.95 | -1.37 | -1.49 | -0.83 | -1.75 | -3.46 | -4.66 | -2.29 | -2.54 | -2.35 | -0.21 | -0.46 | -0.2 | -0.12 | -0.52 | -0.51 | -0.52 | -0.31 | -0.62 | -0.6 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.