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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | -3.55 | - | - | - | -7.97 | - | -3.31 | -2.54 | - | -4.23 | -4.03 | - | - | - | -3.96 | 0.05 | -2.13 | -2.37 | -2.89 | - | -2.34 | 2.13 | -1.21 | -0.61 | -1.7 | -0.85 | 2.14 | 2.03 | 2.71 | 1.78 | 1.89 | 1.71 | 1.23 | 1.44 | 2.17 | 1.42 | 1.33 | 1.69 | -4.79 | -3.56 | -4.41 | 0.48 | 0.89 | -2.82 | -1.6 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | -6.31 | - | -4.95 | - | - | - | - | - | - | - | - | 0.69 | -2.77 | -3.91 | - | - | -0.84 | 0.83 | - | -0.38 | -0.29 | -0.4 | 2.54 | 2.05 | 2.84 | 1.59 | 1.76 | 1.81 | 1.84 | 1.72 | 2.15 | 1.6 | 1.0 | 1.94 | -2.97 | -4.38 | -2.94 | -0.21 | -0.68 | -2.52 | -1.77 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | -6.31 | - | -4.95 | - | - | - | - | - | - | - | - | 0.69 | -2.77 | -3.91 | - | - | -0.84 | 0.83 | - | -0.38 | -0.29 | -0.4 | 2.54 | 2.05 | 2.84 | 1.59 | 1.76 | 1.81 | 1.84 | 1.72 | 2.15 | 1.6 | 1.0 | 1.94 | -2.97 | -4.38 | -2.94 | -0.21 | -0.68 | -2.52 | -1.77 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.