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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.35 | 0.78 | -3.18 | -1.09 | -2.3 | -1.53 | -3.21 | 0.39 | 0.64 | -0.04 | 0.7 | 0.46 | 1.09 | -0.93 | 0.13 | -3.44 | - | -1.64 | 0.21 | -0.34 | 0.12 | -0.42 | 0.12 | -0.21 | -0.08 | -0.05 | 0.14 | -0.26 | -0.7 | -0.29 | 0.47 | 0.26 | 0.58 | 0.35 | 0.31 | 0.25 | 0.19 | 0.59 | 0.48 | 0.03 | 0.56 | -0.15 | -0.22 | -0.76 | 1.13 | -0.3 | -0.34 | 0.56 | 0.51 | 0.07 | 0.22 | -0.0 | -0.09 | -0.23 | -0.1 | -1.08 | |
| -0.14 | -0.61 | - | -4.78 | - | - | - | -0.77 | 0.55 | -0.46 | -0.81 | -0.58 | 0.05 | -1.52 | -0.76 | -2.2 | - | - | 0.07 | 0.67 | 0.49 | -0.08 | 0.69 | 1.47 | 1.04 | -0.62 | 0.99 | 0.95 | 0.96 | 0.76 | 0.1 | -0.52 | 0.11 | 0.24 | 0.46 | -0.12 | -0.29 | -0.17 | -0.08 | 0.14 | 0.65 | -0.24 | -0.19 | -0.48 | -0.76 | 0.01 | 0.63 | 0.48 | 0.43 | -0.04 | 0.31 | 0.48 | 0.79 | 0.27 | 0.05 | -0.03 | |
| -0.02 | -1.21 | -4.16 | -2.56 | -4.7 | -1.99 | -0.8 | -1.33 | 0.54 | 0.32 | -0.24 | -1.3 | -0.0 | -2.07 | -1.02 | -3.49 | - | -2.18 | 0.45 | 1.1 | -0.47 | -0.79 | 0.38 | 0.86 | 1.35 | -0.66 | 0.84 | 0.92 | 0.16 | 0.28 | 0.38 | 0.05 | 0.36 | 0.68 | 0.19 | 0.63 | 0.33 | 0.23 | 0.08 | 0.02 | 0.75 | 0.09 | -0.21 | -1.21 | -0.98 | -0.3 | 0.16 | 0.18 | 0.28 | 0.15 | 0.61 | 0.53 | 0.27 | 0.35 | 0.23 | 0.06 | |
| -1.98 | -0.58 | -4.19 | -3.44 | -3.24 | -2.47 | -1.15 | -1.13 | 0.65 | 0.15 | 0.7 | -0.64 | 0.96 | -4.31 | -1.46 | -1.35 | - | -1.09 | 0.03 | 1.06 | 0.4 | -0.27 | -0.32 | -0.76 | -0.08 | -0.72 | 0.98 | 1.08 | 0.34 | 1.25 | 0.56 | 0.56 | 0.62 | 0.48 | 0.54 | 0.51 | 0.49 | 0.51 | 0.52 | 0.4 | 0.64 | -0.05 | -0.52 | -1.13 | -0.02 | 0.23 | -0.4 | 0.68 | 0.83 | -0.19 | -0.11 | -0.22 | -0.6 | -0.79 | 0.18 | -1.84 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.