Heatmap: Cluster_260 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.48 0.99 2.58 -1.13 1.16 4.5 1.21 0.68 1.65 -1.94 -3.29 -2.52 -3.84 -3.26 - -3.72 -3.43 -3.11 - -0.81 -5.83 -5.86 -6.08 -5.46 - 0.09 0.36 - - - -5.18 -3.6 -4.85 - -3.69 - -4.99 - - -5.06 -4.02 -3.66 -3.3 -0.42 -1.67 -2.56 - -5.54 -4.29
-2.15 -1.78 -0.16 -1.64 -1.55 4.75 -1.93 -1.66 -0.94 -2.5 -1.09 - - - - - - - - 0.04 - - - - - 0.81 0.04 - - - - -5.01 - - - - - - - -3.96 -4.2 -5.84 -4.18 -2.69 3.48 1.55 - - -
-3.77 0.94 -2.22 -3.01 -2.3 5.36 - -0.2 -1.53 - -2.36 - - - - - -3.68 -2.37 - - -3.49 -1.69 - -2.9 - - - -0.87 - - -1.14 -0.56 - - - - -0.95 - - -2.24 - - - - - -0.15 - - -
-1.21 -1.78 -1.18 3.36 2.4 4.57 -0.82 -0.59 -3.76 -0.0 -0.89 - -0.6 -0.57 - - 0.96 -2.86 -2.74 -1.81 -6.99 -2.61 -6.66 - -0.74 -3.41 -3.2 - - -5.34 - -7.5 - - - - - - - -5.51 -6.35 -6.09 -8.11 -2.33 -3.9 -4.53 -3.55 -3.42 -1.81
1.39 0.73 0.32 1.76 1.96 3.9 0.15 0.66 -0.22 -2.26 -1.11 -1.0 -0.15 -0.16 -1.36 -1.74 0.93 -1.08 0.29 -0.12 -2.36 -1.75 -2.83 -1.64 -2.02 0.51 -0.02 -2.66 -2.66 -2.97 -4.13 -2.86 -2.46 -2.07 -3.62 -1.87 -2.13 -4.18 -1.03 -2.94 -2.53 -1.97 -2.4 -0.7 -2.02 -2.04 -0.56 -0.82 -0.57
1.29 0.55 -0.91 -2.64 -2.1 3.64 -2.72 -2.6 0.6 -3.03 -2.31 1.71 -0.88 -0.81 -0.43 -0.02 -0.65 -0.01 2.28 -0.18 -3.07 -7.77 -4.77 -3.28 1.55 0.12 0.36 -3.41 -4.36 -1.74 -2.71 -1.74 -3.47 -4.49 -3.55 -2.92 -2.88 -4.18 -3.1 -1.24 -0.15 -2.02 -1.62 -1.48 1.7 1.48 -2.85 -1.94 -2.02
-5.19 -1.77 - -0.88 -0.86 5.54 -2.22 -2.53 -4.6 -3.88 -1.33 -5.68 - - - - - - - -5.73 - -8.31 -8.07 -6.9 - - - - - - - -6.15 - - - - - - - -6.9 - - - - - - -4.35 - -
-2.66 -2.95 -3.06 2.59 2.88 4.79 0.15 0.37 -2.57 -4.5 -2.44 -1.2 -4.24 -4.33 -3.7 -3.68 -2.5 -3.59 -4.21 -2.1 -6.62 -5.52 -6.14 -5.87 -4.21 0.48 -1.19 -7.42 -7.35 -7.08 -7.73 -5.14 -6.08 -6.54 -6.09 -7.05 -6.28 -6.37 -6.18 -5.27 -5.39 -6.16 -6.03 -3.13 -1.06 -0.94 -2.66 -5.6 -6.04
-7.13 -1.84 - 2.16 - 5.44 -1.17 -1.34 - - - - - -4.58 - - - - - - - - - -6.42 - - - - - - - - - - - - - - - - - - - - - -3.92 - - -
-1.77 0.23 - - -1.45 5.14 -4.14 -3.14 -1.74 -2.17 -4.13 - -1.77 -0.93 2.2 - -2.76 -3.82 - -3.1 - - - - - - - - - - - - - - - - - - - - - - -3.7 0.59 - - 0.97 - 1.01
-2.2 -0.17 2.3 0.23 -0.71 5.34 -4.32 -5.53 -4.01 -4.25 -2.32 - - -3.49 - - - -3.4 - - -7.86 -6.77 - -6.13 - - - - - - - -5.82 - - - -3.89 - - - - - - - - - - - - -
-1.12 -0.15 1.05 3.45 1.57 4.77 -0.34 -0.1 -0.92 -2.45 -1.18 -5.62 - -3.29 - - -1.82 -3.67 -1.15 -2.98 -7.45 -5.51 -8.44 -6.65 -2.81 - - - - - - -4.91 - - - - - - - -5.94 -5.89 - -5.71 -3.83 - -4.63 - -3.48 -4.39
-0.83 -1.25 -1.92 1.52 -0.31 5.31 -1.25 -0.82 -0.39 -2.74 -0.73 -5.43 -2.39 -2.52 -2.82 - -3.48 -1.85 - -2.55 -5.33 -6.72 -5.8 -8.28 - - - - - - - - - - -2.9 - - - - -7.72 -6.9 -6.15 - -1.79 -2.63 -4.62 -4.27 -4.46 -4.37
-2.81 0.19 -0.13 2.99 -0.05 5.19 -2.3 -3.88 -3.47 - -2.94 - - - - - -4.13 - - - -2.48 - -3.85 - - - - -0.66 - - - - - - - - - - - - - - - -5.57 - - - - -
0.25 0.01 2.71 -3.24 -3.96 5.08 -0.94 -1.18 -0.97 -2.62 -1.45 -2.03 -3.09 -3.02 - -2.1 -6.72 -3.71 - -2.57 -3.06 -3.49 -4.2 -3.62 - -3.38 - - - - -3.16 -1.66 -3.19 - -3.16 -3.26 - - -2.72 -5.9 -6.69 -6.02 -6.17 -1.36 0.48 -2.16 - - -
-0.15 1.91 1.05 -2.08 -3.55 5.0 -0.29 -0.37 -8.42 -1.17 0.09 - -0.24 -0.04 - - 0.06 -1.32 - -1.42 -6.05 - -6.16 - -5.63 - - -5.31 -7.25 -7.58 -5.69 -5.03 - -7.41 -5.98 -7.85 -5.8 -5.1 -4.85 -5.61 -4.94 -5.36 -4.96 -0.28 - -5.29 -1.69 -0.71 0.02
0.99 1.07 -0.36 -1.84 0.3 4.93 -0.84 -0.94 -3.44 -2.4 -0.81 - -1.6 -1.19 -0.37 -0.39 -0.17 -0.64 - 1.07 - -5.6 - -3.75 - -1.74 0.31 - - - - - - - - - - - - -4.32 -5.18 -4.09 - 0.59 - -2.6 -1.82 -2.02 -1.34
-0.68 0.65 1.65 0.5 -0.06 4.36 -0.58 -0.07 -0.42 -2.63 -0.98 1.01 -3.61 -2.39 1.47 0.71 0.93 -1.52 0.96 -0.8 -6.01 -2.28 -7.59 -1.94 - 1.05 0.61 -5.75 - - -4.9 -6.31 -4.93 - - - -5.86 - -3.13 -6.19 -4.96 -5.48 -5.7 -5.24 -0.38 -0.29 -3.74 -4.2 -2.98
-2.49 -1.54 -5.44 -2.41 -2.33 4.39 0.12 -0.19 -2.37 -2.59 -0.65 -0.94 -0.34 1.11 -2.66 -4.64 -2.34 0.19 -1.78 -3.3 -2.39 -2.45 -2.05 -1.58 -0.6 -3.7 -5.38 -2.41 -2.17 -3.24 -3.11 -2.99 -2.28 -4.74 -3.57 -2.23 -2.61 -3.32 -2.54 -4.25 -4.01 -3.67 -3.46 -3.28 -3.55 -1.8 3.53 1.55 -3.06
1.65 -1.14 0.11 -2.3 -3.42 4.11 -4.22 -4.29 -0.03 -1.52 -0.9 -2.06 - - 1.1 1.77 -3.3 -1.54 3.65 -0.25 -6.54 -0.45 -7.6 -1.07 - 0.1 0.36 - - - - - - - - -4.27 - - - - -3.71 -4.25 -5.1 - -0.47 -0.71 - - -
-1.5 0.07 -1.07 -4.79 -3.02 5.25 -1.35 -1.32 -2.96 -0.74 -0.83 -2.88 -1.08 -0.64 - -2.58 -1.02 -1.26 -0.9 -1.38 -5.78 -8.26 -4.21 -5.88 0.46 -1.52 -2.35 - - -4.51 - -5.08 -4.71 -4.34 - -4.74 - - -4.23 -7.26 -7.19 -7.53 -6.55 -0.08 -3.49 -2.38 -3.95 - -3.56
0.55 0.6 0.44 1.45 0.15 4.68 -0.57 -0.48 -2.89 -1.02 -0.5 -2.32 -0.48 -0.2 - -1.45 1.17 -0.99 -1.77 -0.66 -4.67 -5.94 -6.29 -7.83 -1.85 -0.96 -0.54 - - -2.96 - -3.73 -4.37 - - -3.6 -4.5 -4.85 -4.1 -5.58 -3.65 -3.95 -4.4 -0.95 -2.49 -1.95 -1.53 0.4 0.87
-5.19 -4.85 -2.9 0.8 -1.66 5.29 -0.98 -0.44 -1.42 -4.43 -2.91 -2.87 -1.54 -1.42 0.12 -0.24 -3.57 -0.72 - -1.01 -8.54 - -8.58 -7.38 -0.59 -1.45 -2.91 -5.68 -3.75 -5.67 - -6.83 -5.67 - - - -4.41 -5.39 - -7.85 -6.49 -6.53 -5.7 -2.61 -5.36 -2.76 -3.73 - -
-4.67 -3.01 -2.68 -0.28 -1.4 5.45 -2.79 -1.37 -4.0 -7.37 -6.19 -3.49 -4.79 - -3.75 -1.74 -3.18 -5.8 - -2.44 -5.9 -3.97 -6.19 - -1.68 0.22 -2.26 - -4.97 - -5.19 -6.83 - -2.42 - -4.94 - - - -6.53 -4.91 -5.63 -5.04 -5.6 - -5.55 - -3.87 -3.73
0.71 1.05 2.27 -0.5 -2.61 4.12 -0.16 0.19 -0.93 0.02 -0.04 -0.03 -1.29 -0.37 -1.15 -1.11 0.97 -0.72 -2.22 -0.88 -3.84 -0.99 -4.9 -3.59 -0.5 -1.76 -2.25 -5.08 -5.13 -3.25 -2.38 -2.62 -3.37 -3.61 -3.74 -2.49 -3.06 -3.18 -3.67 -3.38 -3.23 -4.33 -4.23 0.81 0.78 0.62 -0.03 0.14 -0.58
0.31 -1.18 -1.86 2.76 3.01 3.74 0.91 1.49 0.81 -4.33 -3.45 0.46 -2.45 -0.59 -0.65 -0.38 -2.89 -0.28 - 0.03 -4.5 -3.09 -4.85 -2.11 -2.57 0.72 1.08 -5.39 - -4.37 -3.69 -4.17 -4.34 -5.03 -4.18 -3.8 -4.36 - -3.42 -4.84 -3.1 -5.11 -3.91 -4.35 -0.66 -0.61 -4.07 -3.54 -
1.29 -0.74 0.47 -5.68 -3.75 4.28 -1.78 -2.12 1.69 -3.93 -0.37 -5.47 -1.7 -0.73 -0.74 -0.54 0.88 0.0 2.89 -1.51 -8.55 -5.31 -8.02 -5.49 -4.09 -0.2 -0.15 -7.25 - - -6.25 - -6.6 - - -5.91 - -7.86 -7.72 -8.08 -7.73 -8.32 -7.81 -2.98 -0.51 0.62 -1.21 -0.47 1.1
-6.66 -2.04 -1.41 -2.59 -3.12 5.49 -2.55 -1.94 -0.99 -6.09 -4.54 -1.98 - - - - -5.35 -2.94 - -7.75 -4.92 -2.74 -5.29 -2.14 -3.93 - -3.4 - -3.24 -5.23 -3.13 -3.26 -4.97 -4.69 -3.88 -4.22 - -2.44 -3.53 - -8.02 - -6.81 -6.2 -3.61 -1.77 - -4.6 -
-0.82 2.4 1.52 -3.33 -2.04 5.1 - - -3.07 - -3.35 - - -0.02 - - - - - -0.63 - -4.91 - - - -1.21 -1.28 - - - - - - - - - - - - - - - - - -1.55 1.33 - - -
0.51 1.26 -0.91 -4.11 -0.6 4.9 -0.16 -0.33 1.96 -2.0 -0.44 -3.34 -1.16 -1.39 -2.17 -2.15 0.09 -2.59 -1.46 -1.1 -7.11 - -7.13 -7.53 - -2.49 -1.01 - - - - -4.64 - - - - - - - - -6.65 -6.93 -6.95 -1.45 -0.98 -2.1 -1.44 -1.8 0.57
1.37 0.5 2.04 2.55 -2.6 4.62 0.79 1.26 2.36 - -2.26 - -2.33 -2.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.11 - -
2.15 -0.85 -0.12 -2.39 -2.24 3.92 -5.75 -6.4 1.73 -10.57 -2.91 0.48 -7.68 -1.74 0.41 0.48 -3.06 0.03 1.38 0.47 -3.49 0.31 -0.06 0.35 0.45 1.35 1.68 -3.04 -5.22 -3.03 -3.97 -6.44 -2.97 -6.08 -4.32 -3.5 -2.31 -3.6 -2.63 -3.57 -2.3 -2.2 -2.79 - -0.04 0.21 - - -
-2.85 -0.78 -0.44 -0.11 -0.18 5.07 -1.62 -0.95 -3.93 -1.44 -1.77 -1.65 0.91 0.23 -1.57 - -1.42 0.66 - -2.74 -2.06 -7.52 -2.58 -6.63 -2.54 -2.95 -1.91 -2.15 -3.79 -3.49 -1.14 -3.25 - -3.21 -1.52 -2.74 -0.26 -2.38 -2.52 -4.83 -4.04 -4.27 -2.75 -3.46 -3.01 - -1.21 -4.37 -4.12
-4.58 -1.85 1.3 - -4.47 5.51 - - -5.42 - -5.82 -3.39 - -5.06 - -2.51 - - - -3.29 - - - -6.91 - - - - - - - -5.6 - - - - - - - - - - - - - - - - -
-0.8 -0.92 0.93 -0.44 -0.05 5.42 - - -3.48 - -1.22 -0.95 -8.18 -6.03 - - - -6.08 - -3.81 - -10.35 -9.02 -7.78 -5.56 -3.59 -3.03 - - - - - - - - - - - - - -8.43 - - - - - - - -
-1.3 0.97 -0.44 -2.67 -1.02 3.77 -1.58 -3.9 -1.51 -0.22 0.36 -3.87 -3.18 1.36 - -1.1 -3.09 -1.56 2.9 -1.89 -3.63 -5.06 - -4.25 3.75 -1.41 - - - - -1.55 -2.19 - - - -1.28 - - - -3.71 -4.02 -2.09 -3.82 -0.24 -1.19 -1.68 -2.56 -2.91 -
-3.02 1.68 -3.66 - -3.77 5.05 -4.72 -1.26 -2.36 - -3.03 - 2.16 1.97 - - -1.7 -1.72 - -0.96 - - - - 0.53 - -3.58 - - - - - - - -1.42 - - - - - - - - -2.82 - - - - -
-2.63 0.42 -3.0 1.66 1.03 5.13 0.79 1.18 -2.44 -5.23 -4.02 -4.81 -4.36 -1.82 -1.2 - -3.74 -4.94 - -3.72 -6.23 -4.9 -6.64 -6.96 -1.07 - -1.53 -3.36 - - -3.36 - - - - -3.34 - - - -6.72 -5.04 - - -7.27 -4.0 -1.79 - - -2.17
0.4 0.27 - - - 5.34 - - - - -1.77 - - 1.41 - - -0.26 -2.02 - 0.4 -2.36 - - - - - - - - - - - - - - - - - - - - - - -1.47 - - - - -
-3.69 -2.66 -2.09 0.63 -1.41 5.4 -1.02 -0.54 -4.15 -0.59 -1.41 -2.94 -3.54 -5.88 -5.65 - -5.77 -4.19 -3.96 -5.9 -5.71 -7.52 -6.06 -6.94 -3.6 -7.1 -5.95 -5.15 -5.24 - -6.73 -4.08 - -6.4 - -6.84 -6.69 -5.62 -5.99 -6.89 -7.15 -7.02 -6.85 -0.34 -2.32 -2.93 -2.83 -3.31 -4.62
-0.46 0.98 -3.39 -3.85 - 5.28 - -4.11 - - -4.08 - 0.22 -0.42 - - 1.84 -1.46 - -1.86 - - - - -1.02 - -1.23 - - - - - - - - - - - - - - - - -6.77 - - - - -
-3.06 0.34 -2.53 4.17 0.53 4.65 -2.62 0.37 - -2.86 -2.82 - - - - - -3.4 -1.67 - -1.22 - - - - - - - - - - - - - - - - - - - - - - - - - -1.62 - - -
1.36 0.56 0.23 -1.17 -2.55 4.24 0.17 0.05 -1.0 -1.5 -0.15 -3.73 0.01 0.22 0.97 0.96 1.06 0.68 -0.34 -0.25 -5.14 -5.27 -5.67 -5.4 -1.18 0.04 0.99 -6.77 -6.05 -6.17 -5.9 -4.47 -6.09 -8.78 -6.04 -4.67 -4.16 -5.7 -4.69 -5.32 -4.99 -5.17 -4.89 -0.09 -0.61 0.09 -1.11 -0.51 0.16
1.08 -1.7 -1.08 -6.16 -3.57 4.28 0.0 -0.27 -1.2 -2.08 -1.98 0.44 -0.54 -1.17 -0.53 2.17 0.29 -0.18 1.79 0.38 -8.01 -3.9 -6.81 -3.03 -2.51 1.68 1.34 - - - - - -5.33 - - - - - - -9.12 -6.59 - -6.88 -0.25 -0.46 -0.33 -2.11 -2.1 -2.03
-3.75 -1.41 -0.25 -7.1 -5.68 5.55 - - -3.63 - -10.46 -4.76 - -3.27 - - -4.82 -5.38 -1.91 - -5.35 - -5.59 -5.28 - - - - - -4.77 - -3.87 - -4.24 -4.68 - - -4.99 - -5.46 -5.88 -5.8 -5.73 - -3.99 - - - -
1.89 0.47 -0.69 -3.17 -4.14 3.48 -4.06 -3.05 0.05 -2.31 -1.75 0.65 0.6 0.47 0.66 0.75 -0.9 0.01 1.52 0.35 -1.84 -1.94 -1.76 -1.88 -0.56 1.48 1.23 -1.19 -1.53 -1.94 -1.63 -1.03 -1.92 -2.46 -1.73 -1.61 -2.32 -1.56 -1.76 -1.82 -1.16 -1.37 -0.85 -3.23 1.1 0.39 -1.91 -1.78 -1.51
-3.46 -0.18 -4.74 3.79 1.72 4.86 -1.45 -0.76 -1.82 -5.69 -4.68 - - - - - - - - -2.94 - - - - - - - - - - -2.15 -2.06 - - - - - - - - - - - - - - - - -
- - 0.96 - -1.81 5.08 -1.8 -2.78 - - -5.12 - -1.7 2.46 - - -1.31 -3.47 - -0.82 -4.41 - -5.11 - - - -1.82 - - - - - - - - - - - - - -4.83 - -4.52 2.18 - -1.18 -1.88 - -
-0.92 1.69 0.76 - - 4.45 - -2.22 -0.19 - 0.06 - 1.08 0.19 - - - -0.9 - -1.15 -1.0 - -1.6 -4.59 - -0.32 - 0.31 - 1.75 - -0.1 - 1.49 0.92 0.86 - - - -3.38 - -2.34 - -1.22 - - -0.11 - -
2.03 -0.22 -2.43 - -0.63 3.44 - - 0.53 - -2.74 -2.34 -3.18 -3.44 -1.15 - -5.13 -1.3 3.96 1.11 -2.53 -3.55 -3.95 -4.03 - 1.06 1.51 -2.33 -3.35 -2.05 -2.57 -0.61 -1.66 - -1.6 -1.74 -2.91 -4.89 -1.28 -2.78 -2.28 -1.62 -2.06 -7.14 0.61 0.06 - -8.47 -
0.16 0.76 -0.11 0.77 1.3 4.88 -1.45 -1.79 -0.3 - -2.54 -3.43 -1.91 2.19 - - -1.27 -2.66 - -2.76 -3.7 -3.09 -4.38 -1.24 - -1.25 -3.42 -2.15 -3.32 - -3.19 -4.18 -3.22 - -2.19 -2.27 -3.15 - -1.74 -5.72 -2.38 -3.22 -3.07 -3.14 -0.86 -0.48 - - -
-0.24 0.17 -1.83 -2.11 -0.03 4.73 -1.34 -1.4 -0.85 -1.86 -1.39 0.3 0.88 1.19 -1.39 -0.36 -1.15 -0.28 0.32 -1.64 -2.61 -3.02 -2.79 -3.61 -0.27 -2.64 -1.7 -3.3 -2.95 -1.11 -2.61 -1.08 - - -3.19 - -3.41 - -3.0 -3.97 -3.67 -4.3 -1.97 -1.67 0.14 -0.73 0.01 -0.96 -2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.