Heatmap: Cluster_116 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
0.27 2.49 0.95 - 0.13 -5.57 - - 3.85 -1.62 -2.31 -0.09 - 0.81 - 0.1 - -1.99 2.76 0.06 -2.77 -3.37 -3.36 -0.75 - 0.83 1.74 - - - - -0.07 - - - -1.15 0.23 - - -0.7 -1.36 -0.34 0.64 - - -1.89 - -3.04 -
1.62 3.76 - - - 3.44 - - 3.87 - - - - - - - -1.01 - - - - - - -0.76 - - - - - - - 2.55 - - - - - - - - - - - - - - - - -
-1.26 3.93 1.19 - - - - - 4.96 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.54 4.35 - - - - - - 4.8 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.07 3.29 -3.24 2.16 0.98 2.49 - 0.83 3.5 - -2.65 -1.15 -0.48 0.22 - - 0.61 -3.52 - -0.84 -2.44 -1.83 -4.07 0.93 0.37 - -1.09 - - - - -0.7 -0.84 - - - - - -0.33 -1.93 -0.69 - -3.13 -4.36 - -0.51 -0.05 -1.42 -
-3.43 3.31 1.11 -2.14 - -0.59 - - 4.52 - - -0.4 - - - - -0.1 -3.21 - -6.74 -3.14 - -2.89 -0.45 - 2.36 - - - - - 1.76 - - - - - - - -2.25 -2.8 - -2.43 - - 0.2 - - -
-1.62 4.59 2.12 - - - - - 4.27 - - - - - - - - - - - - - - 0.05 - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.43 - - 4.14 - - - 4.18 - - - - - - - - - - - - - 1.32 - - - - - - - - - - - - - - - - - - - - - - - - - -
1.25 3.23 -1.5 - - - - - 3.97 - -1.95 - - - - - - -1.67 - - - - - - - 3.66 - - - - - - 3.0 - - - - - - - - - - - - - - - -
-1.61 4.31 0.1 - - - - - 3.76 - - - - - - - - - - - - - - -0.63 - - - - - - - - - 3.77 - - - - - - - - - - - - - - -
0.22 3.54 -0.23 - - - - - 4.6 0.32 -1.7 - - - - - - - - - -0.68 - - 0.2 - - - - - 2.77 - - - - - - - - - - -0.76 - - -1.13 - - - - -
-2.76 4.25 -0.85 - - - - - 4.24 - - -0.35 - 2.12 - - - - - -1.89 - -2.31 - 0.46 - - - - - - - 1.77 - - - - - - - - - - - - - - - - -
- 3.77 - 2.69 - - - - 4.46 - -1.48 - - - - - 1.8 - - - 1.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.1 0.87 1.22 -3.11 -0.24 3.43 0.27 0.94 2.26 -1.12 -2.38 -0.81 1.05 1.48 -0.2 -0.14 -1.2 -0.16 1.53 0.52 -1.87 -3.12 -2.08 -2.8 -1.86 -0.09 -0.86 - -1.74 - -0.12 -0.31 - - -1.98 - -3.46 - -1.1 -4.44 -2.55 -2.75 -1.99 0.24 0.34 0.14 - - -
- - - - 1.55 4.62 -1.34 -2.33 4.37 - -7.57 - - - - - - -2.04 - -6.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.26 - - - - - - 4.58 - -0.0 - - - - - - - - - - - - -0.05 - - - - 3.75 - - - - - - - - - - - - - - - - - - - -
1.8 3.67 - - - - - - 4.96 - -2.25 - - - - - - - - - - - - 0.56 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.29 1.14 - 3.0 0.85 2.79 -0.17 -0.06 3.24 - -0.58 -3.26 1.91 0.84 - - -0.69 -0.11 - 1.32 -2.6 -3.96 -3.99 -0.7 - 0.17 0.21 -1.61 - -1.0 - -0.22 - - - - - -1.06 -1.3 -2.24 -1.55 -2.19 -0.92 -2.36 - - -1.75 -2.06 -1.85
- 4.16 - - - - - - 3.74 -0.12 - - - - - - - - - - - - -0.06 - - - - - 3.91 - - - - - - - - - - - -0.48 - - - - - - - -
1.38 4.31 - - - - - - 4.68 - -0.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.11 3.81 1.22 - - - - - 4.98 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.82 3.89 - - 2.06 - -0.44 -0.43 4.41 - - - - - - - - -0.7 - - - -0.63 - - - - - - - - - 0.87 - - - - - - - - -0.53 - - - - - - - -
-0.73 4.34 - - 1.5 - - - 4.51 - -0.84 - - - - - - - - - - - - 0.89 - - - - - - - - - - - - - - - - - - - - - - - - -
-0.32 3.89 - - - - - - 5.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.61 - - - - - - 5.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.19 - - - - - - - -
-1.64 1.18 -0.98 -2.5 1.96 4.09 -4.15 -5.72 4.55 -2.76 -3.48 - -3.51 -1.69 - - -1.23 -5.52 - -8.45 - - -6.25 -5.73 - -2.73 - - - - - - - - - - - - - - - - - -5.05 - - - - -
1.17 3.51 - 1.15 0.97 - 0.35 0.84 4.29 - -2.06 - - - - - - - - - - -0.77 -2.84 -1.24 - - - - - - - 1.07 - - 1.06 0.96 - - - -0.44 - - -1.77 - - - - - -
- 4.2 - 1.0 - - - - 4.38 - - - - 2.2 - - - - - - -0.25 - - - - - - - - - - 1.29 - - - - - - - - - - - - - - - - -
-0.54 3.53 - - - 2.41 - - 4.56 - -5.08 - - -0.32 - - -1.91 -3.79 - - -3.31 -3.47 - 0.75 - 0.22 - - - - - - - - - - - 0.27 - - -1.66 - - -3.18 - 1.09 - - -
-0.41 4.05 - - - - - - 4.89 - - - - - - - - - - - - - - 0.97 - - - - - - - - - - - - - - - - - - - - - - - - -
0.83 4.25 0.61 - - - - - 3.93 - -1.67 - - - - - - - - - - - - 0.3 - - - - - 2.77 - 1.61 - - - - - - - - - - - - - - - - -
-2.73 2.89 - -0.56 1.28 1.58 - - 3.6 -1.85 -4.16 - - 3.37 - - - -5.19 - - -1.3 -0.14 0.41 -1.61 - - - - 0.56 - - -1.3 - - 0.94 0.59 - - 0.43 -1.12 -1.56 -0.05 0.06 -3.3 - - - - -
-0.96 1.8 0.96 - - 0.03 - -4.15 3.31 -2.19 -2.28 -0.47 -1.79 - - 0.24 -1.7 -1.74 1.91 -3.21 -0.96 -0.85 -1.3 -0.35 0.35 - -1.1 0.06 - 2.21 -0.03 1.41 - - 0.27 -0.92 - 1.26 - -1.59 -0.43 -0.62 0.95 -2.79 0.76 -0.39 -0.23 -1.42 -
0.54 4.3 - - - - - - 4.11 - - - - - - - 1.95 -0.06 - - - - - - - - - - - - - 2.51 - - - - - - - - - - - - - - - - -
- 4.3 - 1.58 - - 0.7 - 4.62 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.69 2.97 - - - - - - 5.32 - -3.97 - - - - - - - - - - - - - - - - - - - - -1.05 - - - - - - - - - - - - - - - - -
-1.77 3.26 1.03 1.87 - 4.04 - -1.7 3.83 - -0.21 - - - - - -2.9 -4.99 - - - - - -2.41 - - - - - - - - - - - - - - - - - - - -3.39 0.21 - - - -
-2.85 3.31 - - - - - 1.84 4.85 - -4.56 - - - - - -1.48 1.43 - 0.69 - -2.09 - -0.24 - - - - - - - - - - - - - - - - -1.56 - - -1.31 - - - - -
-0.53 1.22 0.43 -0.67 0.25 2.84 1.37 1.64 1.55 -0.61 0.14 -2.83 -0.79 -0.2 -4.1 - 1.21 0.15 0.17 -2.69 -2.49 -5.37 -2.48 -2.39 -2.49 -2.59 -5.41 -1.93 -2.2 -2.56 -2.52 -1.65 -3.56 -2.48 -2.02 -2.7 -2.69 -2.75 -2.1 -2.87 -1.94 -1.59 -1.03 -1.1 -2.02 0.47 2.88 1.92 0.21
1.31 1.56 - - - 4.45 - - 3.88 - - 1.87 - - - - - 1.26 - - -0.98 - - -1.39 - - - - - - - - - - - - - - - - - - - - - - - - -
0.08 3.89 - - -1.25 2.55 - -2.19 3.87 - -1.87 0.45 0.02 -0.36 - - -2.37 -0.28 - -2.14 -2.79 - - - - - - - - - - - - - - - - - - - - - - 0.67 0.59 1.34 - - 0.63
2.06 4.31 - - - - 0.72 - 4.35 - - - - - - - - 0.46 - - - - - 0.72 - - - - - - - - - - - - - - - - - - - - - - - - -
2.59 4.4 -0.76 - - - - - 4.07 - - - - - - - 0.59 - - - - - - -0.62 - - - - - - - 1.27 - - - - - - - - - - - - - - - - -
- 4.69 - - - - -0.53 - 4.42 - -1.91 - - - - - - - - -0.29 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.32 2.81 -1.23 -2.34 0.49 2.51 -2.78 -1.83 2.83 -3.71 -1.84 -1.1 -1.26 0.65 -0.88 -1.07 -1.93 -2.56 - -1.31 -0.77 -3.36 -1.62 -0.55 -0.01 -1.77 -1.18 -1.78 -0.55 -0.71 -0.99 1.95 -0.84 -1.58 0.53 0.36 -0.7 0.06 -0.09 -1.14 -0.3 -0.41 0.3 -0.2 0.1 -0.38 -3.91 -3.06 -3.63
- 4.45 - - - - - - 4.75 - -1.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.19 3.98 - - - - - - 4.58 1.14 -1.64 2.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.47 - - - - - - - -
-0.63 1.27 0.49 1.5 - 2.85 - - 4.5 - 0.53 - - - - - -1.89 0.75 - -2.17 -0.84 - -0.57 -1.63 - - - - - - - 2.14 - - - - - - - -1.94 -5.95 0.64 -7.94 -1.26 - - - - -
0.65 1.54 0.69 -5.94 -2.74 -0.02 -0.71 -0.84 2.75 -0.77 -0.89 -1.35 0.71 2.1 -0.14 -2.46 0.55 0.34 3.35 -0.3 -2.96 -1.74 -2.88 -1.94 -0.73 -1.23 1.13 - -3.65 -2.56 -2.59 -0.79 -2.49 - -1.84 -1.55 -2.39 -2.24 - -4.36 -2.74 -3.0 -2.67 -0.09 0.13 -0.02 -0.67 -1.35 -0.19
-0.22 2.6 - -2.34 -0.23 3.01 - -1.62 3.63 - -2.1 - -0.84 3.08 - - 3.45 -3.63 - - - - - - - - - - - - - - - - - - - - - - - - - -3.9 - - - - -
0.02 3.94 -0.08 - 2.36 - - - 4.07 - - - - - - - - - - -0.91 -1.55 - -1.47 -1.14 - - - - 2.03 - - - - - - - - - - -1.28 - - - - 1.87 - - - -
-1.36 3.0 -2.83 -1.5 1.15 4.09 - - 4.05 - -9.48 - - - - - - -4.51 - - - -4.93 -4.84 -0.45 - -1.12 - - - - - 1.31 - - -0.95 - - - - - - - - -4.93 - - - - -
0.74 4.47 - - - - - - 4.55 - - - - - - - - -0.73 - - - -2.2 - -0.6 - - - - - - - - - - - - - - - -1.76 - - - - - - - - -
-1.37 4.78 - - - - - - 3.86 - - - - - - - - - - - - - - - - - - - - - - 2.54 - - - - - - - - -0.25 - - - - - - - -
-2.01 2.58 -0.44 - - - - - 4.35 - 0.71 -1.6 - -0.07 - - -3.41 -1.06 - -6.99 - -3.59 - -2.22 1.28 - - - - - - 0.41 - - - - - - -0.18 - - - - 0.11 2.29 2.86 - - -
1.45 3.98 - - - - - - 4.86 - -0.03 - - - - - - - - - - - -1.1 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.44 1.78 -0.66 1.0 0.57 0.91 -2.37 -0.52 2.85 -3.47 -0.13 -0.43 -3.47 -1.08 - - -3.88 -3.36 - 0.0 0.14 -1.07 0.34 -1.07 0.55 -0.69 -2.59 0.27 0.67 0.8 -0.14 1.21 -0.06 -1.01 -2.14 -0.88 -0.36 1.37 -0.44 -0.41 -0.06 -0.04 0.73 0.28 -0.89 -1.16 -2.76 -2.96 -2.86
- 4.15 - - - - - - 4.25 - - - - 1.88 - - - -0.65 - - - - - - - 2.98 - - - - - - - - - - - - - - - - - - - - - - -
- 4.62 - - - - - - 4.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.29 4.3 - - - - - - 4.81 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.77 3.37 0.97 - - - - - 5.17 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.28 4.53 - - - - - - 4.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.