Heatmap: Cluster_128 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
0.87 1.16 -0.15 1.04 0.52 0.74 1.87 1.9 -1.19 0.5 0.61 -0.57 1.56 1.52 -3.12 -2.74 -0.02 0.48 -1.9 -0.02 -5.77 -5.85 -1.1 -5.59 -1.48 -2.94 -2.47 - -6.49 -4.82 - -4.92 -6.02 - -5.15 -5.99 -6.05 -6.3 -4.2 -6.27 -5.79 -5.64 -6.52 0.82 0.5 1.45 1.18 1.83 2.17
-4.69 -0.89 -1.42 - -2.72 3.67 -3.44 -1.92 3.42 -3.05 -2.59 - -3.14 3.78 - - 2.77 -6.2 -1.13 -0.99 -4.97 - -6.43 -4.14 - -1.2 - - - - - -1.45 - -3.57 -3.91 -1.66 - - - -5.72 -5.53 -3.55 -4.62 -2.41 -4.29 - -4.09 -2.86 -3.05
-1.93 -1.29 1.56 -4.68 -2.44 3.53 -3.62 -2.92 0.11 -0.55 0.57 -1.0 0.39 2.61 - - 1.9 0.81 2.85 -3.79 -3.83 -5.21 -4.87 -5.45 -0.95 - -5.65 -4.49 -3.72 -3.83 -4.18 -3.62 -2.57 -4.97 - -3.93 -3.92 -3.49 -4.27 -7.36 -7.41 -8.27 -8.32 -0.1 0.95 1.32 1.11 -1.86 -3.56
-5.29 -2.74 - - - - -1.89 -3.04 -0.82 -5.29 0.08 0.33 -4.75 -5.68 3.08 2.38 - 1.22 -0.66 0.42 -5.65 -6.97 - -9.06 1.8 1.15 1.38 - - -4.55 - - -3.65 -5.84 - - - - - -4.96 -3.22 -2.49 -4.53 -2.05 2.09 1.43 3.51 -3.75 -
-0.07 1.75 -2.74 -2.7 - - 3.66 3.84 -0.82 -0.23 0.29 1.35 -0.23 -2.24 - - 2.88 0.43 - -2.55 -5.14 - -4.43 -4.56 - -2.42 - -0.1 -1.76 - - -3.25 - - - - - - - - - -4.76 -3.69 -4.65 - -2.61 -2.62 -2.82 -
-0.56 1.48 -4.15 - 2.39 - -1.41 -5.21 2.64 -2.96 0.76 0.59 2.55 2.92 - - 3.69 0.8 - -3.81 -5.16 - -5.52 - -0.71 - -1.19 - - - - -3.91 - - - - - -2.22 -2.17 -5.08 - -2.84 -4.09 -5.24 - - -2.11 - -
-2.12 3.58 1.27 - - - - - 1.37 - -1.23 -0.96 - - - 3.63 -1.25 2.55 - 1.71 -1.62 2.11 -3.25 -3.81 - 0.35 - - - - - -1.42 - - - - - - - -1.1 -1.78 - -2.21 -1.67 0.24 - - - -
-0.86 1.68 1.12 -1.3 -2.47 -0.4 1.97 2.89 0.81 -2.99 -5.03 -3.19 1.12 1.54 - - - -1.14 - -0.02 -1.2 - -0.55 -3.11 - - - 0.32 - - -1.67 -3.66 -0.7 -1.22 0.01 -0.19 0.53 0.62 -0.53 -0.23 1.81 1.67 2.24 -3.61 - - - - -
-0.13 0.33 -1.5 -3.72 -5.92 -0.18 2.18 2.04 -0.63 -1.5 -1.14 -2.1 1.1 1.1 1.21 0.37 -0.45 0.81 3.13 -0.45 -1.48 -1.69 -1.68 -1.46 1.01 -1.85 0.86 -1.33 -2.85 -2.85 -2.54 -0.98 -1.95 -2.18 -1.69 -1.08 -2.51 -1.4 -1.22 -2.21 -1.27 -1.82 -0.95 0.29 -0.16 0.28 -0.2 -1.86 -1.6
-5.99 0.34 -12.05 - - - 0.73 1.17 -0.24 -3.97 -4.42 -0.71 1.37 0.33 0.98 1.76 -3.68 1.07 -3.07 0.98 0.28 -0.65 -0.77 -0.62 -0.83 0.72 1.2 0.15 0.42 0.24 -0.14 0.58 -0.09 -0.08 -0.08 0.03 -0.17 -0.19 -0.0 0.2 0.86 0.75 1.2 0.02 -1.21 -2.8 -8.84 - -
-5.87 0.53 - - - - -2.94 0.21 -2.33 - -2.76 -1.27 1.61 3.25 - - - -0.02 - 1.2 0.34 -1.36 -0.65 -0.12 - - - 1.8 -1.47 0.32 0.89 -0.29 0.84 - 0.23 0.28 1.35 0.39 -0.23 -1.1 1.96 0.93 1.77 -4.0 - - - - -
-2.95 1.49 - - - - -0.31 -4.17 -3.04 -4.42 -1.09 -0.98 - -1.15 1.74 2.78 - 1.81 - 1.62 - -0.82 -4.37 -1.2 1.37 - - - - - - - - - - - - - - -1.0 -1.08 -0.59 -1.59 1.78 2.76 3.36 -0.44 - -
-6.02 2.26 -11.11 - -7.83 -6.0 1.45 2.52 0.55 -3.83 -3.9 -1.95 -3.43 -2.91 -0.56 0.4 1.49 0.66 -4.16 -1.09 0.0 -0.57 -0.47 -0.99 -2.99 -1.44 -3.0 0.29 0.35 -0.61 -0.76 -0.79 0.34 -1.23 -1.97 -1.58 -1.76 -1.64 -1.43 1.63 2.07 2.07 2.0 -3.68 -5.95 -7.88 -8.71 - -
-0.62 1.87 -2.47 -9.93 -9.57 -4.41 -0.65 -0.57 0.98 -3.05 -2.45 1.83 2.45 3.45 -1.5 -1.24 3.57 1.2 - -1.69 -3.0 -3.57 -3.94 -6.98 -3.19 -4.08 -2.82 -1.11 -3.02 -2.66 -2.83 -3.04 -2.77 -5.85 -3.83 -2.97 -3.73 -3.06 -3.99 -5.93 -5.8 -5.37 -5.27 -1.16 0.32 -0.13 -2.45 -2.74 -1.25
-9.77 -3.47 - 1.39 0.63 -4.75 -0.88 -0.41 - - -10.97 -2.16 - 0.2 - - 2.06 - - -11.88 -8.39 - - - - - - - - - - - - - - - - - - -5.65 - -4.44 -3.56 3.63 3.77 3.55 - - -
- 4.38 - - - - - - - - - - - - - - 4.71 1.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.06 -3.46 - -1.69 2.56 -1.57 -4.76 -5.76 - - -2.64 4.53 -2.39 2.33 - - 3.76 -2.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.45 0.16 -2.43 - -2.25 - 1.53 0.69 -0.82 1.67 1.44 -3.51 1.24 1.83 -0.46 -0.72 1.16 1.76 -1.36 0.63 -1.52 -1.33 -2.02 -1.45 1.06 1.56 2.25 -2.09 -2.23 -0.79 -1.46 -1.26 -3.96 - - -1.04 -1.57 -3.43 -1.8 -4.05 -2.25 -2.64 -4.6 1.15 1.5 0.46 -2.27 - -3.01
0.94 0.85 -1.68 -6.98 -5.4 -2.22 2.75 3.08 1.08 -0.43 -0.29 1.44 1.39 1.89 -1.16 -2.28 2.13 1.06 -1.33 -1.84 -1.99 -2.07 -1.71 -1.85 -2.54 -2.57 0.4 -1.98 -2.17 -1.82 -1.76 -1.39 -2.21 -4.01 -3.1 -2.67 -1.91 -2.25 -2.47 -2.64 -1.62 -1.66 -1.26 -1.69 -0.0 -0.32 -2.49 -3.16 -3.76
1.23 3.69 - - - - - - 1.39 - -1.24 - - 3.23 3.04 - 2.03 -0.85 - 0.66 - - - -2.38 - - - - - - - - - - - - - - - - - - - -1.99 1.49 1.85 - - -
0.82 0.37 0.07 -0.15 -0.51 -5.39 0.68 0.88 -1.45 0.2 -0.22 -0.96 1.67 1.13 -0.47 1.03 1.77 0.59 1.92 1.05 -2.13 -5.03 -2.2 -2.57 -1.65 - - - -1.28 -2.81 -2.62 -2.01 - - -2.18 -1.62 - -0.88 -0.81 -2.58 -2.24 -2.57 -2.38 1.56 2.01 1.73 -1.03 0.55 0.53
-2.13 -0.99 -2.94 -1.73 -2.65 2.15 0.07 -0.73 1.26 -2.71 -1.21 -2.71 -3.61 -2.79 -1.76 -1.23 -1.85 0.91 -1.86 0.34 1.18 1.3 0.99 1.36 -3.21 -0.62 -3.82 -1.03 0.17 -0.66 -0.71 -1.56 0.96 -1.13 1.18 1.78 1.19 1.58 1.86 -0.32 -1.8 -1.09 -1.93 -2.9 -6.07 -2.65 -2.29 -0.61 -1.0
-3.62 -2.32 -3.94 -4.16 -4.24 0.88 -1.79 -2.26 -0.86 -4.14 -2.57 -3.5 -3.0 -3.73 -3.78 -2.78 -3.76 -0.42 - -1.05 1.55 1.69 1.56 1.93 -3.34 -1.78 -5.57 0.24 0.55 -0.59 -2.38 -1.46 1.66 -1.62 1.37 1.69 1.77 2.92 1.67 0.28 -1.12 -0.52 -1.95 -4.74 - -4.73 -4.13 -2.76 -3.9
-2.3 -2.36 -6.02 -4.66 -4.02 0.21 -6.17 -6.55 -2.47 -3.8 -2.2 1.11 -4.72 1.39 -0.07 0.35 0.81 -0.27 0.74 1.35 0.26 1.18 1.49 2.2 -1.74 -0.28 0.43 -0.96 -0.48 -1.07 -1.39 -1.39 -1.0 -1.29 -0.06 1.4 0.39 0.18 0.94 -0.88 -0.1 -3.18 -1.89 0.15 0.85 1.45 -1.39 -1.53 -4.82
- 4.89 - - - - - - - - - - - - - - - - - 4.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.77 -3.58 -6.42 - - - - - - - 0.83 -1.05 - 2.29 - - 1.75 -4.27 -24.41 - - - - - - -5.39 - - - - - - - - - - - - - - - - - -5.4 - 2.3 -0.95 4.12 3.95
-6.25 -2.19 -6.57 0.43 0.99 4.46 -0.78 -0.58 -1.01 0.44 0.7 - - 3.54 - - 2.8 -7.85 - -5.94 -7.72 -9.35 - -8.75 -4.26 - - - - - - - - - - - - - - - -9.3 - - -9.83 -5.97 - - - -
1.07 1.02 1.18 -4.63 2.7 0.53 3.22 2.6 -3.18 2.56 1.09 -6.35 -5.31 -2.01 - - 1.41 0.42 - 1.18 -9.64 -10.25 -8.01 -10.23 -1.53 -6.59 -6.34 - -5.24 - - - - - -6.11 - - - -4.97 - -8.59 - -8.07 1.96 -4.89 -2.68 - -6.82 -6.58
-0.18 1.29 - - - 2.94 0.84 0.57 2.36 -2.81 -2.35 -0.15 2.35 2.78 - - 3.19 0.03 - 1.41 - -2.92 - - - - - - - - - -1.39 - - - - - - - - - - - -3.65 - 0.51 - - 0.61
- -4.48 - -4.54 - -3.23 - -1.46 -5.0 -7.71 -0.94 -1.4 - - - - 2.64 -5.86 -15.49 -3.62 -0.66 -1.95 1.21 -2.97 - - - - - -1.92 0.65 1.86 -24.8 -3.02 1.07 -2.19 - 1.31 -1.07 -1.08 -2.83 -0.46 -0.3 4.47 1.0 -0.96 -12.33 -2.9 -
- 3.09 - - - - - - - - 2.54 - - - - - - 0.83 - 5.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.25 1.89 1.07 -3.94 0.72 -1.99 1.97 2.08 - 0.88 0.52 - -6.5 - - - 0.24 -2.4 - -0.7 -6.52 -5.33 -4.34 -5.28 -3.75 - - -6.17 -4.6 - -7.45 -5.73 -5.02 -4.71 - -6.2 - -6.65 - -7.95 -6.24 -7.43 -5.73 -0.19 - - 2.35 3.01 3.46
-2.15 - - - - - - -0.51 - - -1.1 - - 4.43 - - 4.68 - - - - - - - - - - - - - - - - - - - - - - - - - - -1.2 - - - - -
-4.94 -0.13 -5.57 -5.55 -4.49 -0.01 0.13 0.29 -0.96 -1.2 -2.25 0.19 0.49 0.31 1.76 1.35 -2.77 0.9 -1.87 1.31 -0.26 -0.44 -0.19 -0.35 -0.09 1.05 2.37 0.0 -0.85 -1.37 -1.28 -0.09 -0.38 -1.37 -0.35 -0.06 -1.1 -0.3 -0.18 0.01 0.76 0.67 1.01 -0.15 -1.9 -0.71 -0.22 -2.44 -3.67
-2.8 3.12 -1.62 - 3.44 - - -0.23 - - -2.7 - 3.63 3.15 - - 1.03 1.18 - 0.26 - -3.68 -3.12 0.02 - - - - - - - - - - - - - - - - - - - - - - - - -
-3.31 -0.85 -6.98 - - - -0.27 0.77 -1.77 0.78 -0.22 -1.4 -0.91 0.74 2.14 2.27 0.99 2.48 - 1.04 -2.69 -2.91 -2.96 -3.07 -1.7 0.1 1.6 -0.91 -1.81 -4.13 -5.17 -2.22 -2.1 -3.73 -2.92 -4.27 -5.33 -4.05 -5.43 -5.97 -4.32 -8.18 -5.51 2.07 2.65 2.01 -2.42 -4.64 -
0.25 0.56 1.03 -3.71 -1.16 4.17 -2.23 -2.97 2.39 - -0.76 - -2.67 -2.35 - - 2.56 -1.62 - -1.37 -5.39 - - -3.87 -0.05 - - -1.11 - - - -3.25 -1.29 - - - - - - -4.29 -2.88 - - -2.45 -1.96 0.96 1.52 1.56 1.18
-1.32 0.69 -2.61 -6.03 -7.13 -1.33 1.69 1.92 0.0 -0.07 0.3 0.87 1.02 1.56 -0.41 -2.3 0.88 1.43 1.74 -0.61 -2.54 -2.09 -1.91 -2.17 -0.4 -2.59 -0.76 -2.36 -3.38 -3.68 -2.6 -2.03 -3.98 -3.21 -3.65 -1.91 -2.71 -2.3 -2.2 -5.68 -4.62 -3.67 -4.0 2.56 1.93 1.73 0.47 -0.13 -3.06
1.49 -1.33 -3.08 -5.96 - -2.69 - -3.62 -3.99 -4.46 -2.05 -2.49 0.08 0.73 -1.86 - -4.75 -1.44 0.33 -1.13 0.12 -3.46 0.54 -4.29 0.39 -3.39 - -0.54 0.13 1.17 1.15 2.02 0.09 -2.67 -0.35 0.85 0.88 1.46 0.9 1.25 2.19 1.17 2.37 -1.42 - - -1.65 - -3.68
-4.95 -1.87 -1.79 - - - - -3.21 - - -5.87 1.97 1.16 - - - - -0.19 - -3.09 -1.32 -2.66 -1.09 -0.58 - - - - -0.63 0.84 0.92 -3.5 - 1.15 -0.37 1.21 1.02 2.04 1.43 0.81 1.37 2.44 2.13 1.55 1.86 -2.65 - - -
-3.75 -2.58 -2.07 - -3.3 - - -3.24 -2.9 - -4.3 2.44 0.19 -1.94 - - - 0.29 - -5.19 -1.98 -3.2 -1.7 -2.32 - -2.24 - -1.8 1.86 0.88 0.88 -0.9 - -0.62 -0.19 0.54 -0.46 1.6 1.04 0.54 1.54 2.48 2.18 1.78 1.96 -2.31 - - -
-4.66 -1.43 - -3.28 -2.35 3.31 -3.29 -3.42 0.9 -7.7 -2.05 2.05 1.84 2.43 - - 1.96 2.72 - -2.02 -0.81 -0.17 -0.53 0.08 0.92 -2.54 - -0.58 -0.4 -0.61 -2.33 -0.16 -1.12 -1.19 -0.91 -0.95 -1.09 -0.49 -1.93 -6.02 -5.13 -4.08 -3.08 -5.34 -3.22 - - - -
-1.6 2.98 1.31 - - - -0.95 -1.81 0.76 -1.51 -0.85 - 1.57 3.3 - - 2.69 2.13 - -5.94 -1.86 -2.34 - - - - -0.21 - 1.02 - - - - - - - - - - -1.73 -2.88 -2.67 - -2.96 - -0.65 -0.34 1.94 0.88
0.84 3.94 - - - - - - - - - - - - - - - - - 2.16 - - 0.69 1.59 - - - - - - - 3.23 - - - - - - - - - - - 0.9 - 3.52 - - -
-2.32 1.16 -4.25 -7.97 -9.07 -8.12 1.01 2.47 1.91 -2.88 -1.8 -0.68 0.11 0.26 0.0 0.48 0.78 1.47 0.7 -0.28 -0.18 0.38 -0.52 -0.24 -0.93 0.86 -0.56 0.48 0.67 -1.26 -0.95 -1.09 -0.13 -0.98 -0.19 0.04 -0.47 -0.84 -0.79 -2.15 -2.54 -2.69 -2.86 -0.81 1.83 -0.74 -0.56 -3.38 -6.61
-0.47 0.18 -1.47 -5.34 - -2.16 1.1 1.38 1.06 -2.37 -0.56 - -0.81 -0.5 1.25 1.92 2.3 0.24 0.4 -0.73 0.61 -5.84 -9.31 -6.01 -1.2 - - 1.27 0.66 1.29 1.17 2.03 0.81 -0.22 -0.7 0.12 -1.87 -0.02 -0.09 -2.71 -1.35 -1.62 -1.48 -1.93 - - -1.28 -2.24 -
-5.48 1.52 -7.58 - - - 1.39 1.62 -0.7 -0.73 -1.84 -0.1 1.54 1.32 -0.29 -0.27 -1.17 1.07 -4.33 0.35 -0.11 -6.02 -0.01 0.51 0.26 0.34 -0.07 0.02 -0.58 0.06 -0.49 0.21 -0.02 -0.57 -0.21 0.32 -0.2 0.44 -0.08 -0.29 0.44 0.68 0.86 -0.58 -0.28 -0.55 -1.3 -1.11 -3.26
-0.81 1.73 - - - - 3.36 3.17 - -0.87 -3.13 - - - - - 4.3 1.91 - -4.39 - - - - - - - - - - - - - - - - - - - - - - - 0.72 - - - - -
-2.34 1.46 -4.08 - - -0.68 3.0 2.75 2.08 - -3.25 0.64 1.59 2.9 0.05 - 2.47 1.11 - - -2.32 -1.95 -1.97 -0.68 - - - -0.84 - - - -0.59 - - - -1.09 - 1.3 - - - - - - - - - - -
-1.85 0.32 -1.76 -4.44 -3.94 -1.13 -3.95 -2.92 -1.98 -3.94 0.79 0.07 3.46 3.37 -2.03 -1.86 3.4 0.27 - -1.04 -0.96 -6.04 -1.03 -5.1 - -3.3 -4.21 -1.5 -0.83 -1.4 -1.83 -2.25 -1.31 -3.64 - -1.01 -2.41 -2.57 - -2.46 -2.92 -1.54 -3.34 -0.51 -0.58 -0.91 0.91 -3.01 -2.12
0.03 1.06 0.15 1.55 2.03 0.54 0.48 1.05 0.13 -0.17 0.24 0.83 0.94 1.33 -7.67 -6.03 1.86 -0.26 - -0.46 -2.41 -8.4 -5.19 -7.07 -2.04 -5.25 -6.61 -2.85 -2.52 -2.72 -2.77 -2.38 -2.69 -3.19 -2.11 -1.95 -2.43 -2.31 -2.52 -3.05 -2.77 -2.63 -2.45 1.79 1.57 2.36 0.63 0.31 -0.52
-5.32 -1.6 -6.24 -5.33 - - -4.94 -5.68 1.35 -8.99 -1.07 -3.47 0.53 3.97 0.95 0.94 2.47 2.28 -0.1 -1.37 -0.45 -1.08 -0.13 -1.17 1.87 - - -1.76 -1.51 -2.11 -1.87 -1.04 -1.06 -1.62 -0.76 -0.9 -0.38 -0.5 -0.39 -3.5 -4.3 -5.28 -4.96 -2.18 -3.32 -3.25 -3.77 - -5.92
-0.33 1.24 -0.24 -0.07 -2.88 -3.29 0.4 0.27 0.32 -0.87 0.66 -0.95 1.67 2.4 - - 2.24 2.55 0.66 -0.72 -1.7 -2.81 -1.84 -2.63 -2.11 -4.13 -6.05 -0.96 -0.82 -0.97 -2.06 -0.07 -1.51 -3.82 -2.47 -1.83 -2.69 -2.5 -2.68 -4.55 -3.09 -3.37 -2.6 0.35 0.14 1.64 0.47 1.55 -0.7
2.1 2.06 0.92 -0.54 -2.14 -1.48 2.14 2.27 1.48 -1.4 1.23 -5.28 0.24 0.92 - - 2.87 -0.09 - -0.76 -7.66 - -6.77 -6.23 - -2.24 -2.81 -3.43 - - - -5.34 - - - - - - - -7.02 -7.36 - -6.49 0.77 -3.12 - 0.71 2.12 1.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.