Heatmap: Cluster_222 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00237020 (evm_27.TU.AmTr_v1.0_scaffold00002.283)
0.57 -4.31 0.25 0.36 1.23 -0.58 -1.35 -2.48 -1.58 -1.45 -0.23 0.8 0.48 -0.27 -0.26 -0.03 -0.98 0.28 0.66 0.56 0.41 -0.01
AMTR_s00004p00036050 (evm_27.TU.AmTr_v1.0_scaffold00004.17)
-0.46 -1.36 -2.13 -0.21 1.55 - -1.63 -7.02 -0.93 -0.61 -0.05 0.23 0.81 0.01 0.91 -0.24 -0.79 0.02 1.13 1.03 -0.24 0.06
AMTR_s00004p00062150 (evm_27.TU.AmTr_v1.0_scaffold00004.44)
-2.28 -3.81 -0.78 -7.53 1.14 - -0.69 - -1.71 -1.31 0.33 0.59 1.4 1.13 0.93 -1.11 -0.53 0.03 0.11 1.34 -0.89 0.83
AMTR_s00007p00265900 (evm_27.TU.AmTr_v1.0_scaffold00007.364)
-0.11 - 0.37 0.51 1.23 - -2.69 -8.14 -2.86 -2.74 0.58 0.58 0.71 -0.25 0.54 0.32 0.09 0.54 0.84 -0.04 0.0 0.14
AMTR_s00009p00265750 (evm_27.TU.AmTr_v1.0_scaffold00009.386)
-0.69 - - 0.87 1.49 - -4.85 - -2.35 -2.66 0.61 1.08 1.0 -0.13 -0.01 -0.25 0.35 0.12 1.01 0.59 -0.04 0.15
AMTR_s00012p00158080 (evm_27.TU.AmTr_v1.0_scaffold00012.95)
- -0.72 - -8.08 0.87 - -1.26 - -1.17 -0.68 0.93 1.1 1.21 0.32 0.74 -1.66 0.07 0.43 0.76 1.28 -0.16 0.09
AMTR_s00012p00212320 (evm_27.TU.AmTr_v1.0_scaffold00012.149)
0.54 -0.8 -1.02 0.6 0.93 -1.78 -2.58 -3.56 -2.27 -2.38 0.83 0.63 0.41 -0.42 -0.27 0.02 0.25 0.44 0.84 0.66 -0.32 0.22
AMTR_s00012p00261580 (evm_27.TU.AmTr_v1.0_scaffold00012.325)
0.48 1.89 0.19 -2.44 -0.12 0.08 -0.07 -2.55 -0.71 -0.66 -0.04 0.46 0.02 -0.42 0.39 -0.43 0.03 -0.32 -0.48 -0.29 -0.35 -0.14
AMTR_s00013p00224050 (evm_27.TU.AmTr_v1.0_scaffold00013.163)
0.95 0.99 - - 1.1 -4.43 -3.69 - -4.07 -3.63 0.92 1.16 -0.35 -1.05 -0.75 0.11 0.38 0.98 0.98 -0.35 0.63 0.02
AMTR_s00013p00234790 (evm_27.TU.AmTr_v1.0_scaffold00013.188)
0.73 0.62 -1.93 -0.3 0.4 -0.1 -0.52 -4.36 -1.17 -1.13 0.58 0.7 0.32 -0.35 -0.09 0.03 0.99 -0.4 -0.0 0.3 -0.63 0.14
AMTR_s00017p00242470 (evm_27.TU.AmTr_v1.0_scaffold00017.218)
-0.07 -0.19 1.25 0.7 1.22 -4.84 -2.02 -7.09 -2.28 -1.99 -0.1 0.27 0.25 -0.27 0.09 -0.08 -0.51 0.58 0.37 0.27 0.35 -0.1
AMTR_s00018p00172190 (evm_27.TU.AmTr_v1.0_scaffold00018.95)
0.69 -1.36 -0.64 0.59 1.07 -4.16 -2.07 -2.98 -1.41 -1.45 0.82 0.58 0.88 0.14 -0.16 -0.8 0.67 0.46 0.36 -0.04 -0.44 -0.07
AMTR_s00018p00189350 (evm_27.TU.AmTr_v1.0_scaffold00018.105)
-0.89 -0.84 -0.83 0.25 0.58 -1.72 -0.33 -0.97 -0.68 -0.56 0.23 0.32 1.15 0.59 0.68 -0.65 -0.55 0.18 0.33 0.34 -0.75 0.5
AMTR_s00018p00243590 (evm_27.TU.AmTr_v1.0_scaffold00018.151)
-1.41 - 0.72 -3.68 0.75 -4.32 -2.4 -6.55 -0.94 -0.93 0.74 0.73 0.52 0.61 -0.2 1.4 -0.8 1.31 1.09 -0.36 -0.9 -0.7
AMTR_s00020p00243740 (evm_27.TU.AmTr_v1.0_scaffold00020.111)
- 0.1 - 0.27 1.62 - -1.4 - -0.37 -0.89 0.51 -0.3 1.09 -0.04 0.33 -0.55 -0.14 0.09 1.05 0.54 -1.07 0.76
AMTR_s00021p00216250 (evm_27.TU.AmTr_v1.0_scaffold00021.196)
-0.79 1.72 0.45 -4.4 0.71 0.17 -4.69 -7.67 -3.87 -3.53 0.37 0.84 0.34 -0.1 -0.71 0.71 0.15 -0.11 0.53 -0.46 0.09 -0.05
AMTR_s00021p00221940 (evm_27.TU.AmTr_v1.0_scaffold00021.211)
0.14 -0.07 - 0.77 -0.08 - -2.68 - -3.11 -2.33 0.81 0.72 1.22 0.11 -0.44 -0.85 -0.07 0.52 1.05 1.1 -0.95 0.69
AMTR_s00022p00224350 (evm_27.TU.AmTr_v1.0_scaffold00022.283)
- - - -6.28 0.82 - -0.78 - -0.51 -0.83 0.23 0.77 1.0 1.27 0.89 0.21 -0.27 1.28 -0.23 1.05 -1.99 0.71
AMTR_s00025p00114450 (evm_27.TU.AmTr_v1.0_scaffold00025.103)
0.36 -0.05 0.47 -0.92 0.7 0.1 -1.49 -1.73 -0.73 -0.88 0.27 0.34 0.35 -0.13 0.81 -0.68 0.4 -0.06 -0.15 0.19 -0.08 0.05
AMTR_s00029p00218490 (evm_27.TU.AmTr_v1.0_scaffold00029.328)
-0.56 -1.77 -1.91 -3.36 0.12 -1.1 -1.05 -1.4 -0.77 -0.63 0.66 0.45 0.87 0.61 1.2 -0.52 -0.84 0.25 0.97 0.93 -0.38 0.43
AMTR_s00030p00070290 (evm_27.TU.AmTr_v1.0_scaffold00030.32)
0.55 0.15 -1.01 -1.58 0.12 0.33 -2.89 - -3.47 -3.74 0.35 0.93 0.63 -0.32 0.06 0.92 0.47 0.1 0.21 0.67 -0.17 0.47
AMTR_s00030p00213170 (evm_27.TU.AmTr_v1.0_scaffold00030.158)
-1.3 0.04 -2.96 0.97 0.83 -3.2 -0.35 -1.62 -0.55 -0.89 -0.93 -1.55 0.45 1.02 0.88 -0.46 -0.52 -0.12 0.3 1.13 -0.06 0.54
AMTR_s00038p00097730 (evm_27.TU.AmTr_v1.0_scaffold00038.49)
-1.41 -1.3 -0.55 -1.33 0.56 -1.31 -0.44 -5.22 -1.45 -1.05 0.5 0.44 0.58 0.64 0.43 0.22 0.55 1.25 0.76 -0.06 0.0 -0.29
AMTR_s00045p00232830 (evm_27.TU.AmTr_v1.0_scaffold00045.342)
-0.87 -0.37 0.19 0.16 1.18 - -4.71 -5.62 -2.38 -2.83 0.56 0.05 0.9 0.2 1.13 -0.44 0.65 0.48 0.08 0.01 -1.06 0.85
AMTR_s00046p00223070 (evm_27.TU.AmTr_v1.0_scaffold00046.159)
-0.62 0.81 0.18 -8.25 0.96 0.91 -1.07 -2.48 -1.77 -1.75 0.94 1.12 -0.17 -0.33 -0.48 0.09 0.21 0.35 0.22 -0.51 -0.71 -0.12
AMTR_s00047p00213630 (evm_27.TU.AmTr_v1.0_scaffold00047.155)
0.55 -0.29 -0.35 -0.47 1.0 -4.07 -2.03 - -1.76 -1.88 0.66 0.64 0.96 -0.16 -0.16 -0.52 0.89 0.41 0.35 0.27 -0.78 0.62
AMTR_s00047p00223950 (evm_27.TU.AmTr_v1.0_scaffold00047.176)
0.91 - - 0.7 0.74 - -3.24 -7.09 -3.45 -3.19 0.79 1.06 0.84 0.1 -0.09 0.4 0.2 0.23 0.65 0.62 -0.05 0.26
AMTR_s00049p00202750 (evm_27.TU.AmTr_v1.0_scaffold00049.218)
0.28 - - 1.14 0.91 - -5.74 - -4.68 -5.3 0.94 0.99 1.1 -0.25 0.31 -1.02 -0.09 0.17 0.46 0.8 -0.86 1.19
AMTR_s00054p00193530 (evm_27.TU.AmTr_v1.0_scaffold00054.73)
- - - -1.53 1.14 - -6.38 - -3.57 -3.14 1.83 1.17 0.55 0.17 -0.7 -0.27 0.77 0.1 0.93 0.47 1.49 -0.88
AMTR_s00055p00184890 (evm_27.TU.AmTr_v1.0_scaffold00055.106)
0.56 1.14 -0.27 -1.37 0.86 0.44 -2.38 -8.82 -2.34 -2.23 0.42 0.34 0.15 -0.26 -0.24 -0.04 0.01 0.53 0.18 0.44 0.31 -0.38
AMTR_s00056p00156750 (evm_27.TU.AmTr_v1.0_scaffold00056.133)
0.25 0.53 0.01 -2.56 0.78 0.17 -1.82 -2.16 -2.0 -2.04 0.33 0.47 0.47 0.01 0.5 -0.65 1.15 0.24 0.15 0.02 -0.37 -0.03
AMTR_s00057p00109670 (evm_27.TU.AmTr_v1.0_scaffold00057.87)
0.62 1.31 0.44 -1.03 0.64 0.56 -0.59 -2.65 -0.62 -0.87 0.65 0.33 -0.02 -0.19 -0.07 -0.91 0.16 0.08 0.14 -0.81 -1.81 -0.33
AMTR_s00058p00071840 (evm_27.TU.AmTr_v1.0_scaffold00058.32)
0.63 0.72 -0.18 -0.86 0.69 0.32 -3.59 -3.14 -2.79 -2.76 0.59 0.22 0.99 0.29 -0.03 -0.06 0.43 0.27 -0.01 -0.04 -0.84 0.17
AMTR_s00062p00043970 (evm_27.TU.AmTr_v1.0_scaffold00062.24)
- - - -3.68 -0.81 - -3.6 - -4.49 -5.14 0.97 0.79 1.06 0.9 0.98 0.52 1.46 0.97 1.07 -0.01 0.59 -0.26
AMTR_s00064p00167250 (evm_27.TU.AmTr_v1.0_scaffold00064.70)
-2.64 -3.95 -4.79 1.22 1.1 - -1.86 -2.75 -1.23 -1.28 0.82 0.73 0.36 -0.76 1.02 0.46 0.07 0.38 0.32 0.39 0.6 -0.22
AMTR_s00066p00155040 (evm_27.TU.AmTr_v1.0_scaffold00066.159)
- - 0.52 -5.14 1.13 - -3.1 - -1.31 -1.81 0.64 0.37 0.85 0.78 0.65 -0.05 0.13 0.71 0.04 1.2 0.12 0.56
AMTR_s00077p00119170 (evm_27.TU.AmTr_v1.0_scaffold00077.109)
- -1.96 - 0.65 0.84 - -1.16 - -2.1 -1.42 0.79 1.4 1.3 -0.07 -0.27 1.16 - 0.21 0.05 0.94 0.05 0.41
AMTR_s00078p00097110 (evm_27.TU.AmTr_v1.0_scaffold00078.68)
0.1 -0.03 -0.08 -0.25 0.94 -0.87 -1.3 -2.08 -0.74 -0.63 0.33 0.4 0.78 0.43 0.0 -0.28 -0.21 0.01 0.3 0.35 -0.45 0.31
AMTR_s00079p00174970 (evm_27.TU.AmTr_v1.0_scaffold00079.92)
0.08 -0.56 -0.81 -4.72 0.88 0.72 -3.42 -7.52 -3.22 -3.29 0.67 0.76 0.63 0.15 -0.35 -0.31 0.57 -0.35 0.65 0.62 0.75 0.35
AMTR_s00091p00083260 (evm_27.TU.AmTr_v1.0_scaffold00091.30)
- 0.21 -1.54 0.54 0.99 -5.75 -1.71 -2.08 -2.39 -2.01 -0.0 0.01 1.07 0.97 0.44 -0.08 0.87 0.23 0.3 0.75 -0.06 -0.3
AMTR_s00099p00109140 (evm_27.TU.AmTr_v1.0_scaffold00099.92)
0.07 1.41 0.26 -4.82 0.16 -0.27 -3.35 - -3.34 -3.44 0.47 0.33 0.43 0.47 0.75 0.21 0.37 -0.2 -0.06 0.35 -0.28 0.45
AMTR_s00100p00080720 (evm_27.TU.AmTr_v1.0_scaffold00100.21)
-1.28 -1.97 -1.38 -0.01 0.51 - 0.4 -1.38 -0.1 0.2 0.69 0.93 0.83 0.05 -0.46 0.03 0.25 -0.34 0.37 0.26 -0.5 0.57
AMTR_s00101p00122520 (evm_27.TU.AmTr_v1.0_scaffold00101.97)
-0.19 -0.64 -0.93 -1.34 -0.57 -0.39 0.14 -1.75 -0.52 -0.09 0.28 0.19 0.63 0.6 1.14 -0.04 -1.46 -0.36 0.93 0.77 -0.54 0.06
AMTR_s00109p00142250 (evm_27.TU.AmTr_v1.0_scaffold00109.153)
-0.98 -0.33 -0.17 1.31 1.19 - -5.14 -6.19 -4.12 -3.95 0.58 -2.09 1.36 0.28 0.87 0.58 -2.79 -0.73 0.45 1.12 -2.58 0.67
AMTR_s00113p00102610 (evm_27.TU.AmTr_v1.0_scaffold00113.20)
- - - 2.18 2.36 - - - - - -0.75 -0.96 1.42 -0.54 0.04 - 0.87 -0.16 0.65 1.1 -1.31 -
AMTR_s00118p00111160 (evm_27.TU.AmTr_v1.0_scaffold00118.22)
- - - - 1.47 - -5.45 - -2.59 -3.32 1.24 1.94 0.33 -1.15 -0.27 -1.62 1.07 0.8 0.66 -0.01 0.59 0.96
AMTR_s00118p00111210 (evm_27.TU.AmTr_v1.0_scaffold00118.23)
- - - - 1.74 - -4.46 - -3.37 -3.86 1.49 1.5 0.71 -0.95 -0.55 -0.39 0.57 0.98 0.89 0.12 -1.17 1.25
AMTR_s00131p00112900 (evm_27.TU.AmTr_v1.0_scaffold00131.83)
- - - -1.13 1.14 - -1.09 - -1.62 -0.9 0.59 0.81 0.98 1.17 0.25 -1.63 0.26 0.86 1.14 0.94 -0.68 0.33
AMTR_s00141p00064230 (evm_27.TU.AmTr_v1.0_scaffold00141.16)
- 0.22 - 0.16 0.9 -5.37 -1.21 -6.79 -1.3 -1.31 0.37 0.4 0.97 1.08 1.0 0.05 -1.16 -0.13 0.39 0.86 0.16 0.34
AMTR_s00146p00024230 (evm_27.TU.AmTr_v1.0_scaffold00146.6)
-1.26 2.01 1.09 -2.46 0.66 0.67 -1.52 -7.69 -1.51 -1.46 0.59 -0.2 0.14 -0.15 0.11 -0.18 -0.18 -0.45 -0.37 -0.26 -0.51 -0.41
AMTR_s00156p00017410 (evm_27.TU.AmTr_v1.0_scaffold00156.3)
-0.51 0.62 0.82 0.36 0.64 -0.09 -2.6 -6.88 -0.55 -0.79 0.26 0.61 0.59 -0.23 0.74 -0.66 -0.85 -0.29 0.34 0.03 -0.87 0.25
AMTR_s00157p00061790 (evm_27.TU.AmTr_v1.0_scaffold00157.30)
-0.22 0.99 0.06 -5.91 0.57 0.22 -2.38 -8.71 -2.63 -2.53 0.74 0.87 0.51 0.62 0.28 -0.01 0.43 0.29 0.15 0.06 -1.16 0.12
AMTR_s00168p00045970 (evm_27.TU.AmTr_v1.0_scaffold00168.12)
0.64 0.75 -0.0 0.35 0.61 -1.4 -0.77 -0.59 -0.53 -0.42 0.49 -0.24 0.65 0.02 0.19 -0.89 0.52 -0.54 -0.33 -0.26 -1.67 0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.