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Heatmap: Cluster_207 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00256810 (evm_27.TU.AmTr_v1.0_scaffold00001.341)
 - - - - - - -1.11 - - - - - 2.04 2.67 0.8 - - - - -0.23 - 3.08
AMTR_s00001p00256830 (evm_27.TU.AmTr_v1.0_scaffold00001.343)
 - - - - -0.67 - - - -3.43 - 0.35 1.1 1.98 1.96 -0.68 0.53 1.0 0.91 - -0.15 - 1.67
AMTR_s00001p00269250 (evm_27.TU.AmTr_v1.0_scaffold00001.434)
 - - 4.28 - - - - - - - - - - - 1.39 - - - - - - -
AMTR_s00005p00232040 (evm_27.TU.AmTr_v1.0_scaffold00005.112)
 - - - -0.77 - - -4.99 - -2.45 -1.93 0.79 1.15 1.25 0.82 0.94 1.32 -0.58 0.37 0.21 1.47 0.21 0.48
AMTR_s00008p00133760 (evm_27.TU.AmTr_v1.0_scaffold00008.60)
 - - - - 3.22 - - - 3.31 - - - - - 1.44 - - - - - - -
AMTR_s00008p00147830 (evm_27.TU.AmTr_v1.0_scaffold00008.72)
 - - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00013p00189840 (evm_27.TU.AmTr_v1.0_scaffold00013.120)
 - - - - 3.04 - - - -0.46 0.18 - - 1.71 1.24 2.65 - - - - - - -
AMTR_s00015p00091900 (evm_27.TU.AmTr_v1.0_scaffold00015.21)
 - - - - 0.59 - -2.89 - -1.31 -1.27 1.56 1.38 0.16 0.15 0.24 0.81 1.89 0.6 -0.24 0.39 -0.55 -0.4
AMTR_s00022p00246590 (evm_27.TU.AmTr_v1.0_scaffold00022.367)
 - -2.85 0.5 - -0.3 - - - -2.14 -2.8 0.99 1.04 1.38 -1.75 1.67 -0.52 -2.1 -0.15 0.78 -3.39 - 2.46
AMTR_s00027p00058840 (evm_27.TU.AmTr_v1.0_scaffold00027.11)
 - - - - 1.3 - -2.83 - -3.27 -0.7 - - -1.62 0.86 -1.53 1.95 0.53 - - 1.25 2.17 2.0
AMTR_s00027p00246860 (evm_27.TU.AmTr_v1.0_scaffold00027.158)
 1.36 - - - -3.97 - -0.75 - 0.81 0.85 1.13 2.44 -0.29 -2.65 -1.05 - 0.94 1.5 0.16 -2.31 - -3.74
AMTR_s00028p00229290 (evm_27.TU.AmTr_v1.0_scaffold00028.112)
 - - - - 3.0 - 0.89 - - - - - 0.56 0.33 1.26 - - - - 2.81 - -
AMTR_s00033p00140510 (evm_27.TU.AmTr_v1.0_scaffold00033.77)
 - -0.99 - 1.2 -0.67 - -1.46 - -0.54 -0.65 1.63 0.42 -0.39 0.09 1.65 -0.47 -0.49 0.49 -0.04 1.13 -2.25 0.38
AMTR_s00033p00161180 (evm_27.TU.AmTr_v1.0_scaffold00033.107)
 - - - - -2.24 - - - - -3.02 2.59 - 1.54 0.5 - - 1.42 2.22 - -0.39 - 1.69
AMTR_s00033p00161210 (evm_27.TU.AmTr_v1.0_scaffold00033.108)
 - - - - 0.98 - -4.46 - -2.09 -1.85 2.04 1.54 0.59 -0.03 -0.95 0.39 1.36 0.76 -0.4 0.83 - 0.43
AMTR_s00033p00190860 (evm_27.TU.AmTr_v1.0_scaffold00033.146)
 - - - - 1.82 - -2.83 - -1.46 -2.52 2.82 2.59 -0.03 - -2.14 - 1.79 - - - - -
AMTR_s00038p00213270 (evm_27.TU.AmTr_v1.0_scaffold00038.173)
 - - - - - - - - - - - - 1.04 - 1.67 - 4.07 - - - - -
AMTR_s00041p00089040 (evm_27.TU.AmTr_v1.0_scaffold00041.56)
 - - - 2.53 - - - - 0.73 -0.56 - - -1.09 -0.33 1.26 - - - 1.51 2.45 - 0.91
AMTR_s00046p00166110 (evm_27.TU.AmTr_v1.0_scaffold00046.89)
 - - - -1.56 -2.44 - -2.19 - -0.83 -1.25 2.09 - 0.71 -2.16 -0.78 - 1.57 2.1 - 0.79 0.94 1.43
AMTR_s00046p00191180 (evm_27.TU.AmTr_v1.0_scaffold00046.115)
 - - - 2.97 2.76 - - - 1.81 - - - - - 1.96 - - - - - - -
AMTR_s00048p00121560 (evm_27.TU.AmTr_v1.0_scaffold00048.64)
 - - - -2.27 - - -4.21 - -3.66 -2.2 -0.23 - 2.07 -0.14 -0.38 1.08 - - 2.43 1.0 1.3 1.45
AMTR_s00050p00132660 (evm_27.TU.AmTr_v1.0_scaffold00050.31)
 - - - - 0.97 - - - - - 2.84 1.64 -0.92 -1.87 1.93 - -0.5 - - 1.54 - 0.63
AMTR_s00053p00018670 (evm_27.TU.AmTr_v1.0_scaffold00053.3)
 - - - - 1.64 - - - - - - - 0.63 - 2.14 - - - 3.69 - - -
AMTR_s00054p00049180 (evm_27.TU.AmTr_v1.0_scaffold00054.17)
 - - - - 0.45 - -1.25 - 0.93 0.83 0.48 1.31 -0.22 -0.82 0.14 - 1.5 2.7 - -1.17 - -1.54
AMTR_s00054p00124330 (evm_27.TU.AmTr_v1.0_scaffold00054.39)
 - - - - -1.13 - -2.95 - -2.07 - - 1.81 -0.57 -0.52 1.76 - -0.33 1.61 2.1 -0.96 1.46 0.6
AMTR_s00057p00218690 (evm_27.TU.AmTr_v1.0_scaffold00057.281)
 - - - - 1.49 - 0.87 - 0.64 0.41 0.37 - -2.41 -0.88 -0.86 - 2.09 - - 0.17 1.8 1.6
AMTR_s00060p00138350 (evm_27.TU.AmTr_v1.0_scaffold00060.77)
 -1.26 - - -0.29 -1.89 - -1.69 - -0.19 -1.14 1.63 1.34 -0.14 0.44 -0.34 0.19 1.02 1.56 -0.6 1.0 -0.59 -0.49
AMTR_s00065p00137220 (evm_27.TU.AmTr_v1.0_scaffold00065.91)
 - - - -1.37 -0.58 - -2.99 - -4.02 -1.41 0.66 2.49 0.45 -0.82 1.42 1.92 0.67 0.3 0.23 -1.47 - -1.25
AMTR_s00066p00178850 (evm_27.TU.AmTr_v1.0_scaffold00066.218)
 - - - - -3.17 - - - -5.74 - 1.58 1.64 0.59 -5.82 - 1.53 2.18 1.03 1.12 -1.74 0.87 -1.12
AMTR_s00069p00181050 (evm_27.TU.AmTr_v1.0_scaffold00069.175)
 -7.18 -7.01 1.32 -1.35 -1.47 - -1.02 0.61 0.51 0.28 1.23 1.38 -0.57 -2.26 -0.38 -3.0 1.51 1.2 0.33 -2.07 -1.73 -1.27
AMTR_s00072p00163640 (evm_27.TU.AmTr_v1.0_scaffold00072.106)
 - - - 2.47 0.72 - -2.18 - -1.97 - 1.64 - -0.68 -0.63 1.47 - 0.28 2.23 - -0.72 - -0.63
2.17 - - - 2.22 - - - - - - - -0.45 -0.73 -0.21 - -0.02 2.12 - -0.56 2.21 -
AMTR_s00080p00175080 (evm_27.TU.AmTr_v1.0_scaffold00080.92)
 - - - - 3.77 - - - - - - - 3.06 - - - - - - - - -
AMTR_s00081p00045240 (evm_27.TU.AmTr_v1.0_scaffold00081.16)
 - - - 0.81 1.29 - -1.96 - -3.59 -0.65 2.44 1.87 -0.93 -0.71 0.03 1.31 -0.11 - - -0.36 - 0.52
AMTR_s00085p00077130 (evm_27.TU.AmTr_v1.0_scaffold00085.39)
 - - - - 0.76 - -1.48 -0.07 -0.66 -2.18 -0.29 1.5 - -2.17 0.65 - 0.44 2.89 0.14 - 1.15 -0.65
AMTR_s00085p00093460 (evm_27.TU.AmTr_v1.0_scaffold00085.49)
 - - - - - - 0.53 - - - - - 1.58 1.96 3.06 - - - - - - 2.42
AMTR_s00096p00109680 (evm_27.TU.AmTr_v1.0_scaffold00096.67)
 - - - - 2.77 - 2.03 - 2.79 1.83 - - - - -0.75 - - - - - - -
AMTR_s00097p00112990 (evm_27.TU.AmTr_v1.0_scaffold00097.24)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00105p00072830 (evm_27.TU.AmTr_v1.0_scaffold00105.35)
 - - - - 0.95 - -0.5 - 0.06 - 2.53 - -0.47 0.6 1.22 - 2.33 - - - - 1.56
AMTR_s00108p00116800 (evm_27.TU.AmTr_v1.0_scaffold00108.29)
 - - - - - - - - - - 4.15 - 0.11 0.5 0.8 - - - - - - -
AMTR_s00110p00153150 (evm_27.TU.AmTr_v1.0_scaffold00110.129)
 - - - - 1.35 - -1.41 - - - 1.38 - 1.5 -1.77 1.45 2.59 - - - 0.96 - 1.4
AMTR_s00114p00020320 (evm_27.TU.AmTr_v1.0_scaffold00114.5)
 - - - - 0.77 - -1.04 - -1.5 - 1.85 - 1.14 -0.58 -0.38 - 0.61 - 2.89 0.99 - 0.35
AMTR_s00124p00016870 (evm_27.TU.AmTr_v1.0_scaffold00124.1)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00141p00076480 (evm_27.TU.AmTr_v1.0_scaffold00141.22)
 - - - -0.99 1.77 - - - -2.41 - - - -1.36 -0.06 1.49 - - - 2.82 2.45 - 0.34
AMTR_s00141p00099390 (evm_27.TU.AmTr_v1.0_scaffold00141.34)
 - - - -1.7 - - - - - -4.35 3.36 -1.48 -2.84 -3.09 -5.23 - -3.46 - 0.67 0.93 -0.24 2.66
AMTR_s00143p00063650 (evm_27.TU.AmTr_v1.0_scaffold00143.13)
 - - 0.13 -0.51 1.09 - -1.72 - -2.14 -1.21 1.42 0.6 0.11 -0.28 0.37 - 1.96 -0.38 -1.36 -0.59 1.72 -0.5
AMTR_s00144p00086380 (evm_27.TU.AmTr_v1.0_scaffold00144.45)
 - - - - - - - - - - 2.22 - -0.83 - 1.13 - 3.87 - - - - -
AMTR_s00144p00100340 (evm_27.TU.AmTr_v1.0_scaffold00144.57)
 - - - - -4.36 - - - -0.55 0.28 2.46 -0.31 - -3.82 -0.27 - - - 0.1 -0.5 - 3.47
AMTR_s00152p00042360 (evm_27.TU.AmTr_v1.0_scaffold00152.10)
 - - - - - - - - - - 3.3 - - 1.22 -0.38 - - - - 0.65 - 2.9
AMTR_s00155p00081490 (evm_27.TU.AmTr_v1.0_scaffold00155.53)
 - - - - - - - - 0.11 - - - - 0.35 3.82 - - - - 1.37 - 1.53
AMTR_s00203p00034330 (evm_27.TU.AmTr_v1.0_scaffold00203.15)
 - - - -1.35 1.79 - 0.99 - -1.58 -1.24 - - 0.05 -2.63 3.1 - 2.13 - - 0.31 - -
AMTR_s00231p00020500 (evm_27.TU.AmTr_v1.0_scaffold00231.1)
 - - - - - - - - - 1.97 - - 2.7 - 3.53 - - - - - - -
AMTR_s00236p00014620 (evm_27.TU.AmTr_v1.0_scaffold00236.1)
 - - - -1.79 - - - 0.48 - - - - -9.62 - - 2.87 - - - 0.77 3.39 -0.28
AMTR_s00268p00005320 (evm_27.TU.AmTr_v1.0_scaffold00268.1)
 - - - - -1.14 - -2.68 - -1.71 - 1.39 - 0.31 -0.29 1.62 2.01 1.44 1.39 0.41 0.11 - 0.65
AMTR_s00655p00011590 (evm_27.TU.AmTr_v1.0_scaffold00655.1)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s01006p00010800 (evm_27.TU.AmTr_v1.0_scaffold01006.2)
 - - - - -1.16 - -2.91 - -1.43 -1.69 1.3 - 1.88 1.23 -0.14 2.52 0.36 1.3 - -0.98 - 0.45
AMTR_s02649p00008790 (evm_27.TU.AmTr_v1.0_scaffold02649.1)
 - - - -1.12 4.05 - - - - -2.11 - - 1.83 - 0.29 - - - - - - -
AMTR_s03113p00000150 (evm_27.TU.AmTr_v1.0_scaffold03113.1)
 - - - - 2.51 - - - -1.1 -1.6 - - 1.06 -1.23 0.4 - 2.45 - - 0.48 - 2.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.