Heatmap: Cluster_250 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-1.91 2.43 -4.41 2.48 1.71 2.58 -2.0 -2.19 - -5.17 3.46 0.76 - 2.74 - - - -1.88 0.13 -1.14 -3.55 -6.62 -3.82 -3.52 -0.48 0.87 -0.31 - - -1.73 -1.64 -1.83 -0.57 -2.2 - -1.15 - - - -6.1 -3.08 -5.34 -3.32 -1.02 - -2.56 - - -
-2.82 3.28 -5.33 2.99 0.98 1.15 -1.35 -0.78 - -4.53 2.07 0.03 -1.7 3.99 - - -3.85 -2.15 - -2.01 -3.62 -2.87 -2.43 -5.25 - -2.48 -2.3 - -2.13 - -1.0 -1.4 - - - - -0.57 -2.3 -1.55 -5.62 - -4.83 -3.57 -1.64 - - -1.36 - -
0.3 4.21 - - -0.5 -0.59 - - 0.63 - 2.39 -1.34 0.23 0.76 - - 0.25 -0.57 - -0.25 -1.23 - -2.69 -1.19 - - - - - 0.47 - -1.69 - - - - - 1.75 - -0.76 -1.38 0.1 1.31 -0.28 -0.2 - 1.47 - -
-1.04 -0.12 0.04 -4.33 - - 0.06 -3.62 - -1.65 3.94 - - -3.37 - - - -5.58 1.86 1.37 -2.58 -5.72 -5.73 - 3.2 - - - -2.04 - -1.91 -1.81 - - - - - - - -4.12 -5.19 - - 2.11 -1.24 - 2.97 -0.89 -
-1.93 4.04 -0.16 - - - - - 0.44 - 1.86 - - 4.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.84 3.58 -1.39 0.59 -0.04 1.07 1.34 0.15 -1.22 - 1.34 2.63 1.46 2.12 - - - -0.1 - -3.46 - - -2.72 - - - 1.53 0.91 - - 0.76 -1.23 - - - - - - - - - -1.67 - -1.25 1.65 - - - -
-3.15 0.46 -5.21 - - - 0.89 - -1.21 1.57 4.5 3.1 0.08 0.58 - - - -0.26 0.0 -2.31 -3.4 -4.6 -3.98 -5.26 1.22 - - - - -2.61 -2.77 -4.76 -1.08 -0.78 -1.52 0.29 - - - -6.25 - - - -2.56 -0.98 -2.92 - - -3.24
1.07 4.75 - - - 1.71 - 0.05 - -0.93 2.59 - - 2.24 - - - -0.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.89 - - -
-1.32 3.38 - - - 0.34 - - 1.43 -3.5 1.44 - - - - - - - 4.81 - -2.87 - -3.5 -2.25 - - - - - - - -0.96 - - - -0.07 - - - - -2.4 -2.8 - 0.28 - - - - -
-1.08 2.46 - - - 0.16 - - - 2.37 4.12 -0.47 - - - - -2.3 - 3.82 - -2.61 - -1.49 1.89 - - - - - - - - - - - - - - - - - - - - - - - - -
-4.4 -0.61 - 1.59 -2.42 -0.18 2.27 3.42 -4.0 -2.73 1.69 1.8 -1.0 0.16 0.63 0.79 - -0.43 - 0.24 -2.16 0.14 -0.96 0.25 0.16 1.38 -1.86 -3.46 -1.26 -0.67 -1.78 -2.65 -1.96 -2.22 -1.16 -1.23 -1.72 -0.57 -1.56 -1.01 -1.12 -1.16 -0.79 -0.81 -0.35 -2.6 -3.16 -4.08 -
1.0 4.1 2.69 - - - - - - 1.27 3.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.65 - - 2.76 - -
-1.73 3.14 - 0.29 - - - -0.17 - 1.18 4.74 1.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.6 - - - - -
1.42 3.64 -1.16 -1.81 - -0.08 - -2.68 -0.28 1.66 2.75 -0.09 - 0.35 - - -1.25 -1.49 - -3.68 -1.63 -1.43 -1.6 -1.41 - - - - - 0.78 - -0.38 0.78 2.0 0.61 - - - - - -3.0 -1.04 -0.63 0.43 0.23 0.25 1.07 - -
-1.85 2.16 -1.8 -3.92 -5.22 0.84 -0.64 -0.33 -2.58 1.77 3.49 -6.45 -1.61 1.1 - - -0.19 0.36 - -1.46 -0.47 -6.39 -1.63 -5.04 - -3.84 - -0.54 -1.75 -0.55 -1.43 -0.0 -1.47 -1.83 0.16 0.13 -0.29 -0.6 0.22 0.9 0.29 1.24 1.29 -1.32 0.61 -0.45 -1.65 -2.38 -3.37
-2.69 3.55 -4.29 -2.32 0.38 3.97 -2.29 -0.28 0.5 -2.48 1.96 -0.93 -1.19 -0.45 - - -0.42 0.06 - -0.68 -2.63 -5.73 -1.48 -2.24 -0.85 0.29 -2.29 - - - -2.06 -0.59 - - -1.8 - -1.02 -1.61 -2.31 -1.46 -2.12 -0.77 -0.7 0.67 - - -0.89 -1.52 -
-0.7 3.85 - - - - - - - -0.85 3.73 2.1 - - - - 0.5 -0.87 - - - - -0.72 - - - - - - - - - - - - - 3.73 - - - - - - - - - - - -
-2.56 1.37 -4.05 -9.64 -8.59 - -0.8 -1.06 -2.56 0.25 1.77 -1.15 -0.52 2.22 -4.47 -5.54 -3.25 -0.29 0.36 -0.01 0.41 -0.35 1.1 0.12 -2.7 -1.31 -4.65 -0.26 0.24 2.08 1.8 1.3 -0.05 -2.82 -2.12 -0.07 -1.44 0.76 -0.05 -0.78 -1.32 -0.98 -1.68 0.99 0.99 1.03 -5.74 - -
-4.03 0.95 -2.42 - - -0.63 - - - 2.05 4.05 4.07 -0.73 -0.48 - - - -1.81 - -1.08 - - - - - 0.03 1.18 - - - - - - - - - - - - - - - - -4.57 1.59 -1.73 - - -
- 3.95 -2.46 - 2.7 2.63 - - - - 2.14 - - 1.32 - - - - - - -1.46 - -2.55 -2.37 2.04 3.08 - - - - - -1.06 - - - - - - - - - - - - - - - - -
-2.54 0.89 -3.11 -2.0 - - - -4.96 -0.19 0.9 3.62 1.16 1.48 -2.12 2.41 1.75 -3.48 -1.21 2.11 1.66 -2.87 -5.71 - -0.85 - - - - - -1.5 2.01 0.18 - - -0.41 - - - -0.92 - - -2.9 - 0.84 -2.36 - - - -
-1.27 2.19 - - - - - - -1.38 - 1.42 -0.18 -0.57 0.25 - - -2.38 -1.46 - - - - - -2.94 4.72 - - - - - - -1.48 - - - - - - - - - - - -3.47 3.14 0.95 - - -
- 4.31 - - - - - - - - 3.7 - - 3.9 - - - -1.62 - - - -0.95 - - - - - - - - - - - - - - - - - - - - - -1.44 - - - - -
0.03 3.89 - - - 1.51 - - - 3.1 3.71 - - 2.78 - - - - - - - -1.09 - - - - - - - - - 0.41 - - - - - - - - - - - - - - - - -
-2.15 4.42 -4.28 -5.03 - -2.76 -1.69 -2.1 -1.89 -2.88 2.24 -3.45 -2.04 0.15 - -0.74 -2.71 0.0 - -0.52 -3.06 -1.5 -2.34 -1.94 - -1.62 -1.08 -2.88 -2.31 - -1.44 -4.8 -2.84 -2.36 - - -1.97 0.22 -2.36 -2.36 -3.94 -4.26 -2.93 -0.24 2.56 0.2 1.86 0.01 -2.69
0.19 3.44 -0.68 1.46 2.06 2.31 -0.82 -1.67 -1.23 1.2 2.81 -0.58 -3.27 -1.09 - -0.2 -2.5 -0.87 - -1.8 -3.12 -2.36 -4.7 - 1.34 - -2.51 -2.13 - -2.11 -2.63 -3.37 - - -2.28 -2.34 - - - -2.88 -4.05 -1.86 -1.57 -0.76 2.16 -1.43 -2.47 -2.99 -
- -0.11 -1.01 -1.53 -0.23 - -3.22 2.05 -2.06 0.44 4.19 - - 3.71 - - - - - -3.48 -1.73 - -2.81 -2.14 - - - - - - - -0.44 - - - - - - 1.28 -0.14 -1.08 -0.22 0.59 - -0.24 -0.72 -22.78 - -
-1.03 2.92 -1.61 -1.87 -3.35 -1.29 -1.47 -1.45 -0.81 0.23 3.5 -1.79 0.82 1.36 - -1.43 -0.79 0.5 -0.73 -0.9 -1.63 -1.46 -2.18 -1.42 0.21 -1.2 -0.93 -2.58 -2.01 2.15 0.4 -0.18 -0.82 0.74 -1.37 -0.6 -3.67 -2.81 -0.98 -3.41 -3.13 -4.55 -2.32 0.07 -1.6 -3.03 -0.44 -2.14 -0.89
-0.96 3.01 - - - 0.3 - -2.3 -0.84 -0.54 5.17 - - - - - - 0.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.98 -0.07 - -0.35 0.31 - 0.39 -0.83 -2.53 2.41 2.71 0.01 2.1 - - 1.89 -1.1 - -0.95 -2.05 -3.05 -1.87 -1.3 - - - - - - - - - - - - - - - -2.4 - - -0.77 -2.98 1.67 0.29 - - -
-1.44 4.15 -1.9 - - - - - 0.75 - 2.93 - 0.41 3.18 - - -0.43 -0.02 - -0.53 - -2.0 -1.94 -1.81 - 1.32 - - - - - -0.5 - - - - - - - - - - - - 2.16 - - - -
-1.79 2.97 - - - - - - -1.61 1.75 3.83 2.09 - 1.47 - - -1.56 - - -2.69 -1.94 - - -2.34 - - 0.14 - - - - -1.62 2.13 2.71 0.37 0.31 - - - - -3.29 - - - - - - - -
-3.05 2.8 - 3.23 4.12 0.27 -0.33 - -1.06 -0.98 2.98 - - 2.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.96 2.28 -2.15 -1.55 1.2 4.37 - -0.74 0.75 - 2.89 -0.11 - 0.14 - - - -4.68 - -1.69 -3.96 -3.71 -2.22 2.42 - -0.29 - - - - - -1.11 - - - -0.22 - - - - - - -2.52 -4.1 - - - - -
-1.28 3.41 - 1.21 -3.92 - 3.0 2.88 -3.26 -3.77 0.29 -1.76 - -1.12 - - -4.78 -2.86 - - -5.36 - - -0.8 -0.12 -0.46 - - - - - 0.26 - - - - - - - -3.72 - - - 1.94 2.39 2.23 -0.78 - -
0.44 2.72 -1.58 -0.87 0.23 1.57 -1.23 -1.23 - 0.4 1.95 - -1.6 1.3 - - 0.61 -1.73 - -0.09 - -4.39 -2.77 -2.63 2.91 - - -0.6 - - - -0.93 - - - - - - - - - - - -0.26 0.74 0.08 0.76 2.92 1.33
1.07 4.1 - 0.22 0.37 - -0.24 - - - 3.09 - - - - - -0.41 - - -2.41 - 0.78 - - - - - - - - - - - - - - - - - - - - - 3.93 - - - - -
-1.41 3.71 - -1.62 -0.19 - - - 1.13 -2.73 1.04 - - -0.66 1.84 - - -1.56 - -1.96 - - -2.9 - 2.96 - - - - - 0.8 - - - - - - - - - -2.72 - - -2.36 - - 3.66 1.34 -
0.35 4.16 1.18 - - 1.89 1.06 -1.99 3.05 - 2.91 - - - - - - - - - - -2.19 -2.23 -0.0 - - - - - - - 2.12 - - - - - - - - - - - - - - - - -
1.1 4.49 - - - - -1.71 - 1.4 0.64 3.52 0.9 - 0.13 - - -1.73 - - - - - - -0.71 - - - - - - - 2.19 - - - - - - - - - - - - - - - - -
0.63 3.81 0.01 - - 0.28 -0.39 -0.97 1.27 1.58 2.42 1.03 1.61 -0.14 - - 0.2 -2.46 - 1.67 -2.82 -2.42 - - - 0.83 1.08 - - - - - - - - - - - - -1.98 -2.21 - -0.22 -1.2 0.6 0.17 - - -
-3.78 1.13 -2.44 -2.31 - 1.2 -3.44 -3.01 -5.2 2.06 4.69 - -1.3 1.61 - - -4.55 -2.68 - -4.32 -3.13 - -3.83 -3.57 0.17 -2.32 - - -2.87 - - -0.69 -0.79 -2.93 -1.99 -2.24 - -3.11 -3.32 -1.48 -1.73 -0.69 -0.93 -3.34 1.66 0.2 - -3.47 -
-0.13 3.33 -0.65 -1.76 -2.09 2.08 -0.24 -2.76 -1.05 -2.39 1.67 -0.21 -1.45 2.49 - - -3.51 1.03 - 1.68 -2.5 -1.08 -0.89 -2.01 - 2.56 1.18 - - - - -0.56 - - - - - - - - -3.87 -3.47 - 0.16 1.2 0.24 - -1.94 -1.81
-2.84 2.01 -2.7 -1.17 - 0.45 - -4.93 0.53 -0.19 5.08 0.1 0.24 -1.51 - - - -4.51 - -3.38 - - -6.15 -3.94 - -0.81 - -1.71 - - - -3.63 - - -1.64 - - - - -5.43 -5.63 - - -4.04 -0.92 -0.89 0.4 - -
0.05 2.35 1.67 - - - 0.43 0.87 -0.35 -1.07 4.35 0.72 -0.12 -0.28 - - 1.73 0.65 - -1.1 -4.47 - -5.87 -5.47 -1.14 -0.82 -0.72 -3.14 - -3.13 - -2.89 - - - -3.4 -2.26 - - -4.39 -3.17 -3.21 -4.33 -2.42 -0.16 -1.09 -2.57 0.44 -1.77
- 2.88 - - - - - - -0.18 1.48 1.88 - - 0.91 - - 0.41 - - - - - -1.81 - - - - - - - - 0.81 - - - - - - - - -1.89 - - 1.28 1.48 - - 1.09 4.42
1.7 2.62 1.74 -0.22 -1.51 - -1.32 -0.59 -3.41 0.49 2.58 -1.12 0.93 -0.74 - - -0.59 -0.7 2.24 -2.95 - -2.9 - -3.93 1.98 -0.79 -0.78 - - - - -1.43 - - -1.28 - -1.49 - - -2.67 - -4.23 - 0.08 1.53 0.69 1.76 -0.17 -0.19
1.52 1.58 -2.56 - - - - - -2.38 -4.24 4.98 1.89 - 0.03 - - - -2.17 - -3.28 - - - -5.01 2.21 -1.88 - - - -1.54 - -3.7 - - - - - - - -5.33 -5.62 -4.56 - - -0.47 - - - -
-5.93 1.27 -1.88 -5.43 -4.19 0.66 -1.56 -8.46 -1.03 0.65 5.18 1.35 -1.97 -2.52 - - -8.71 -2.0 - -3.55 -4.28 -7.5 -5.52 -7.45 -1.22 -5.46 -4.43 - -2.47 -4.0 -4.17 -2.93 -3.41 -3.25 -4.91 -3.26 -2.75 -4.72 -4.03 -7.12 -7.25 -4.6 -4.97 -3.9 -0.87 -2.09 -4.71 - -5.64
-1.88 0.42 - - - 2.09 - - - 3.49 4.53 1.56 - 1.04 - - - - - -0.5 - - - - - - - - - - - 1.5 - - - - - - - - - - - -2.49 - - - - -
-8.61 -0.16 - - -3.76 -2.97 -2.05 -7.92 - 2.46 4.68 3.5 -2.65 -2.18 - - - -3.89 - -2.55 -5.59 -6.17 -7.0 -6.68 - -1.79 -0.94 - -3.13 -1.0 -3.04 -1.59 -4.46 -1.25 -4.37 -3.73 - -3.93 - -8.09 -6.75 -6.96 -5.25 -3.06 0.49 -3.48 -2.66 -3.59 -3.1
0.35 2.98 -2.13 -0.47 -2.47 -0.57 -0.28 -0.2 0.61 2.18 2.35 -4.3 -0.22 0.77 -0.04 - 1.42 -0.81 0.69 0.6 -2.84 -4.99 -5.98 -5.38 - - - -2.16 - -1.04 -2.08 - -1.91 - - - - - -2.34 -3.09 -2.19 -3.64 -3.07 1.61 -0.94 -1.13 2.11 0.93 1.49
- 3.18 - 1.97 1.74 1.48 2.39 1.72 - -1.23 1.87 -0.0 - 1.78 - - - -1.79 - -1.33 -4.02 - - - - - - 0.37 - - - - - - 0.48 1.73 - - - - -2.44 - - -3.76 - - 2.54 - -
- 3.11 - - - - - - - - 4.19 - - -20.05 - - - -1.52 - - - - - - 4.12 - - - - - - 1.92 - - - - - - - - -0.86 - - - - - - - -
0.74 3.8 - - - - - - 2.17 1.88 3.78 1.12 - - - - - - - 0.59 -1.89 -2.09 -1.18 -2.43 - 1.47 - - - - - -0.35 - - - - - - - -1.82 -0.24 - -0.08 0.1 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.