Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.01 0.15 4.71 -6.66 - -0.4 0.54 -3.63 -2.8 -2.73 4.15 - - -4.04 - - -4.14 -2.1 - - - -8.32 - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.68 4.08 -0.79 - - - 2.62 - - - 3.05 - - -0.37 - - - - 3.49 - -2.81 - - -1.58 - - - - - - - 1.05 - - - - - 1.16 - - - - - -3.26 - - - - -
0.53 1.48 -5.99 - -6.01 - -0.48 -5.37 3.33 2.68 4.62 -5.19 - -5.12 - - -5.55 -6.83 1.12 -3.02 - -7.23 - -6.11 - -2.25 -2.28 - - - - - - - - - - - - - -7.33 - - -4.85 - - - - -
-2.81 0.56 -0.7 - - - 2.42 -4.97 - 4.53 3.93 - - - - - - -6.04 - - - - - - - - - - - - - -1.22 - - - - - - - -2.5 -3.95 -3.53 -4.43 -3.69 - - 0.69 -1.14 -
-0.88 2.14 - - - - 4.16 - -2.01 -0.5 4.43 -1.86 - - - - - - - - -1.89 -3.76 -2.42 -2.67 - - - - - - - -0.17 - - - -0.28 - - - -3.34 -2.48 -0.61 - - - - - - -
-5.27 -0.05 -3.87 - - - -0.31 - - -0.04 5.53 - - - - - - - - - -4.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.33 0.47 0.91 -5.45 - - 0.7 -2.42 -3.98 4.25 4.59 -3.0 - - - - -5.36 - - - -6.67 - -6.64 -7.08 - - - - - - - -3.42 - - - - - - - - - - - - - - -3.2 - -
0.44 0.6 0.86 1.67 0.67 -2.25 1.62 1.6 2.07 2.73 3.12 -3.3 0.05 1.62 -4.22 -4.24 1.57 0.57 -1.95 -2.02 -4.38 -5.5 -4.74 -7.27 -0.87 -5.07 -6.61 -6.39 -4.41 -6.14 -5.31 -3.09 -5.34 -4.39 -4.18 -3.8 - -5.19 -3.78 -4.47 -3.92 -5.56 -3.86 -0.16 -3.54 -1.07 -0.18 -0.9 -2.97
2.77 0.7 3.44 - -1.81 - -0.1 -2.41 -0.05 3.46 4.0 - - - - - -2.01 - - - - - - - - - - - - - - - - - - - - - - - - - - -3.11 - - - - -
- 0.52 -2.8 - - -4.58 0.28 - -5.73 4.53 4.29 - - - - - - - - -7.15 -7.43 - - -7.2 - -0.41 - - - - - -5.89 - - - - - - - - - - - 1.39 - - - - -
-1.28 1.67 0.98 - -0.77 1.98 -2.35 - -1.04 2.84 4.28 - - - - 2.63 - -5.93 - - - -4.1 -3.82 -1.77 1.15 - - - - - - 0.76 - - - - - - - - - - -1.78 - - - -0.42 - -
0.85 -3.4 -1.93 -4.48 -4.87 -1.53 1.59 -2.08 -4.5 -6.52 4.32 -1.68 -2.4 -1.56 -5.48 -6.45 -5.28 -3.44 1.89 -4.54 -6.37 -6.07 -6.28 -7.03 -5.83 -5.59 -5.18 -5.75 -5.45 -6.06 -9.87 -7.58 -5.96 -6.27 -6.29 -8.01 -7.24 -5.74 -6.67 -3.62 -3.85 -3.52 -4.01 -2.14 -0.49 0.28 3.83 -0.41 -0.43
0.6 -0.77 2.18 -0.53 -1.01 1.49 1.24 1.84 -1.76 2.37 3.41 -3.43 0.99 0.52 - - -3.09 -0.15 0.78 -1.81 -2.71 -4.21 -2.98 -3.38 -1.78 -1.61 -2.26 -1.95 - -2.82 - -4.98 - - - -3.05 -2.95 - - -4.35 -4.67 -4.73 -3.96 0.73 1.2 0.94 -1.31 -0.23 -1.0
-5.16 -1.24 -3.15 - -2.86 - -2.91 -3.1 -4.63 5.04 3.64 -1.1 -2.47 -3.57 - - -4.99 -2.83 - -5.29 -5.46 -3.89 -4.57 -3.83 -1.28 - - -2.56 - - - -2.48 - -2.04 - - - - - -5.84 -5.01 - -4.09 -4.17 - -3.63 -2.68 - -
-0.74 2.83 - - - - 0.85 -2.2 -0.41 3.77 3.75 0.66 -1.42 - - - -1.99 -3.66 2.25 -7.39 -4.39 - - -3.09 - - -0.69 - - - - -1.49 - - -0.5 - - - - - - - -3.05 -0.43 0.3 -1.21 - - -
-3.95 1.28 -0.37 2.98 -4.07 - - -4.67 -3.19 4.36 3.58 - - 2.14 - - - - - - - - - -4.68 - -1.74 - - - - - - -1.41 - - - - - - - - - - -5.36 - - - - -
-2.99 1.23 - - - - 3.42 - -0.64 1.03 5.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.79 2.71 - - - - 3.84 - - -1.74 4.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.43 1.33 1.65
1.87 2.13 1.75 - -1.77 - 0.95 -0.52 -3.12 3.31 4.22 -1.22 -0.93 0.26 - - -3.86 -0.58 - - - -4.76 - - - -1.14 - - - - - - - - - - - - - - - - - -2.15 0.13 -0.16 -1.16 - -
-1.22 0.7 -3.51 - - - 0.43 -1.57 4.0 -0.13 4.74 -4.02 -3.75 -2.78 -0.26 - - -3.01 - -3.97 - -4.72 -6.18 -6.72 - - - - - - - - - - - - - - - - - - -5.0 - - -3.49 - - -
-1.17 2.21 -2.72 - -1.32 -0.5 1.97 - - 2.46 4.78 -1.29 - - - - - -2.89 - - - -4.41 -4.37 -0.89 - 1.76 - - - - - -0.01 - - - - - - - - - - -2.47 -3.36 - - - - -
-3.3 1.45 1.14 - - - 0.37 - -0.17 3.87 4.54 - - -0.01 - - -1.83 - - -4.02 -4.28 - - -2.25 - - - - - - - -0.06 - - - - - - - - -3.94 - - -3.71 -0.67 -0.75 - - -
0.2 -0.21 0.78 -2.92 -3.28 1.44 1.23 0.05 - -0.44 3.16 - 2.43 1.79 -1.24 1.38 - -2.91 - 2.35 -1.53 -5.19 -1.54 -4.39 - -0.69 0.05 - - -1.38 -1.64 -1.03 - -1.95 -2.03 - -2.24 -2.59 - -2.71 -3.53 -2.2 -2.98 1.79 - -2.0 -2.47 - 1.67
-1.49 0.63 1.89 - -2.11 1.42 1.44 -4.6 0.14 3.47 4.31 - - 0.13 - - -4.2 -4.31 - - -2.19 -2.78 -4.8 -1.42 - -0.57 - -1.39 - - -1.31 -1.3 -0.14 - - -1.42 -1.27 - - - -4.7 -3.74 -3.91 - - - - - -
-7.34 -0.25 -2.09 2.14 -2.02 - 1.77 1.15 - 4.07 4.38 - - - - - - -10.7 - -7.81 - - - - - -3.99 - - - - - - - - - - - - - -9.85 -10.37 - - -8.11 - - - - -
-0.76 -1.71 -1.29 - -5.73 - 0.5 -2.83 -3.65 4.45 3.46 -5.0 -0.29 -0.86 - - -2.6 0.28 - -3.26 -2.36 -5.27 -2.93 -2.47 -1.01 -3.01 -3.58 -2.69 -2.57 -3.35 -3.57 -1.84 -4.96 -1.96 -2.17 -1.56 -2.14 -1.57 -3.1 -2.75 -3.99 -2.78 -4.39 -4.67 -5.65 -3.05 2.43 -0.52 -5.4
0.37 0.97 -0.31 - - - 1.06 -0.39 3.59 -1.59 3.44 -2.17 1.23 2.46 -6.21 -6.21 1.79 2.45 -2.18 -5.93 -3.82 -3.42 -4.42 -3.35 -3.01 -6.63 -6.19 -3.49 -5.82 -4.58 -5.48 -5.65 -4.08 -6.32 -4.53 -2.59 -3.75 -2.8 -3.23 -8.67 -7.46 -8.16 -7.99 -2.82 -6.06 -5.11 -2.73 -4.2 -4.94
-2.6 -0.82 - - - - 1.99 - - -0.23 5.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.84 -1.12 - -1.71 - - 2.53 - - - 5.35 0.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.43 - - - - - - -
-1.87 1.66 2.99 - - - 3.73 - - - 4.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.21 1.03 - - - - - - - 4.43 4.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.11 0.38 - -3.45 - 3.87 - - -3.05 3.32 3.24 - - - - - - - 3.61 -4.07 -4.42 -4.66 - -3.47 - - - - - - - -0.57 - - - - - - - -3.48 - - -3.88 -2.57 - - - - -
-0.27 -0.17 1.05 - -5.01 -1.43 -1.39 -5.96 -1.13 -0.23 3.14 -3.71 0.01 1.44 -0.03 -2.6 -1.18 2.11 1.69 -0.76 -2.39 -2.32 -2.42 -1.74 0.34 -1.85 - -2.0 -1.45 - -2.31 -5.66 -1.04 -3.33 - -1.76 -1.78 -3.97 -3.92 -5.24 -5.76 -4.62 -4.96 -2.06 -1.67 0.34 1.63 2.98 1.73
-5.23 2.3 - - - - 1.69 - -0.34 1.47 3.24 - - 4.77 - - - - - - - - - -3.51 - - - - - - - -2.2 - - - - - - - - - - -2.71 - - - - - -
-0.85 1.82 -0.35 -1.67 -0.92 0.26 1.12 0.86 2.93 1.4 2.38 0.08 0.61 1.12 - -1.52 1.59 0.55 - -1.13 -1.63 -3.81 -2.93 -2.31 0.16 -1.55 -0.66 -3.43 -2.13 -1.91 -1.39 -0.42 -3.61 -3.14 -2.45 -1.07 -2.64 - -2.25 -1.26 -0.3 -0.86 -0.7 0.51 0.12 -1.38 -0.5 -1.17 -1.24
2.54 1.42 1.0 0.31 -1.28 -0.22 -1.89 -1.88 2.17 1.85 3.14 - - -3.06 - 1.79 -1.73 -0.6 - 1.4 - -4.42 - - -0.49 0.42 -0.83 - - - - - - - - - - - - - - -1.33 -1.11 -0.43 -0.29 0.2 0.13 1.63 -0.07
-7.04 -0.89 - - - - -0.9 -3.77 - 4.27 4.11 -5.87 -3.18 3.32 - - - -7.01 - -5.37 - - - -6.44 -0.16 - - - - - - -5.64 - - - - - - -3.9 - - - - - -3.97 - - - -
-2.1 0.78 0.62 -3.04 - - 5.05 - - 2.51 2.63 - - - - - -4.12 - - - - - - - - - - - - - - -1.61 - - - - - - - -4.09 - - - - - - - - -
-1.77 -0.04 2.2 0.77 3.49 1.25 0.69 -0.59 1.06 -7.0 2.35 0.21 - -3.35 -2.46 - -2.85 -2.36 -0.53 -2.7 -3.2 -3.53 -3.51 -4.1 -1.35 -2.83 -3.81 -3.58 - -3.6 - -4.5 -3.34 -3.06 -3.25 - -2.67 -2.81 - -4.3 -3.52 -3.59 -3.01 -4.11 -2.86 0.09 0.75 2.33 2.5
-3.17 2.42 -2.8 - -1.35 - 1.8 - - -0.1 5.18 - - 0.1 - - - -2.39 - -7.43 - - - -1.34 - - - - - - - -1.35 - - - - - - - - - - - -2.52 - - - - -
0.2 2.56 - - -1.12 - -2.74 - 0.11 3.72 3.76 - - - - - -2.92 - - - - - - -1.74 - - - - - - - -1.43 - - - - - - - -1.48 - -2.45 - -0.84 2.15 1.43 1.19 1.1 -
1.12 1.22 -0.49 1.15 -1.74 1.64 2.53 0.91 0.66 1.77 3.06 -0.14 0.94 1.15 - - -0.02 1.12 - -4.51 -0.9 -1.52 -1.56 -0.82 - -2.01 -2.15 -0.33 -1.35 -0.8 - -0.83 -1.87 - -0.08 -0.93 -0.8 -2.15 -2.1 -4.33 -4.21 -3.48 -2.96 -4.17 -2.13 -1.55 - -0.8 -
-1.52 1.19 - - - - 1.1 - -0.43 0.46 5.3 - - 0.79 - - - -1.41 - -2.04 - -4.95 - - - - - - - - - -1.79 - - - - - - - - - - - - - - - - -
-0.74 3.16 - - - - 0.98 -1.89 - 0.07 5.13 - - - - - 0.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.03 1.96 1.57 1.19 -2.35 2.52 1.75 0.93 0.71 1.82 4.43 -1.36 -0.65 - - - - - - - -3.9 - -3.32 -1.57 - - - - - - - -1.65 - - - - - - - - - - - - - - - - -
-1.53 2.6 0.84 - - 1.73 - - - 3.59 4.32 - - 0.96 - - - - - - - - - -0.35 - - - - - - - 1.43 - - - - - - - - - - - - - - - - -
1.17 2.12 -1.16 -1.69 -0.85 4.1 -2.97 -1.58 -0.7 -1.94 2.54 0.98 - -0.66 - -0.57 -3.19 -2.42 - -2.57 -1.82 0.72 -1.9 -1.08 - 0.56 -0.34 - - -0.63 -0.54 -0.62 - - - -1.77 -1.83 -1.23 -1.93 -2.06 -3.27 -1.99 -2.5 -2.79 -0.02 1.44 -2.04 - -
-0.87 3.2 -1.44 - - 1.91 3.7 - -1.01 - 4.26 - - - - - - - - -6.22 -2.19 -2.77 - - - - - - - - 0.45 - - - - - - - - - - -1.91 -1.0 - - - - - -
-0.77 2.73 - - - - 4.55 - - - 3.89 - - - - - -2.19 - - - - - - -0.77 - - - - - - - 1.49 - - - - - - - - - - - - - - - - -
-0.67 2.96 -2.26 -1.82 -2.73 3.19 - -3.67 1.49 -0.02 4.2 - - 0.45 - - -1.25 -4.84 - -5.82 -4.27 -2.28 - - - 1.03 - - - - - -0.79 - - - - - - - - - - -3.03 -0.64 0.91 -0.53 -0.75 - -
-1.81 0.88 -0.3 - - - 0.79 - 1.53 4.64 3.65 0.61 - 0.77 - - - - - - - - - - - - - - - - - -0.78 - - - - - - - - - - - -2.77 - - - - -
-5.9 0.53 -0.01 - - - -0.04 -4.34 -1.2 3.36 5.08 -2.57 - -1.2 - - - - - -4.62 - - - - - - - - - - - -1.45 - - - - - - - - -4.0 - - - - - - - -
-1.59 -1.67 -8.27 -7.46 -5.96 -0.33 2.7 -3.63 -0.62 3.87 4.53 -2.4 -2.81 -2.06 - - -3.98 0.12 - -7.76 -6.43 -4.91 -8.25 -5.12 -3.92 -7.61 - -7.47 -6.9 -5.29 -5.92 -5.39 -7.42 -6.95 -5.55 -7.46 - -6.7 -5.26 - - - -9.89 -3.76 -3.54 -1.89 -5.58 - -
-2.37 1.34 - 0.13 -3.0 3.14 2.34 -5.49 -0.97 1.59 4.12 -2.89 - -3.65 - - -3.67 -3.47 0.58 -9.22 - - - -5.5 - -2.41 - - - - - -2.6 - - - - - - - - - - - 1.01 2.21 0.02 -2.56 -2.76 -
-0.82 1.01 -2.17 - - -2.04 1.94 - 3.83 0.62 3.87 -1.28 - 3.07 - - -3.14 - - - -3.03 - - -3.38 - -0.81 - - - - - 0.23 - -0.2 - - - - - - - - - - - - - - -
1.65 1.49 2.55 - - 0.57 3.89 1.91 - -2.28 4.06 - - - - - - - - - - - - -2.04 - - - - - - - - - - - - - - - - - - - - - - - - -
-6.08 -0.7 - -5.59 - -4.05 2.23 - -1.42 4.9 3.7 -5.59 -4.77 -4.45 - - - -8.18 - - - - - -6.42 - -2.58 - - - - - -3.36 - - - - - - - - - - - -4.76 - - - - -
-0.4 0.54 1.69 2.12 2.33 1.4 1.54 0.61 0.81 0.01 2.16 -0.97 -1.9 -1.01 -2.72 -2.71 -2.84 -0.81 -1.03 -3.18 -2.37 -2.22 -2.23 -2.36 -2.6 -1.41 -1.39 -4.24 -1.86 -4.35 -4.03 -1.8 -2.25 -3.0 -2.67 -2.3 -3.9 -2.06 -4.06 -3.9 -2.78 -4.05 -2.97 -2.26 0.86 1.58 0.49 1.6 1.85
0.45 -0.9 1.67 -5.26 - 1.32 4.08 -0.42 - -0.74 4.16 -5.05 -0.58 -1.62 - - -2.42 -1.73 - -9.9 - - - -6.73 - - - - - - -2.82 -3.82 - - - - - - - - - - - - -3.21 - -1.18 1.3 -1.13
2.57 1.36 - - - - 3.98 0.18 -1.17 2.86 3.74 0.02 - - - - - - - -3.67 - -3.2 - - - - - - - - 0.31 - - - - - - - - - - - - - - - - - -
-3.68 2.09 -0.7 - - 4.31 1.91 -1.96 0.66 1.59 3.63 - - -0.13 - - - - - - -2.98 - - -3.65 - 0.16 - - - - - - - - - - - - - - - - - - -0.05 - - - -
- 1.49 - - 2.31 3.41 - - - 2.92 3.98 - - - - - -0.09 - - - - - - - 2.64 - - - - - - - - - - - - - - - - - - -2.93 - - - - -
-4.06 -1.81 -1.23 -5.4 - -7.06 4.66 -2.16 -3.85 3.11 3.42 -1.21 -5.17 -6.76 -4.38 -2.23 -7.38 -3.97 - -5.61 -4.13 -1.03 -3.95 -3.15 - -3.85 -6.29 -5.51 -3.17 -3.65 -4.49 -1.01 -4.95 - -4.26 -2.3 -4.05 -6.33 -3.45 -7.63 -6.16 -7.25 -6.72 -3.76 -2.68 -3.0 - -5.98 -7.49
-2.01 2.0 - - - - 4.11 - - -0.96 4.67 - - - - - - -4.14 - - - - -3.17 -1.35 - - - - - - - -0.05 - - - - - - - - - - - - - - - - -
- 0.14 - - 1.96 - 2.91 - - 4.22 4.14 -5.31 - - - - - -8.19 - - -7.16 - - -4.96 - - - - - - - -4.03 - - - - - - - - - - - - - - - - -
-0.2 2.73 -1.39 - - -0.34 -2.95 - - 0.61 4.93 - - -1.11 - - 1.73 -3.11 - -3.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.75 -0.12
-0.64 2.52 - - - - 0.83 0.65 - - 3.48 - - 1.77 - - - 3.19 - -0.11 -3.01 - -1.41 - - - - - - - - - - - - - - - - -1.44 - - -0.21 3.3 - - 1.58 - -
-0.01 2.97 2.99 - - 2.69 - - -0.29 - 3.03 - - - - - - -2.93 - -6.39 -2.6 0.01 -3.2 -1.83 - 1.93 1.95 - - - - -0.36 - - - - - - - - - - - -1.44 1.3 1.91 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.